Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00228 ATGGCGGATTTCCTCATCTCTCTCTTAATCCTCTTCCTCTCCTTCATCTCTCTCACTCTCTTCGTCCTCTTTTACAAGCACAAATCCTTATTCTCATATCCCAACACTCCTCCCGGCGCCATTGGCCTTCCGATCATTGGCGAGAGCCTCGAGTTCTTATCCACCGGCTGGAAAGGCGAGCCTGAGAAGTTCATCTTTGATCGTTTGAATAAGTACAAGTCTGATATCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGCCTGCAACAAGTTCCTCTTCTCCAATGAGAATAAACTCGTTACTTCCTGGTGGCCGGATTCCGTCAACAAGATCTTCCCCGCTTCTACTGAGATCAACTCAAAAGAGTCAGCTATACGACTTAAGAAGCTCCTCCCGCGGTTCCTTAAACCGGAAGCGCTCCAGCGTTATATTGGAGTCATGGACGAACTTGCTCAACGCCATTTCGCTTCCTCCTGGGAGAACAGAGAACAAGTCCTCGTGTTTCCTCTAGCGAAAAGTTTCACATTCTCGCTCGCGTGCCGATTGTTCGTGAGCCTAGAGGATCGTATCCACGTCGAAAGATTGTCGGAACCATTCCAGAACATTGCGGCAGGAATCATATCGATGCCGATCGATTTGCCAGGAACGCCGTTCAACCGAGCGATTAAGGCGTCAAACTTCGTCAGAAAGGAACTACTCTCGATCGTGAGGCAGAGGAAATCGGATCTGGCTGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACCTGCGATGAAATCGGACAGTACATGAACGAATCTGCTATCGCCGATAACATTCTCGGCTTGTTGATAGGCGGCCATGACACTACCAGTGCTGCATGCACCTTCATCGTTAAGTACCTCGCTGAGCTTCCTCAAATCTACGATAGCGTCTACAGAGAGCAAATGGAAATAGCAAAAGCAAAAGGCGCAGGGGAGTTATTGAAGTGGGAAGACATTCAGAAGATGAAGTATTCGTGGAACGTCGCCTGTGAGGTTCTAAGACTTGCTTCCCCACTTCAAGGTGCCTTTAGGGAACCCATTAATGACTTCGTTTTCAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATATTGGAGTTCAAACTCAACACACAAAAACCATGCGTACTTCCCAGAGCCCTACAAATTTGATCCATCGAGATTTGAGGGCAATGGCCCTGCGCCCTACACCTTTGTGCCCTTCGGCGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTACGCCAAGCTCGAGATTCTCGTCTTCATGCACAATTTGGTGAAGAGATTCAAATGGACAAAGCTCATGGACAAGGAGAAGATCATTGTTGACCCATTGCCAATCCCTGAGAAAGGTCTGCCCGTTCGCCTTTTTCCTCATAAATATCTCTCTCTTTAG 1452 48.97 MADFLISLLILFLSFISLTLFVLFYKHKSLFSYPNTPPGAIGLPIIGESLEFLSTGWKGEPEKFIFDRLNKYKSDIFKTSIVGVPAAIFCGPACNKFLFSNENKLVTSWWPDSVNKIFPASTEINSKESAIRLKKLLPRFLKPEALQRYIGVMDELAQRHFASSWENREQVLVFPLAKSFTFSLACRLFVSLEDRIHVERLSEPFQNIAAGIISMPIDLPGTPFNRAIKASNFVRKELLSIVRQRKSDLAEGKASPTQDILSHMLLTCDEIGQYMNESAIADNILGLLIGGHDTTSAACTFIVKYLAELPQIYDSVYREQMEIAKAKGAGELLKWEDIQKMKYSWNVACEVLRLASPLQGAFREPINDFVFNGFYIPKGWKLYWSSNSTHKNHAYFPEPYKFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWTKLMDKEKIIVDPLPIPEKGLPVRLFPHKYLSL 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3922862 3926937 + Cp4.1LG18g02200.1 Cpe18g00228 484689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00228 483 Pfam Cytochrome P450 37 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PANTHER CYTOCHROME P450 26 8 476 - -
Cpe18g00228 483 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 8 476 - -
Cpe18g00228 483 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Cpe18g00228 483 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00228 483 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00761 Cpe-Chr6:4810835 Cpe18g00228 Cpe-Chr18:3922862 1.72E-91 dispersed
Cpe15g00868 Cpe-Chr15:8444664 Cpe18g00228 Cpe-Chr18:3922862 4.03E-92 dispersed
Cpe18g00228 Cpe-Chr18:3922862 Cpe14g00428 Cpe-Chr14:2689691 2.84E-74 dispersed
Cpe18g00228 Cpe-Chr18:3922862 Cpe02g00180 Cpe-Chr2:920166 7.63E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00228 K20667 - csv:101206033 830.091