Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00430 ATGATCGGAGTTTCGATTTCTTCTTCGTCTATCTCCTTCTTCGTCATCTTCGTCCCCATCTTTATCTCCATTTCTATTTTCCAATTCAACCCCTCATCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCAACGATCCATTTCCGTCCAAGAACGTCACTGATGGGAACCGAGTCTCGCAGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGATTTTATCTGGAGTCACGTATTAGATCGGGCGGCTGGAAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCAACCGATTTCGGCTTGGTATCAATTGAGGACTCGGTGGTAAGGGAGCTGGTTGAGGAGATTGAGGAATTGGAGCTTGTCAAGGATGTGAATGTCGATGCAAGCCACGTCAGGGGTTTGCTAGAGGAGGGTGGGGGTAGAATTGGGGCTTTTGTCGATGGGAAGAAGCGTCCGGGGAAGATTTTCACCTCCATGTCTTTTAACGAAGAAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTTGATGCAGAGATCTCAAGTCACCTCATTATTTGGAGCAGACTCTCTTTGGGCAAAGGGGTATACTGGTTCCAAAGTCAAGATGGCTATATTTGATACTGGTATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCTGGTGGGGATGAAGAATGTCTAGGGTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTCGATGCATTCAACTATGCAATTGCTACCAATATGGATGTATTAAATTTGAGCATTGGTGGACCAGATTACTTAGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACGGCAAATAATATCATCATGGTTTCTGCAATTGGGAATGATGGACCACTTTACGGGACCTTAAACAATCCTGCAGATCAGAGTGATGTCATTGGTGTTGGTGGTATTGACTACAATGATCACATTGCTTCGTTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTAATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCAAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCAAGTCCTGTGGTTGCTGGTGTGGTATGTCTGCTTGTTAGTGTCATCCCTGAAAGCCAGCGGAAGACTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGTTGGTCCTAATATGTACGAGCAAGGTGCTGGCAGAGTTGATCTGTTAGAATCATATGAAATACTTAAGAGCTACCAACCTCGGGCAAGCATCTTCCCTGGTGTTCTTGACTATACAGATTGCCCTTATACATGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTATTATTTTCAATGCTACCATTTTGAATGGAATGGGTGTAATTGGCTATGTTGAAGGTCAACCAACTTGGAATCCTTCGGATGAAGAAGGAAATCTCTTAAGTATTCACTTCACTTATTCTAAGGTTATCTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAGGAAGGTGCACAGTTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCTAGAGGAGAGAAGAACCGCCGGATAAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTAGTTCCAACACCTCCAAGATCAAAACGAATTTTATGGGATCAATTTCATAACATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACGCTTGGTTCTCCTCTAACATGCTTTGATGCTCGCCAATATGGGACACTTTTACTAGTGGATCTTGAAGATGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGGTTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTCGATGATAACACAAGAAGCTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCATCAGGAACAGATATTGTGAGGTTTCCACGAGGTGGTTATGTGCATAGTTTCCCTTTCATTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCCTGAGTAAGGCAGACTTTCCAATTCTTGGCCTATTAGAGGCAGGAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTAGATAGCAGCCATATGGTTACAAATTGCTATTGGCTCCTGAGAAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCGGTGCTATTCACCAAGTTTTCCAAACAAAATTCACCTCTATATCTTGAAGATAACAAACTTCCATCTCGAAGAAGCGATGTAAATTTCTCTTTGTATTCTGCTGTTTCTGGAAAGGAATTGATATGCATGAGTGATTCTAGGTTTGAAGTATGGGGTACCAAGGGATACAGTGTACAGGGCAGGGGAAGGAATAGAAGGCTGCCTGGATTTCCCTTAATTGACTTGGGAAGAGACTCGAATTCTACTCCAGAAAGTTCTTTGATGGGACCTCCCAAGTTGACTTTAAAGGACCGAAGTGATAAATATGGAAACCGATACTTAAGCTTGTTCTACCGGGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCTGTCGCAGGGCTTTTGCTTCTTTTGAGTTTTTGGCGAATTAGACAGAAGCGACGACGCCGAAGAAGAGGCTCGGGATCTGCTGCACGTTTTTCCAATCTCTAG 3162 42.98 MIGVSISSSSISFFVIFVPIFISISIFQFNPSSDHTVFQTLTRNYSPNDPFPSKNVTDGNRVSQKNYIVRFVQYREAKEHRFYLESRIRSGGWKWIERRNPASKYPTDFGLVSIEDSVVRELVEEIEELELVKDVNVDASHVRGLLEEGGGRIGAFVDGKKRPGKIFTSMSFNEEGGERYTAISNASNRWGRHLLMQRSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGNGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKTILNPASMKQALVEGAAKLVGPNMYEQGAGRVDLLESYEILKSYQPRASIFPGVLDYTDCPYTWPFCRQPLYAGAMPIIFNATILNGMGVIGYVEGQPTWNPSDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPRGGYVHSFPFIDSSESGAAQSILTSSLSKADFPILGLLEAGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDVNFSLYSAVSGKELICMSDSRFEVWGTKGYSVQGRGRNRRLPGFPLIDLGRDSNSTPESSLMGPPKLTLKDRSDKYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVAVAGLLLLLSFWRIRQKRRRRRRGSGSAARFSNL 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5393937 5400710 + Cp4.1LG18g04140.1 Cpe18g00430 484891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00430 1053 PRINTS Subtilisin serine protease family (S8) signature 217 236 IPR015500 -
Cpe18g00430 1053 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Cpe18g00430 1053 PRINTS Subtilisin serine protease family (S8) signature 420 436 IPR015500 -
Cpe18g00430 1053 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 61 878 - -
Cpe18g00430 1053 Pfam Subtilase family 217 467 IPR000209 GO:0006508|GO:0008236
Cpe18g00430 1053 SUPERFAMILY Subtilisin-like 203 482 IPR036852 GO:0004252|GO:0006508
Cpe18g00430 1053 CDD Peptidases_S8_SKI-1_like 211 467 IPR034185 -
Cpe18g00430 1053 ProSitePatterns Serine proteases, subtilase family, histidine active site. 257 267 IPR022398 -
Cpe18g00430 1053 ProSiteProfiles Serine proteases, subtilase domain profile. 189 487 - -
Cpe18g00430 1053 ProSitePatterns Serine proteases, subtilase family, serine active site. 421 431 IPR023828 -
Cpe18g00430 1053 Gene3D Peptidase S8/S53 domain 192 483 IPR036852 GO:0004252|GO:0006508
Cpe18g00430 1053 PANTHER PEPTIDASE S8 61 878 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00430 Cpe-Chr18:5393937 Cpe05g01379 Cpe-Chr5:9709271 5.81E-07 dispersed
Cpe18g00430 Cpe-Chr18:5393937 Cpe08g00816 Cpe-Chr8:6490241 2.00E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00430 K08653 - csv:101222509 1904.03