Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00342 | ATGGATTCCAACAGACAAAGAAATGTCGTCCGCTTTGTTAATTTTTTGAGGCGCCATTCTCCGACAATCAACACGAAACAGAGGAATGTTCTGGATCATCGGAAGGTTGAAGCCGAGGAAGAAGACGAAGTGGGAACCGCCGCCGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAATCGGAGTTGTGGGTTCGAGCTTGACTCTGGAGAAGGTCGCTGCAGCCAAACAGTTCATTGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGTTCCGTGCTCGAAAAGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAAGATTTGGAGCTCAAGGAGACTCAATACATGAGGCTGAAAAGGCATAAAATTTGTGTCGAGGATTTCGACCTTTTGACGATTATTGGTCGAGGTGCTTTCGGGGAGGTCAGGCTTTGTCGGGAGAAGAAAACAGGCAACATCTATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCAAGTCACTGCATTGTGAAACTCTATTATTCTTTCCAAGATGCTGAATACTTGTATCTTATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACAGAAACCGTGGCTAGATTTTACGTCGCCCAAACTGTTTTGGCTATAGAGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTTCTATAAATGAAAATGAAGTCCTTGACGACGAAAACTTGCCTGACACGGTGGACGTGGACGAGAGCTTTCCAGATAAGAAAAGCGGGAGGCGTTGGAAGAGCCCCCTCGAACAACTTCAGCACTGGCAGATTAACAGAAGGAAACTGGCGTTTTCCACGGTTGGCACTCCAGATTACATAGCTCCGGAAGTGTGGTCTCTTGGTGCAATAACGTACGAAATGCTTGTCGGTTATCCGCCATTTTATTCTGATGATCCAATAACAACATGCCGAAAGGCTCATCCTTGGTTTAAACATACCGAGTGGGACAAACTCTATGACATCGATGCAGCGTTTAAGCCCGAGGTCAACGACGAACTCGATACGCAGAATTTTATGCAGTTTGATGAGGTCGATCCACCGCCAACGAGAACCGGATCTGGACCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGATTTGAAATCGAGCATCACCCCGACTCGGACTTCGTCAGTTGACTCGACTAAAAGTGACTCGGCATTGATCAACTACTCAACAGAGGACAGGGAAGCCATGTTGGCACCATCAGGGGATGCTTTGTCACAGTAA | 1425 | 45.47 | MDSNRQRNVVRFVNFLRRHSPTINTKQRNVLDHRKVEAEEEDEVGTAAVEEEEEEEEEEEIGVVGSSLTLEKVAAAKQFIENHYKAQKKHIQERKERRSVLEKKLASSDVSEEEQINLLKDLELKETQYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQTVLAIEGHMKLSDFGLCKPLDCTNLSSINENEVLDDENLPDTVDVDESFPDKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVWSLGAITYEMLVGYPPFYSDDPITTCRKAHPWFKHTEWDKLYDIDAAFKPEVNDELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVDLKSSITPTRTSSVDSTKSDSALINYSTEDREAMLAPSGDALSQ | 474 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 4868147 | 4877502 | - | Cp4.1LG18g03470.1 | Cpe18g00342 | 484803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00342 | 474 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 417 | IPR011009 | - | |
Cpe18g00342 | 474 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 251 | 366 | - | - | |
Cpe18g00342 | 474 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 43 | 254 | - | - | |
Cpe18g00342 | 474 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 366 | 431 | - | - | |
Cpe18g00342 | 474 | SMART | pkinase_C_6 | 372 | 431 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe18g00342 | 474 | ProSiteProfiles | Protein kinase domain profile. | 142 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00342 | 474 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 251 | 366 | - | - | |
Cpe18g00342 | 474 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 43 | 254 | - | - | |
Cpe18g00342 | 474 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 366 | 431 | - | - | |
Cpe18g00342 | 474 | ProSitePatterns | Protein kinases ATP-binding region signature. | 148 | 171 | IPR017441 | GO:0005524 | |
Cpe18g00342 | 474 | Pfam | Protein kinase domain | 144 | 254 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00342 | 474 | Gene3D | Phosphorylase Kinase; domain 1 | 76 | 262 | - | - | |
Cpe18g00342 | 474 | Gene3D | Transferase(Phosphotransferase) domain 1 | 313 | 405 | - | - | |
Cpe18g00342 | 474 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Cpe18g00342 | 474 | MobiDBLite | consensus disorder prediction | 37 | 58 | - | - | |
Cpe18g00342 | 474 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 372 | 468 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g01042 | Cpe18g00342 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe17g00907 | Cpe-Chr17:7020142 | Cpe18g00342 | Cpe-Chr18:4868147 | 2.33E-159 | dispersed | |
Cpe18g00342 | Cpe-Chr18:4868147 | Cpe02g00275 | Cpe-Chr2:1427219 | 0 | wgd | |
Cpe18g00342 | Cpe-Chr18:4868147 | Cpe04g01042 | Cpe-Chr4:9213627 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62979 | PF00069 | Pkinase | 2.80E-24 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00342 | K08790 | - | csv:101208238 | 699.893 |