Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00431 ATGTCGTCTCCGTCTCCGAGCTCTCCGCCGGCGCCTAGTACGACCTCACCCCTACCTCCGACCACCGACGCACCACCCCCGGCGGCGCCGTCTCTCTCACCGCCGTCTCCTGACGCTGCCTCTCAGCCTCCACCTGCTACATCCCTACCGCCTTCTACCACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTTCATCCCCGCCACCTCCGGACAGTGCTACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCACCGCCTCCTGACAGTGCTACTCCATCCCCGCCTACTACTTCTCCTTTACCACCTACAGCTCCTAAGAGCTCTTCGCCGCCGCCGCCGGACAGTGCCACTCCATCTCCGCCTACTTCTTTACCGCCTACATCGCCTTCGGGCTCTTCGCCGCCGCCGCCGTCGAATTCTAGTACACCTACGAGTCCAGGAGGACACGTCGCCCCGCCGTCGAATTCTAGTACACCTACGAGTCCAGGAGGACATGACGCCCCGCCGTCGCATTCTGGTACACCAACGAATCCGGGAGGAAATGAGGCTCCGCCGTCTTTCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGACTGGAGTTGTCATTGCTGGAGTGGTGGTGGTGGTTGCTGCGTTCATTCTTTTGGTTTTGTGTTTAAGAAAGAAGAGAAGACGTGACGAGGAGTCGTACTACCGGCCGCCGCCACCGGGGGCGTTTAAAGATGGCCCATATGATCCCCAACAGCACCACTGGCAATCACATCTGCCGCCGTTGCCGCCGACTAATCATGTCGTCGGGACAGTACCGAAGCCGTCTCCTCCGCCAGCATCACGACCACCGCCGTCTCCTTCGCCAGCATCACGACCACAGCCGTCACCTCCTATTATAAACAGCAGCGGAGGCTCTGGATCTTATTATTCAGGGTCTGAATATTCGCATGCTCCTGTTCCTGCTCCTTCTCCTGCTCCATCTTCTATTCCCTTGGGCTACTCGCAAAGCAGCTTCACTTATGAAGAGTTAGCAATGGCGACAGACAGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTCCTTCCAAACGGAAAGGAAGTGGCAGTGAAGCAACTCAAGGCTGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCAGAAGTAGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTGGTGGGGTATTGCATCACCGGCTCCCAAAGATTGCTGGTTTATGAATTTGTTCCAAACAACACATTGGAGTTCCACTTGCACGGTAATCCTAAGATCATTCATCGTGACATCAAAGCTGCAAATATACTTCTGGATCTCAAATTCGAAGCAATGGTTGCAGATTTTGGGCTTGCCAAATTGTCTTCTGATGTTAATACTCACGTTTCAACTCGAGTTATGGGAACTTTCGGCTACCTTGCTCCTGAATACGCTTCAAGTGGGAAACTCACTGATAAATCAGATGTCTTCTCCTTCGGAGTGATGCTTTTGGAGATGATTACTGGACGCAGACCTGTGGACACAACTCAATCATACATGGACGATGGACTGCTCGATTGGGCAAGGCCATTACTACTTAGGGCCGCAGAAGATGGGAACTACGATGGTCTAGTAGATCCAAAGCTGCGAGATAACTACGATCATAATGAGATGGGTCGGATGATTGCTTGTGCAGCTGCCTGTGTGCGCCATTCGGCGAGGCGCCGGCCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGTGAAGCCTCGCTTTCTGATCTTAACAAAGGGGTTCAGCCTGGACATAGCAGCGTCTACAGTTCTCATGGAAGCTCCGACTACGACACATCTCAGTACAATGAGGACATGAAGAAGTTCAGGAAGATGGCATTGGCAAGCCAGGAGTACGGCAGCGAGTACAGCGAGCCGACGAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCCAACAACAAGGGAAATGGAAATGAGAACAATGAAGACAGAAAGTGGAGGTTCTTGA 2061 53.47 MSSPSPSSPPAPSTTSPLPPTTDAPPPAAPSLSPPSPDAASQPPPATSLPPSTTPSPPPPDSATSSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPTTSPLPPTAPKSSSPPPPDSATPSPPTSLPPTSPSGSSPPPPSNSSTPTSPGGHVAPPSNSSTPTSPGGHDAPPSHSGTPTNPGGNEAPPSFSPSSGVSAGLVTGVVIAGVVVVVAAFILLVLCLRKKRRRDEESYYRPPPPGAFKDGPYDPQQHHWQSHLPPLPPTNHVVGTVPKPSPPPASRPPPSPSPASRPQPSPPIINSSGGSGSYYSGSEYSHAPVPAPSPAPSSIPLGYSQSSFTYEELAMATDRFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGNPKIIHRDIKAANILLDLKFEAMVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLEMITGRRPVDTTQSYMDDGLLDWARPLLLRAAEDGNYDGLVDPKLRDNYDHNEMGRMIACAAACVRHSARRRPRMSQVVHALEGEASLSDLNKGVQPGHSSVYSSHGSSDYDTSQYNEDMKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGPTTREMEMRTMKTESGGS 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5399968 5403197 - Cp4.1LG18g04470.1 Cpe18g00431 484892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00431 686 Pfam Protein kinase domain 435 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00431 686 SUPERFAMILY Protein kinase-like (PK-like) 336 595 IPR011009 -
Cpe18g00431 686 Gene3D Transferase(Phosphotransferase) domain 1 433 608 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 646 686 - -
Cpe18g00431 686 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 96 438 - -
Cpe18g00431 686 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 439 675 - -
Cpe18g00431 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 96 438 - -
Cpe18g00431 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 439 675 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 146 194 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 603 627 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 1 145 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 606 627 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 647 671 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 297 313 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 266 296 - -
Cpe18g00431 686 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
Cpe18g00431 686 MobiDBLite consensus disorder prediction 1 194 - -
Cpe18g00431 686 SMART serkin_6 351 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00431 686 ProSiteProfiles Protein kinase domain profile. 351 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00431 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Cpe18g00431 686 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Cpe18g00431 686 MobiDBLite consensus disorder prediction 228 326 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01010 Cpe18g00431 CCT
Cpe04g01128 Cpe18g00431 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01252 Cpe-Chr5:8763463 Cpe18g00431 Cpe-Chr18:5399968 2.14E-162 dispersed
Cpe13g01009 Cpe-Chr13:8308041 Cpe18g00431 Cpe-Chr18:5399968 3.25E-106 dispersed
Cpe18g00431 Cpe-Chr18:5399968 Cpe01g00667 Cpe-Chr1:3898590 2.20E-158 dispersed
Cpe18g00431 Cpe-Chr18:5399968 Cpe04g01128 Cpe-Chr4:9750604 0 wgd
Cpe18g00431 Cpe-Chr18:5399968 Cpe07g01010 Cpe-Chr7:9183558 6.60E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62984 PF00069 Pkinase 3.60E-22 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00431 - - cpep:111779918 957.592