Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe18g00396 | ATGGGGAGGGCGACAAGATGGTTCAAGAACTTCTTTGGGATTAAGAGAGACAAAGAAAATTCCAACCAAACAAAACCCACTTCCAATTCCGCCGCCGACAACGATCTCTGCAATAATCCCGCCACAACACCGCCAGGGTATCTGGCGAGGAAAGCACTGAGAGCACTGAAAGGACTGGTGAAATTACAGGCGGTTGTTAGGGGATATTTTGTTCGTAAACAAGCGACAGCTACTCTTCTCAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCGTTCGGTCTCAGAGAACTCGCAGACTTGAAATCCGAGCCCGCAAGAACACGGAGAGATTTGACGATACGAAGAGCGAACACACAGCTTCAGTTCATAGCAGACGGCTCTCTGCTTCATTAGACAACATGATATTTACAACGCTGGAAGAAAGCCCCAAAATCGTGGAAATGGATACCAGCCGACCCAAATCCATGTCTCGTCGAACGAACACGTCGTTGTCGGAATTGGGTGACGACCCATTTAACCAACCATTGTCGTCTCCACTCCCTTGTCGGACTCCATCGCGTTTGCAGATCCCAGATGGTCGGAATTTCCACGATTCCGATTGGGGTTTTGTGGCTGAGGAATGCCGTTTAATCTCGACGGCGCAGAGTACTCCACGATTTGTCAGCTGTGGTGGTTCCAATGGTGGTCCTCCGACGCCGGCGAAGAGTATGTGCGGCGATAATTTCTTCAGAGGGTACTTGAATTTCCCAAATTACATGGCGAACACTCAATCGTTTAAAGCGAAATTAAGGTCTCAGAGTGCTCCAAAACAGAGGCCAGAGCCGGGAACGAAGAAAAGAGTTTCATTGAACGAATTAATGGAATCAAGAAGCAGCCTTAGTGGGGTTCGAATGCAGAGATCATGCTCCCAAGTTCAAGACGCCATTAATTTCAAGAACGCAGTGATGAGCAAACTCGACCGGCCATCGGAATTCAACAACTTGCAGAGAAAAACATGA | 999 | 48.15 | MGRATRWFKNFFGIKRDKENSNQTKPTSNSAADNDLCNNPATTPPGYLARKALRALKGLVKLQAVVRGYFVRKQATATLLSMQALIRAQATVRSQRTRRLEIRARKNTERFDDTKSEHTASVHSRRLSASLDNMIFTTLEESPKIVEMDTSRPKSMSRRTNTSLSELGDDPFNQPLSSPLPCRTPSRLQIPDGRNFHDSDWGFVAEECRLISTAQSTPRFVSCGGSNGGPPTPAKSMCGDNFFRGYLNFPNYMANTQSFKAKLRSQSAPKQRPEPGTKKRVSLNELMESRSSLSGVRMQRSCSQVQDAINFKNAVMSKLDRPSEFNNLQRKT | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 5187816 | 5189453 | - | Cp4.1LG18g03960.1 | Cpe18g00396 | 484857 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe18g00396 | 332 | PANTHER | IQ-DOMAIN 5-RELATED | 46 | 323 | - | - | |
| Cpe18g00396 | 332 | ProSiteProfiles | IQ motif profile. | 57 | 84 | IPR000048 | GO:0005515 | |
| Cpe18g00396 | 332 | PANTHER | - | 46 | 323 | - | - | |
| Cpe18g00396 | 332 | Pfam | Protein of unknown function (DUF4005) | 217 | 296 | IPR025064 | - | |
| Cpe18g00396 | 332 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
| Cpe18g00396 | 332 | MobiDBLite | consensus disorder prediction | 147 | 181 | - | - | |
| Cpe18g00396 | 332 | MobiDBLite | consensus disorder prediction | 23 | 40 | - | - | |
| Cpe18g00396 | 332 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g01092 | Cpe18g00396 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe12g00183 | Cpe-Chr12:1177128 | Cpe18g00396 | Cpe-Chr18:5187816 | 6.39E-26 | dispersed | |
| Cpe17g00159 | Cpe-Chr17:1009066 | Cpe18g00396 | Cpe-Chr18:5187816 | 6.78E-29 | dispersed | |
| Cpe12g00644 | Cpe-Chr12:6309281 | Cpe18g00396 | Cpe-Chr18:5187816 | 4.78E-90 | wgd | |
| Cpe17g00525 | Cpe-Chr17:4376627 | Cpe18g00396 | Cpe-Chr18:5187816 | 1.64E-07 | wgd | |
| Cpe18g00396 | Cpe-Chr18:5187816 | Cpe02g01697 | Cpe-Chr2:13961624 | 2.31E-63 | wgd | |
| Cpe18g00396 | Cpe-Chr18:5187816 | Cpe03g01092 | Cpe-Chr3:9011328 | 7.06E-68 | wgd | |
| Cpe18g00396 | Cpe-Chr18:5187816 | Cpe04g01092 | Cpe-Chr4:9504874 | 2.02E-10 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe18g00396 | - | - | mcha:111014524 | 459.914 |