Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00256 | ATGAGGCTTCAAGTGAACGACGGCGATGTCGACGACGATCTTGTTCCTCCCCCCAACTTCTCCAGTGTTGAGGATGGCATTTTCCGATCCGGCTTCCCTCAGCCTTCCAATTTTCCCTTCCTCAAGAATCTAAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAGAGCTAATAACATCAAGCTTTTTCAATTCAAAATTGAAGGGACAAAGGAGCCTTTCGTTTCGATTCCGAAGGATGCTATTCTGGACGCCCTAAAAATCCTAATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTCGTGGGTTGCCTGAGGAAGTTCCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATATGCAGGCGTGAAATCAAGGGCGACGGATCTACAATTCATCGAGGCATTCAACATAGAGCCTTTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGGTATAGCTCAAACAAGAGAAGGCTGTTGTACAGAGAAGAGAAGTTGCAGAAGCCCCAAACAACACCAGTTTAG | 603 | 46.43 | MRLQVNDGDVDDDLVPPPNFSSVEDGIFRSGFPQPSNFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGTKEPFVSIPKDAILDALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRYAGVKSRATDLQFIEAFNIEPLRQCVYSIIYQYQGYSSNKRRLLYREEKLQKPQTTPV | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 4212289 | 4214921 | - | Cp4.1LG18g02560.1 | Cpe18g00256 | 484717 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00256 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 14 | 31 | IPR020428 | GO:0016791 | |
Cpe18g00256 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 51 | 64 | IPR020428 | GO:0016791 | |
Cpe18g00256 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 70 | 84 | IPR020428 | GO:0016791 | |
Cpe18g00256 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 101 | IPR020428 | GO:0016791 | |
Cpe18g00256 | 200 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 162 | IPR029021 | - | |
Cpe18g00256 | 200 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 10 | 183 | - | - | |
Cpe18g00256 | 200 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 109 | 119 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe18g00256 | 200 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE DSP5 | 10 | 183 | - | - | |
Cpe18g00256 | 200 | Pfam | Tyrosine phosphatase family | 14 | 164 | IPR004861 | - | |
Cpe18g00256 | 200 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 19 | 170 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe18g00256 | 200 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 14 | 157 | IPR029021 | - | |
Cpe18g00256 | 200 | CDD | PFA-DSP_Siw14 | 14 | 160 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00827 | Cpe-Chr4:7718030 | Cpe18g00256 | Cpe-Chr18:4212289 | 6.58E-74 | dispersed | |
Cpe15g00854 | Cpe-Chr15:8351458 | Cpe18g00256 | Cpe-Chr18:4212289 | 1.48E-29 | dispersed | |
Cpe16g00749 | Cpe-Chr16:7535164 | Cpe18g00256 | Cpe-Chr18:4212289 | 7.92E-70 | dispersed | |
Cpe18g00256 | Cpe-Chr18:4212289 | Cpe05g01529 | Cpe-Chr5:10530069 | 2.67E-76 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00256 | K18045 | - | csv:101211082 | 346.665 |