Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00316 ATGGGGTCCATGGCTAGTTTACTCGTTGCTTACTTTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTTGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTGCCATCTGATTATCTCACCCACCATGACTGGTACTCTGCCCATCTCCAATCTCTGTCCTCCTCTGCTACCTCCGATTCCCTTCTCTACACCTACACCTCCGCCTACCATGGCTTCGCTGCTTCTCTTGACCCAGATGAAGCCGAATTGCTCCGCCAATCCGATTCAGTTCTGGGTGTCTATGAAGACACTGTTTACAATCTTCACACAACTCGCACTCCGGGTTTCCTCGGCCTCGACTCCGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCATGATGTCATCATTGGGGTTCTCGATACCGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCGGGATGCCGGAGATCCCATCACGGTGGCGTGGAGAATGTGAATCGGGACCCGATTTCAGCCCTTCTCTCTGTAACAAGAAACTAATCGGAGCACGCAGCTTCTCGAAGGGTTATCAAATGGCTTCCGGTGGTGGGTACTTCAGAAAATCCAGAGAGAATGAGTCGCCTCGTGACCAGGATGGGCACGGCACGCACACTGCGAGCACGGCTGCTGGGTCGCATGTGGCTAACGCGAGCTTACTTGGGTATGCTAGAGGCATAGCTAGGGGAATGGCTCCTCAAGCAAGAGTTGCCGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCTGACGGCGTCGATGTGCTATCACTCTCTTTGGGTGGTGGCTCTGCACCGTATTACAGGGATACAATAGCAATCGGAGCATTTGCGGCCATGGAGAAGGGGGTTTTCGTTTCGTGCTCAGCTGGAAACAGTGGGCCCAACAAGGCGTCTCTGGCTAATGTGGCCCCCTGGATCATGACAGTCGGAGCCGGAACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGCAAGCGGTTCACTGGAGTGTCACTCTACAGTGGCCAAGGAATGGGAAATAAACCGGTGGCTTTGGTGTACAACAAAGGAAGCAACAGCTCCAGCAACATGTGCTTACCCGGATCTCTTGAGCCGGCGTTTGTTCGGGGGAAGGTGGTAATCTGCGACAGGGGAATCAACGCCAGAGTAGAGAAGGGAGGGGTGGTGCGAGATGCAGGTGGTATTGGGATGATTCTGGCAAACACGGCAGCCAGTGGGGAAGAACTGGTGGCTGACAGTCACTTACTGCCGGCCGTGGCGGTTGGGGCGAAAACCGGCGACTTGATCCGGCAGTATGTACGGTCAGTAGCGAAGCCGACGGCCGTGCTGAGCTTTGGTGGGACAGTTCTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTTAGTTCCAGAGGACCCAACTTGGTAACGCCACAAATCCTTAAGCCGGACGTTATAGGGCCTGGCGTTAACATCCTGGCCGCCTGGTCCGAGTCCATCGGGCCTACTGGATTGGACAACGATAAGAGGAAAACACAGTTCAATATCATGTCAGGAACATCCATGTCTTGCCCGCACATAAGTGGGCTGGCGGCGTTGCTGAAGGCAGCTCATCCATCATGGAGTCCAAGCGCAATCAAATCTGCATTAATGACCACTGCCTACACGCAGGACAACACCAACTCATCTCTCCGGGATGCCGCCGGAGGCATGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTCGATCCTCACAAAGCCCTCTCCCCCGGTCTTGTATACGACATCTCGACCAATGATTATATTACTTTTTTGTGCTCCTTGGACTATGGTATCGATCATGTTCAGGCAATTGCGAAGCGATCGAACATAACCTGCTCGAAAAAGTTTGCTGACCCAGGGCAACTAAACTACCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATAGTTACCAATGTTGGGGCTGCAGGGTCAGTTTATGAAGTGGCTACTACTGCACCGTCGGTTGTGAAGGTGACGGTGAAACCTTCAAAGCTTGTGTTCTCTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTCGTGGCGAGCAGGGACGCTGCTCGAACCACGAGATATGGGTTTGGATCGATTGCTTGGAGCAATGACCAACACCAAGTTAGAAGCCCGGTGGCATTCGCCTGGACCAAGTTGTGA 2298 52.83 MGSMASLLVAYFLLLLLLPCVFVNAKRTYIVRMKHHALPSDYLTHHDWYSAHLQSLSSSATSDSLLYTYTSAYHGFAASLDPDEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKSRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNSSSNMCLPGSLEPAFVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGAKTGDLIRQYVRSVAKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPSWSPSAIKSALMTTAYTQDNTNSSLRDAAGGMFSNPWAHGAGHVDPHKALSPGLVYDISTNDYITFLCSLDYGIDHVQAIAKRSNITCSKKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFSKVGERKRYTVTFVASRDAARTTRYGFGSIAWSNDQHQVRSPVAFAWTKL 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4681499 4685228 - Cp4.1LG18g03160.1 Cpe18g00316 484777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00316 765 Pfam PA domain 378 461 IPR003137 -
Cpe18g00316 765 MobiDBLite consensus disorder prediction 202 226 - -
Cpe18g00316 765 SUPERFAMILY Protease propeptides/inhibitors 28 104 - -
Cpe18g00316 765 CDD Peptidases_S8_3 103 581 IPR034197 -
Cpe18g00316 765 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252|GO:0006508
Cpe18g00316 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cpe18g00316 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cpe18g00316 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Cpe18g00316 765 Pfam Peptidase inhibitor I9 28 106 IPR010259 -
Cpe18g00316 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Cpe18g00316 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 106 IPR037045 -
Cpe18g00316 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 762 IPR045051 -
Cpe18g00316 765 Pfam Fibronectin type-III domain 662 759 IPR041469 -
Cpe18g00316 765 CDD PA_subtilisin_like 351 474 - -
Cpe18g00316 765 PANTHER CUCUMISIN-RELATED 18 762 - -
Cpe18g00316 765 SUPERFAMILY Subtilisin-like 105 619 IPR036852 GO:0004252|GO:0006508
Cpe18g00316 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Cpe18g00316 765 Gene3D - 345 483 - -
Cpe18g00316 765 Gene3D - 632 762 - -
Cpe18g00316 765 Pfam Subtilase family 136 586 IPR000209 GO:0006508|GO:0008236
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01018 Cpe18g00316 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00510 Cpe-Chr7:3344112 Cpe18g00316 Cpe-Chr18:4681499 0 dispersed
Cpe10g00465 Cpe-Chr10:2723972 Cpe18g00316 Cpe-Chr18:4681499 0 dispersed
Cpe14g00140 Cpe-Chr14:760659 Cpe18g00316 Cpe-Chr18:4681499 0 dispersed
Cpe17g00429 Cpe-Chr17:3208267 Cpe18g00316 Cpe-Chr18:4681499 0 dispersed
Cpe05g00291 Cpe-Chr5:1636417 Cpe18g00316 Cpe-Chr18:4681499 0 transposed
Cpe12g00580 Cpe-Chr12:5872029 Cpe18g00316 Cpe-Chr18:4681499 0 wgd
Cpe17g00453 Cpe-Chr17:3377017 Cpe18g00316 Cpe-Chr18:4681499 0 wgd
Cpe18g00316 Cpe-Chr18:4681499 Cpe04g01018 Cpe-Chr4:9065992 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00316 - - csv:101209781 1391.71