Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00326 ATGAGTGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACAGGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAATCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCGGCTCCTCAAATGTCTTCAAATCCTAATGGAAATGGCATATCAACCAAAGACACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAAGCCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCAGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCCGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCATCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAA 993 43.91 MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQQVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSNQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDRSPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYPLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4738529 4742369 + Cp4.1LG18g03200.1 Cpe18g00326 484787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00326 330 MobiDBLite consensus disorder prediction 148 181 - -
Cpe18g00326 330 Pfam WRC 77 118 IPR014977 -
Cpe18g00326 330 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe18g00326 330 MobiDBLite consensus disorder prediction 148 179 - -
Cpe18g00326 330 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe18g00326 330 PANTHER GROWTH-REGULATING FACTOR 6 5 318 - -
Cpe18g00326 330 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe18g00326 330 PANTHER - 5 318 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cpe18g00326 330 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01028 Cpe18g00326 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01193 Cpe-Chr5:8256902 Cpe18g00326 Cpe-Chr18:4738529 3.41E-69 dispersed
Cpe16g00168 Cpe-Chr16:3771041 Cpe18g00326 Cpe-Chr18:4738529 9.60E-63 dispersed
Cpe18g00326 Cpe-Chr18:4738529 Cpe19g00691 Cpe-Chr19:5432617 3.30E-34 dispersed
Cpe11g01195 Cpe-Chr11:9762295 Cpe18g00326 Cpe-Chr18:4738529 4.46E-95 wgd
Cpe18g00326 Cpe-Chr18:4738529 Cpe02g01745 Cpe-Chr2:14257197 1.25E-68 wgd
Cpe18g00326 Cpe-Chr18:4738529 Cpe04g01028 Cpe-Chr4:9123274 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50873 PF08879 WRC 1.10E-20 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00326 - - cpep:111780092 667.537