Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00224 ATGGGAGTTTCAGGAAAATGGTTCAAAGCGTTAGTTGGTTCGAAGAAGTCAGAAAAATCTCAGTCATCAGAACACGATGAAAACACGAGGACAGCTACCAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATCGATGCAGATAAACTTCAGCACGAGTTTAACTCGAATTTTACACCATTTGTTGAAGAGTCCAATGCTCTTTCAGATCCAGGAACAGCTTCTATTCCTTCTGATTCACTTCAAACATATGATGCATTGCATAATCAACACAACGATATAGAAGAACAGGCCGCGATACGCATCCAAACCATGTTTCGAGGATTTCTGGCTAGAAGAGCTCTCCGAGCTCTCAAGGGATTGGTTAGACTTCAAGCTCTTGTCAGAGGTCATGCTGTCAGGAAACAAGCTGCAATAACTCTACGCTGTATGCAAGCTTTAGTGAGAGTTCAGGCTCGTGTTCGAGCAAGGCATGTACGTATTGCATTGGAAAGTGAGACCGCACAACAAAAACTTCAACAACAAATTGAAAACCAAGCTCGAGTTCGAGAAATTGAAGATGGTTGGTGCGACACTGTTGGATCTGTTGAAGAAATTCAAGCAAAATTGTTAAAAAGGCAGGAGGCTGCTGCTAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGAACAAGACAACAGGCTGCCCTGTTCCAGTTTGAGCCAGATAAAAACAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCGTGGGAAAACCGCTTTCTCGACATCAATCTCAAAGACGGAGTGATGATTCGTGAGAACGGATCAGCTGAGGGCAAAAGTAACACTAAATCTCATATACAAACTACTGGCAAGAAAACAAACTTAGTGACTGATCAACCAAACCTCTCGAGCCAAAGAACCGCTGCCTCGCATTCTGATGGATGTGGTTCGTCGTCCCCGACTAAGTCAGCTGGCATTGTAGAGGTATCCAGTGCACAGGTTCAAAAGCTCAAGCATAAACTTGCACCTGAGAGGCCACTTGAACAAGTCAAACCTAAAGTAGATACCGATCCTGGTAGTCAAAACCGAACGGTGAGAAACTCGACTGGCAAAGCGACCGTTGAACCGAAGCCGATATCAAGAGGTGACTCAAAAGCTGCAAAACCCAGATCACAAAACTGA 1197 45.03 MGVSGKWFKALVGSKKSEKSQSSEHDENTRTATNKFWHRRKHSVDIDADKLQHEFNSNFTPFVEESNALSDPGTASIPSDSLQTYDALHNQHNDIEEQAAIRIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRIALESETAQQKLQQQIENQARVREIEDGWCDTVGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAGTRQQAALFQFEPDKNSWGWNWLERWMAVRPWENRFLDINLKDGVMIRENGSAEGKSNTKSHIQTTGKKTNLVTDQPNLSSQRTAASHSDGCGSSSPTKSAGIVEVSSAQVQKLKHKLAPERPLEQVKPKVDTDPGSQNRTVRNSTGKATVEPKPISRGDSKAAKPRSQN 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3887819 3896686 - Cp4.1LG18g02250.1 Cpe18g00224 484685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00224 398 Gene3D - 93 144 - -
Cpe18g00224 398 MobiDBLite consensus disorder prediction 280 335 - -
Cpe18g00224 398 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Cpe18g00224 398 MobiDBLite consensus disorder prediction 343 357 - -
Cpe18g00224 398 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Cpe18g00224 398 MobiDBLite consensus disorder prediction 14 34 - -
Cpe18g00224 398 SMART iq_5 118 139 IPR000048 GO:0005515
Cpe18g00224 398 SMART iq_5 95 117 IPR000048 GO:0005515
Cpe18g00224 398 MobiDBLite consensus disorder prediction 360 379 - -
Cpe18g00224 398 MobiDBLite consensus disorder prediction 18 34 - -
Cpe18g00224 398 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Cpe18g00224 398 PANTHER IQ-DOMAIN 5-RELATED 2 373 - -
Cpe18g00224 398 PANTHER IQ-DOMAIN 5-RELATED 2 373 - -
Cpe18g00224 398 MobiDBLite consensus disorder prediction 279 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02257 Cpe-Chr1:19147453 Cpe18g00224 Cpe-Chr18:3887819 7.46E-53 dispersed
Cpe02g00266 Cpe-Chr2:1377504 Cpe18g00224 Cpe-Chr18:3887819 8.13E-67 dispersed
Cpe08g01113 Cpe-Chr8:8391889 Cpe18g00224 Cpe-Chr18:3887819 3.70E-17 dispersed
Cpe09g00017 Cpe-Chr9:104901 Cpe18g00224 Cpe-Chr18:3887819 6.13E-38 dispersed
Cpe12g00611 Cpe-Chr12:6065899 Cpe18g00224 Cpe-Chr18:3887819 1.83E-43 dispersed
Cpe13g00819 Cpe-Chr13:7295985 Cpe18g00224 Cpe-Chr18:3887819 1.22E-50 dispersed
Cpe14g00036 Cpe-Chr14:193668 Cpe18g00224 Cpe-Chr18:3887819 3.32E-45 dispersed
Cpe14g00349 Cpe-Chr14:2130909 Cpe18g00224 Cpe-Chr18:3887819 2.54E-35 dispersed
Cpe14g01046 Cpe-Chr14:8772549 Cpe18g00224 Cpe-Chr18:3887819 2.21E-11 dispersed
Cpe18g00224 Cpe-Chr18:3887819 Cpe19g01052 Cpe-Chr19:7252482 1.34E-44 dispersed
Cpe20g00197 Cpe-Chr20:1131548 Cpe18g00224 Cpe-Chr18:3887819 1.46E-21 dispersed
Cpe18g00224 Cpe-Chr18:3887819 Cpe06g00243 Cpe-Chr6:1295976 4.26E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00224 - - csv:101204117 650.588