Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00326 | ATGAGTGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACAGGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAATCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCGGCTCCTCAAATGTCTTCAAATCCTAATGGAAATGGCATATCAACCAAAGACACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAAGCCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCAGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCCGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCATCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAA | 993 | 43.91 | MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQQVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSNQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDRSPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYPLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 4738529 | 4742369 | + | Cp4.1LG18g03200.1 | Cpe18g00326 | 484787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00326 | 330 | MobiDBLite | consensus disorder prediction | 148 | 181 | - | - | |
Cpe18g00326 | 330 | Pfam | WRC | 77 | 118 | IPR014977 | - | |
Cpe18g00326 | 330 | Pfam | QLQ | 8 | 41 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe18g00326 | 330 | MobiDBLite | consensus disorder prediction | 148 | 179 | - | - | |
Cpe18g00326 | 330 | ProSiteProfiles | QLQ domain profile. | 8 | 43 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe18g00326 | 330 | PANTHER | GROWTH-REGULATING FACTOR 6 | 5 | 318 | - | - | |
Cpe18g00326 | 330 | SMART | QLQ_2 | 7 | 43 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe18g00326 | 330 | PANTHER | - | 5 | 318 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Cpe18g00326 | 330 | ProSiteProfiles | WRC domain profile. | 76 | 120 | IPR014977 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g01028 | Cpe18g00326 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g01193 | Cpe-Chr5:8256902 | Cpe18g00326 | Cpe-Chr18:4738529 | 3.41E-69 | dispersed | |
Cpe16g00168 | Cpe-Chr16:3771041 | Cpe18g00326 | Cpe-Chr18:4738529 | 9.60E-63 | dispersed | |
Cpe18g00326 | Cpe-Chr18:4738529 | Cpe19g00691 | Cpe-Chr19:5432617 | 3.30E-34 | dispersed | |
Cpe11g01195 | Cpe-Chr11:9762295 | Cpe18g00326 | Cpe-Chr18:4738529 | 4.46E-95 | wgd | |
Cpe18g00326 | Cpe-Chr18:4738529 | Cpe02g01745 | Cpe-Chr2:14257197 | 1.25E-68 | wgd | |
Cpe18g00326 | Cpe-Chr18:4738529 | Cpe04g01028 | Cpe-Chr4:9123274 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50873 | PF08879 | WRC | 1.10E-20 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00326 | - | - | cpep:111780092 | 667.537 |