Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00215 | ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCTCAGTTGGCGCCGCCAGACAAAGATTTGGTGCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAGGAGCCAACCGAGCATTATGGTTTGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTCCCAGGCGATTACGGGTTCGACCCACTAGGGCTATCGGACCCTGAAGGTACGGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAGTAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAGGGCTAATCCCACAAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACCCTATTTGTACTTGAAATGGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTGTAGAGAGGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTTAAATTTCACTAG | 822 | 49.03 | MATQALVSSSLTSSVGAARQRFGAKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPQETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGVERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 3779146 | 3780558 | - | Cp4.1LG18g02160.1 | Cpe18g00215 | 484676 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00215 | 273 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 269 | - | - | |
Cpe18g00215 | 273 | Pfam | Chlorophyll A-B binding protein | 64 | 242 | IPR022796 | - | |
Cpe18g00215 | 273 | Gene3D | Chlorophyll a/b binding protein domain | 53 | 272 | - | - | |
Cpe18g00215 | 273 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 272 | - | - | |
Cpe18g00215 | 273 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 272 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00215 | Cpe-Chr18:3779146 | Cpe18g00788 | Cpe-Chr18:7444269 | 1.19E-49 | dispersed | |
Cpe18g00215 | Cpe-Chr18:3779146 | Cpe04g00872 | Cpe-Chr4:8010354 | 1.66E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00215 | K08909 | - | csv:101202993 | 513.842 |