Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00337 ATGTTGCCAGTTCATGTTGGTCTTATTTATACTCCTTCAGATTGTGGATTGCCATCAGGAATAGTTGTAGTTAGTGGACCAGTTAACATCATTGTAGGTTCTCATATCTGGATTGAAGATCCAAAACTAGCTTGGATTGACGGGGAAGTTTTTCGAATCAATGGCGAGGAAGTTCATGTCCGGGCTACCAACGGGAAAACAGTTGTTACGAATATATCGAAGATATACCCCAAGGATACCGAAGCACCTGCTGCAGGTGTAGATGACATGACGAAGCTGTCATACTTGCACGAACCGGGAGTTTTGAGCAACTTGGCGACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGATTACCCCATCTGTATGATATTCACATGATGGAACAATACAAAGGAGCTGGTTTCGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCGGAAGTGGCATACCGGGCTATGATTAATGAAGGAAAAAGCAATTCAATCCTAGTCAGTGGAGAAAGTGGTGCGGGTAAGACCGAGACCACGAAGATGCTCATGCGGTATCTTGCGTACCTTGGAGGTCGATCTGGAGTGGAAGGGCGAACCGTTGAACAACAAGTCCTAGAATCCAATCCTGTTCTTGAAGCGTTCGGAAATGCGAAAACTGTTCGGAACAATAACTCAAGTAGGTTTATTCAAGCCTTGAAACTCGATATATCTTCACGCTTCATTATCACTGCATGTTCTTGTGCAAGGGATGGAACATTCTTAAATGCTAACGACTCGTTTAACTTGCTCGAAAGACGTGATTCTAATCAATGCATTGACAAAAACCAGGAACGAGTGAAGTATAAATTAGAAAACCCGAAATCGTTCCACTACTTAAATCAATCTAGCTGCTTTGAATTGGATGGCGTGAACGACGCTCATGAGTATCTCGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGTGAGGAGGAGCAGGACGCGATTTTTAGGGTCGTGGCTGCAATTTTGCATCTTGGAAATATTGAATTCTCAAAGGGAGAGGAGATTGATTCTTCAGTCATTAAGGATGAAAAATCAAGATTTCATCTTAATACGACTGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAAGTTGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACGCTTGATCCTGTGGCTGCTTTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGACTCTTTGACTGGCTCGTGGAGAAGATTAACAATTCGATTGGGCAAGACCCGAACTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTCGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTCACAAATGAAAAACTTCAGCAACATTTTAATCAGAAACCGGGGGGAATTATCGCACTTCTGGACGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTCGCTCAAAAGTTATACCAAACGTTCAAGAACAACAAGCGCTTCATCAAGCCGAAGCTATCTCGTACGAGTTTTACAATATCTCATTATGCGGGCGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTACGTGGTAGCCGAACATCAGGCGCTATTGACATCCTCGAAATGCTCCTTTGCAAGAGCTTTATTTCCACCTCAACCCGAGGAAACATCAAAATCCTCAAAATTTTCTTCCATTGGTTCGCGTTTTAAATTACAACTTCAATCGTTAATGGAGACGTTAAATTCGACCGAACCTCACTACATCAGATGTGTAAAGCCAAATAATACGCTCAAGCCTGCCATTTTCGAGAATTCGAATGTTATCCAACAATTACGTTGTGGTGGTGTCCTTGAAGCGATTAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACGTTTTACGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTTTGGACCATGATGACAAGGTAGCATGCCAGATGATCCTGGATCAAATGGGTTTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTAGAACGTTTATTGCACGCAAGGAGTTCGTTGCGTTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAATCTATTTGAGCAGCTACAACGGGAAGCGGCAGCTTTAAAGATCCAGAAGTGTTTCAAGCGATATACTGCTCGAAAGTCATACTTAGATTTGCTTTCATCAGCAATCACATTGCAAACAGGGTTACGGGCAATGAAGGCTCGTGACGAATTCAGATTTAGAAGGCGTACTAAGGCAGCAATTATCGTTCAGGCACGTTTGCGGTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTAACCACACAGTGTAGTTGGAGGCGACGAGTAGCCCGAAAGGAGCTAAGAAAACTGAAAATGACTGATCTGGAAGAGGAGAAAGCTCAAGAAATTGCTAAATTACAAGATGCTTTACACAATATGCAATTACAAGTTGAAGAAGCAAATGCTCGAGTTATCAAAGAACGAGAGGCGATTCAGAAAGCTATTGAAGAAGCACCTCCAGTCGTCAAGGAAACTCCCGTTTTCGTCGAGGATACCGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTGAAGGCTTCATTGCTGTCGGAGAAAACGACAGCTGAAGAAGCAAGAAAAGCTTGTACCGAAGCCGAAGTTAAAAGTATGGAGCTGACCAAAAGACTTCAAGATTCAGACAAGAAAGCGGATCAGCTTCAGGAGTCGTTGCAGCGGCTTGAAGAGAAGCTTTCGAATTCGGAATCAGAGAACCAGGTACTTCGTCAACAAGCCTTGACTATGTCGCCGACGGGAAAAGCTTTATCTGCAAGACCGAAGTCGATGATTATTCAGAGGACACTAGAGAACGGAAATATTTCGCACGGAGAGGTCAAAGTATCGTCGGAGAACCAGGACCTTCTAGTAAAGTGCATATCAAAAGACTTGGGCTTTTCTGGAGGCAAACCAGTAGCTGCTTGTGTCATATACAAATGTCTTCTTCACTGGAGGTCGTTCGAAGTCGAAAGAACGAGCATATTCGATCGACTCATTCAAACAATAGCTTCGTCGATAGAGGTCCAGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACATTACTGTTGCTCCTTCAACACACTCTGAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTTCTACAGCTTCTCTTTTCGGAAGGATGTCTCAAGGATTAAGGGGATCTCCGCAAAGTGGTGGACTATCGTTTCTTAACGGTCGGGGGCTGGGTCGAGTGGACGATTTTCGACAGGCTCCAAGGACATCAAGGGCAAGCTTAGTGAAAGGACGTTCCCAAGCTAACGCTATGGCTCAACAGGCCTTAATTGCACATTGGCAAAGCATTGTGAAAAGTTTAAACAATTACTTGAAGATCATGAAAGCAAACTACGTACCTCCGTTCCTCGTCCGCAAAGTTTTCACTCAGATATTTGCGTTCATTAACGTTCAACTATTTAACAGCCTTCTTTTGCGGCGTGAGTGTTGTTCGTTCAGCAACGGAGAGTATGTGAAAGCTGGGTTGTCTGAATTAGAACAGTGGTGCTCGGAAGCAACCGAGGAATATGCTGGGTCTGCCTGGGATGAACTAAAGCATATTAGGCAGGCTGTTGGATTCCTTGTTATTCATCAAAAACCCAAAAAGACCTTGAATGAGATAACAAAAGATCTCTGTCCTGTGCTTAGCATACAACAGTTATATAGGATTAGTACAATGTACTGGGATGACAAATATGGCACACATAGTGTATCTTCGGAAGTTATTTTGAGTATGCGAATTTTGATGACTGAAAACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGATTCTAGTATCCCATTTTCTGTGGATGATATTTCCAAATCAATGAACCAAGTAGACGTAACAGACATTGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTGA 4236 42.63 MLPVHVGLIYTPSDCGLPSGIVVVSGPVNIIVGSHIWIEDPKLAWIDGEVFRINGEEVHVRATNGKTVVTNISKIYPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDIHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFIQALKLDISSRFIITACSCARDGTFLNANDSFNLLERRDSNQCIDKNQERVKYKLENPKSFHYLNQSSCFELDGVNDAHEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEVALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTSSKCSFARALFPPQPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNTLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDHDDKVACQMILDQMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARNLFEQLQREAAALKIQKCFKRYTARKSYLDLLSSAITLQTGLRAMKARDEFRFRRRTKAAIIVQARLRCHMAYSYYTRLQKAALTTQCSWRRRVARKELRKLKMTDLEEEKAQEIAKLQDALHNMQLQVEEANARVIKEREAIQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLSEKTTAEEARKACTEAEVKSMELTKRLQDSDKKADQLQESLQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTLENGNISHGEVKVSSENQDLLVKCISKDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRLIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTSTASLFGRMSQGLRGSPQSGGLSFLNGRGLGRVDDFRQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKVFTQIFAFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVILSMRILMTENSNNAISSFLLDDDSSIPFSVDDISKSMNQVDVTDIDPPPLIRENSGFGFLLQRAE 1411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4819598 4836064 - Cp4.1LG18g03460.1 Cpe18g00337 484798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00337 1411 PANTHER MYOSIN-5 925 1176 - -
Cpe18g00337 1411 Coils Coil 947 1002 - -
Cpe18g00337 1411 PANTHER MYOSIN 29 484 - -
Cpe18g00337 1411 Gene3D Kinesin motor domain 610 648 IPR036961 -
Cpe18g00337 1411 ProSiteProfiles Myosin motor domain profile. 85 716 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 Pfam DIL domain 1231 1334 IPR002710 -
Cpe18g00337 1411 Pfam Myosin head (motor domain) 87 484 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 SMART MYSc_2a 79 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 790 819 IPR000048 GO:0005515
Cpe18g00337 1411 Gene3D - 465 484 - -
Cpe18g00337 1411 Gene3D Myosin VI head, motor domain, U50 subdomain 332 464 - -
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 719 748 IPR000048 GO:0005515
Cpe18g00337 1411 CDD MYSc_Myo11 99 704 IPR036018 -
Cpe18g00337 1411 Gene3D - 818 866 - -
Cpe18g00337 1411 Gene3D - 769 817 - -
Cpe18g00337 1411 Gene3D - 717 768 - -
Cpe18g00337 1411 PRINTS Myosin heavy chain signature 172 197 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 PRINTS Myosin heavy chain signature 219 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 PRINTS Myosin heavy chain signature 449 477 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 PRINTS Myosin heavy chain signature 115 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 CDD MyosinXI_CBD 1041 1377 IPR037975 GO:0007015
Cpe18g00337 1411 PANTHER MYOSIN 925 1176 - -
Cpe18g00337 1411 PANTHER MYOSIN 484 900 - -
Cpe18g00337 1411 Gene3D - 485 609 - -
Cpe18g00337 1411 Pfam Myosin N-terminal SH3-like domain 33 73 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 767 796 IPR000048 GO:0005515
Cpe18g00337 1411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 769 863 IPR027417 -
Cpe18g00337 1411 Coils Coil 863 908 - -
Cpe18g00337 1411 SMART iq_5 718 740 IPR000048 GO:0005515
Cpe18g00337 1411 SMART iq_5 741 763 IPR000048 GO:0005515
Cpe18g00337 1411 SMART iq_5 814 836 IPR000048 GO:0005515
Cpe18g00337 1411 SMART iq_5 789 811 IPR000048 GO:0005515
Cpe18g00337 1411 SMART iq_5 766 788 IPR000048 GO:0005515
Cpe18g00337 1411 SMART iq_5 837 859 IPR000048 GO:0005515
Cpe18g00337 1411 PANTHER MYOSIN 1178 1407 - -
Cpe18g00337 1411 PANTHER MYOSIN-5 484 900 - -
Cpe18g00337 1411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 769 IPR027417 -
Cpe18g00337 1411 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 31 80 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe18g00337 1411 ProSiteProfiles Dilute domain profile. 1086 1355 IPR002710 -
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 742 771 IPR000048 GO:0005515
Cpe18g00337 1411 Gene3D - 653 714 - -
Cpe18g00337 1411 Gene3D Kinesin motor domain 35 314 IPR036961 -
Cpe18g00337 1411 SMART DIL_2 1230 1337 IPR002710 -
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 815 844 IPR000048 GO:0005515
Cpe18g00337 1411 Gene3D Myosin VI head, motor domain, U50 subdomain 554 587 - -
Cpe18g00337 1411 ProSiteProfiles IQ motif profile. 838 867 IPR000048 GO:0005515
Cpe18g00337 1411 PANTHER MYOSIN-5 1178 1407 - -
Cpe18g00337 1411 PANTHER MYOSIN-5 29 484 - -
Cpe18g00337 1411 Pfam IQ calmodulin-binding motif 840 859 IPR000048 GO:0005515
Cpe18g00337 1411 Pfam IQ calmodulin-binding motif 769 787 IPR000048 GO:0005515
Cpe18g00337 1411 Pfam IQ calmodulin-binding motif 743 762 IPR000048 GO:0005515
Cpe18g00337 1411 Pfam IQ calmodulin-binding motif 721 739 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01037 Cpe18g00337 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g01007 Cpe-Chr11:8497930 Cpe18g00337 Cpe-Chr18:4819598 0 dispersed
Cpe12g01135 Cpe-Chr12:9324251 Cpe18g00337 Cpe-Chr18:4819598 0 dispersed
Cpe13g01088 Cpe-Chr13:8773062 Cpe18g00337 Cpe-Chr18:4819598 1.22E-43 dispersed
Cpe17g00969 Cpe-Chr17:7393051 Cpe18g00337 Cpe-Chr18:4819598 0 dispersed
Cpe18g00337 Cpe-Chr18:4819598 Cpe04g01037 Cpe-Chr4:9169006 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00337 K10357 - csv:101204300 2391.3