Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00410 ATGGGTTGCGTTTTTTCGAGGGTTTGTATTGGCGAGGAAACTACTTCAAGATCTTCGAGAATCGCTGAAGCCCAAATTGCCAAAACCGCCGCTGAAATCGACACGATCTCTTCTTCGTCTTCTAATAGCCGAGAAGGCGAAATCGGCGACCAACTAAATCGATTGAATTCAAACAACAGAGATTCAGAAGTGGGAATCACGAGGCTGTCGAGAGTTTCTTCCCAGTTCTTGCCCGCCGAGGGGTCTCGAACCGTCAAAGTTCCTTCTGGGAACTTCAAATTACAATATTCGTTCCTTTCGCAAAGAGGGTATTATCCCGATGCCCTTGATAAGGCAAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGACCATTTCTTTGGGGTTTTCGACGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGTTAAACGGAAGCTCTGTGAAAATTTACTTAGGAATAGTAGGTTCCACACTGACGCTGTTGAAGCTTGTCATGCGGCTTATCTAACCACTAATTCACAGTTGCACGCAGATATCTTGGATGATAGCATGAGTGGTACTACGGCTATTACTGTTTTAGTTAGAGGTAGGACTATATATGTTGCTAATTCAGGTGATTCGAGAGCGGTTATAGCAGAGCGGAGAGGAAAGGAAGTCGTGGCTGTCGACCTCTCAATCGATCAAACTCCGTTCCGAGCCGATGAAGTTGAACGTGTTAAGCTTTGTGGTGCTAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAACCCTGAGATTCAGTTCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTTTGGGTACCTAATGGGATGTACCCTGGCACTGCTTTCACAAGAAGTATAGGCGACTCGATTGCCGAGACAATTGGCGTTGTTGCTACGCCTGAAATTGTTGTTCTGGAGCTGACACCAGATCATCCTTTCTTTGTTGTTGCTAGTGATGGGGTATTTGAGTTTCTTTCGAGCCAAACCGTGGTCGACATGGTTTCTAAATATAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCTGAGTCCTATAAACTTTGGCTTCAATTTGAGACGCGAACAGACGATATCACGGTTATCGTGGTGCATATCAATGGACTAACCAATACTGTTACTAGTGAATCGACAAGATCCGTTGGAGGTGGTATCGTTCCATCTGCTCTTCCTCAAGTCGTGGAGGTGACAGGATCAGAGTCTCCTTCTACCTTTGGCTGGAATAGAAACAACCGTGCAAGGCAAGATTTGTCAAGGGCACGTCTCCGGGCTATCGAGAGTTCCCTAGAGAACGGGCAAGTCTGGGTGCCTCCATCACCAGCTCACAGGAAGTCATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGACCATTTCCTCTTCAGAAAACTAACTGATTCTCAGTGCCAAGTCTTACTAGATTGTATGCAAAGAGTTGAGGTCATACCCGGGCAAATCGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTATGTGGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGACGTTCCTCGAATTCTGCAACACTACACAGCTGAGAAGCTATCTTCCTTTGGGGAACTGGCTTTGATGTATAACAAACCACTTCAAGCCTCGGTACGCGCTGTTACAAGTGGGACGCTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGCATTCTTATATCAGAATTTTCGAACTTGTCATCTTTGAAATCTCTTCGATCTGTCGACCTTTTGTCGAACTTCAATTATGCCAGTCAAGAGGAGGACGATGCCACACAGTGTGGTAACGAGATCGTAGCTATTAAGAAAGAGGGAAGTTATTTTGGTGAATGGGGACTTCTTGGTGAGCGTGTGGGCTTCTTACAAGCAGTTGCTGTGGGAGATGTTATTTGTTCTATTTTAACAAAGGAAAAGTTTGAATCAGTTGTTGGCCCTTTACCAAAGCTCTCCCAAGATGATCAAAAGTATATTGCATTTGCTTTTGAGTTGGCGAAGGAACATTCTTCAGACACTCTCCATCACTCAGACAAAATTCTCGACATTTCAGCTATTCCGAAAGTCGAGCTCGCTGATCTGGAGTGGAAAACGTGTTTATATTCCACAGAATACAGTGAAATCGGTCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGATTTGCAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGCACAAGTTTCAAAGGAGAAAGATCTTATGAAGAGCATCAGTTCTTCAGCTTGTGTGCCGCAAATTCTCTGCACTTGTTTAGACCAATCACATGCTGCCATATTGCTAAAAACTCGCCTTGCTTGTCCTTTGTCTTCGATACTTCAAGTCCCGCTCGATGAATCTTCTGCACGTTTCTTCGCAGCCTCTCTTGTTATGGCACTGGAAGATCTGCACAAGCTTGGTGTTCTCCACAGAGGAATCTCCCCTGATGTTCTAATGTTGAATCAAACCGGACACTTACAGTTAGTAGACTTTAGATATGGGAAACGAACATCGGGCGAGAGAACGTATACTATTTGCGGGGCGGCCGACTTCTTAGCTCCCGAGATAGTTCAGGGCAATGGCCATGGTTTCGCTGCTGACTGGTGGGCACTGGGAGTCTTAATCTATTTCATGCTGAAAGGTAAAATGCCATTCGGATCATGGCGACAAGGCGAGCTCGACACGTTTTCGAAGATCGCAAGAGGACAATTAAGTCTTCCCCAGATTTTCAGTCATGAAGCAATTGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAAAGACTTGGAAACGAGAATCAAAACTCTGTTAGAACTCATCCCTGGTTCGATGGCGTTGATTGGAAGGGAATCCACGACGGTACCTTTCCCGTTCCCGAGTCGATTACTTCTCGTGTCGCTCGATATTTGGAGAGCTACCCTGAAGATTACAGTGTTTCTTTAGTCTCTTTAGTCAAACCAACTCAAGATCGCGATGAACAGGATGTCGTCCCTGAGTGGATCAACGACTGGTAG 3111 45.48 MGCVFSRVCIGEETTSRSSRIAEAQIAKTAAEIDTISSSSSNSREGEIGDQLNRLNSNNRDSEVGITRLSRVSSQFLPAEGSRTVKVPSGNFKLQYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSRFHTDAVEACHAAYLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQTPFRADEVERVKLCGARVLTLDQIEGLKNPEIQFWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTPDHPFFVVASDGVFEFLSSQTVVDMVSKYKDPRDACAAIVAESYKLWLQFETRTDDITVIVVHINGLTNTVTSESTRSVGGGIVPSALPQVVEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKSWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGDVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKSLRSVDLLSNFNYASQEEDDATQCGNEIVAIKKEGSYFGEWGLLGERVGFLQAVAVGDVICSILTKEKFESVVGPLPKLSQDDQKYIAFAFELAKEHSSDTLHHSDKILDISAIPKVELADLEWKTCLYSTEYSEIGLVRLRNTETMLSLKRFARQKVKRLGLEAQVSKEKDLMKSISSSACVPQILCTCLDQSHAAILLKTRLACPLSSILQVPLDESSARFFAASLVMALEDLHKLGVLHRGISPDVLMLNQTGHLQLVDFRYGKRTSGERTYTICGAADFLAPEIVQGNGHGFAADWWALGVLIYFMLKGKMPFGSWRQGELDTFSKIARGQLSLPQIFSHEAIDLIVKLLEVDEKKRLGNENQNSVRTHPWFDGVDWKGIHDGTFPVPESITSRVARYLESYPEDYSVSLVSLVKPTQDRDEQDVVPEWINDW 1036
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5284713 5290608 - Cp4.1LG18g04090.1 Cpe18g00410 484871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00410 1036 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Cpe18g00410 1036 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 28 611 - -
Cpe18g00410 1036 Gene3D Jelly Rolls 449 588 IPR014710 -
Cpe18g00410 1036 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Cpe18g00410 1036 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 640 1023 - -
Cpe18g00410 1036 SUPERFAMILY PP2C-like 82 387 IPR036457 -
Cpe18g00410 1036 Gene3D - 88 386 IPR036457 -
Cpe18g00410 1036 SUPERFAMILY cAMP-binding domain-like 625 680 IPR018490 -
Cpe18g00410 1036 MobiDBLite consensus disorder prediction 34 59 - -
Cpe18g00410 1036 SUPERFAMILY Protein kinase-like (PK-like) 712 1009 IPR011009 -
Cpe18g00410 1036 CDD CAP_ED 480 588 IPR000595 -
Cpe18g00410 1036 Gene3D Jelly Rolls 603 687 IPR014710 -
Cpe18g00410 1036 Pfam Protein phosphatase 2C 122 363 IPR001932 -
Cpe18g00410 1036 ProSiteProfiles Protein kinase domain profile. 721 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00410 1036 SMART cnmp_10 480 603 IPR000595 -
Cpe18g00410 1036 CDD PP2Cc 111 385 IPR001932 -
Cpe18g00410 1036 Pfam Protein kinase domain 732 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00410 1036 ProSiteProfiles cAMP/cGMP binding motif profile. 633 674 IPR000595 -
Cpe18g00410 1036 PRINTS cAMP-dependent protein kinase signature 668 680 - -
Cpe18g00410 1036 PRINTS cAMP-dependent protein kinase signature 516 530 - -
Cpe18g00410 1036 PRINTS cAMP-dependent protein kinase signature 501 515 - -
Cpe18g00410 1036 PRINTS cAMP-dependent protein kinase signature 551 560 - -
Cpe18g00410 1036 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 28 611 - -
Cpe18g00410 1036 ProSiteProfiles cAMP/cGMP binding motif profile. 480 588 IPR000595 -
Cpe18g00410 1036 SMART PP2C_4 91 383 IPR001932 -
Cpe18g00410 1036 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
Cpe18g00410 1036 SUPERFAMILY cAMP-binding domain-like 461 589 IPR018490 -
Cpe18g00410 1036 Gene3D Transferase(Phosphotransferase) domain 1 806 988 - -
Cpe18g00410 1036 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 640 1023 - -
Cpe18g00410 1036 SMART serkin_6 728 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00410 1036 Gene3D Phosphorylase Kinase; domain 1 720 805 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01110 Cpe18g00410 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01405 Cpe-Chr3:11329796 Cpe18g00410 Cpe-Chr18:5284713 4.17E-139 dispersed
Cpe12g00239 Cpe-Chr12:1606039 Cpe18g00410 Cpe-Chr18:5284713 1.22E-141 dispersed
Cpe17g00110 Cpe-Chr17:676117 Cpe18g00410 Cpe-Chr18:5284713 1.15E-142 dispersed
Cpe18g00410 Cpe-Chr18:5284713 Cpe12g00136 Cpe-Chr12:864627 4.46E-34 dispersed
Cpe18g00410 Cpe-Chr18:5284713 Cpe04g01110 Cpe-Chr4:9625043 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62983 PF00069 Pkinase 6.50E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00410 - - vvi:100266345 1516.9