Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00444 | ATGGAGGAGAATCACTGCAATGGAAATTCTCAATCCCAGCTCAATTTACCCAAAATCAAGTTCACAAAGCTTTTCATCAATGGACAATTCCTTGACTCTGTTTCAGGAAAAACTTTGGAGACCATAGATCCAAGAACAGGGGAGGTTATCGCGTCGGTGGCCGCCGGGGACAAAGAAGACGTGGATTTGGCCGTGAAAGCCGCCCGTGAGGCTTTCGATCATGGCCCTTGGCCACGCATGTCCGGCGCCGAGAGGGGGAGGATAATGACAAAACTAGCGGAATTGATAGATGCACACGTGGAGGAACTGGCAACGTTGGATACCATCGACGGTGGAAAATCGTTTCATCTGGGGAAGATAGTGGATATACCCGGGGCTGCAAATACGCTGCGGTACTACGCAGGTGCAGCGGATAAAATTCACGGCAAGATATTGAAAATGTCAAGGCCGCTTCATGGCTACACGTTACTGGAGCCGATTGGAGTGGTGGGTCATATCATACCGTGGAACTTTCCGACGACCATGTTCTGGTTGAAAGTTAGCCCGGCGTTGGCTGCCGGATGTACCATGATCGTCAAGCCCGCCGAACAGACGCCCCTCTCCGCCCTGTTCTACGCTCATCTCGCCAAACTGGTGAGCTTCACAGGATCAACCAAGGTGGGGAGGTTGATAATGCAGGCCGCAAGTGCCAGTAACCTGAAGCAAGTGTCATTGGAATTAGGAGGCAAATCCCCTCTTCTAATCTTCGATGATGCTGATATCAACAAAGCCGTCGATCTTGCTCTCCTCGCCATTTTTTACAACAAGGGAGAAATCTGCGTGGCCGGCTCCCGGGTTCTGGTTCAAGAAGGAATTTATGATGAATTCGTCAAAAAGATTAGCGAAAAGGCCAAATCCTGGGTGGTGGGAGACCCTTTTGATCCCAAAGTTAATTATGGACCCCAGGTGGACAAAAAGCAACTGGATAAGATTCTGATGTACATAGAACACGGTAAAAGAGAAGGAGCAACGCTGGTTACAGGCGGCAAGCGTATAGGCGAAGTGGGGTATTACGTAGAGCCCACAATCTTCACAGACGTCAAGGAAGACTCACTGATTGCGCAGGATGAAATATTCGGGCCTGTTCTCTCCGTCATAAAATTCAAGACGATTGAAGAGGGAATAAGGAGCGCAAACAACACCAAGTACGGGCTGGCAGCTGGGATAGTGACGAACAACATAGACATAGCCAACACGGTGTCCAGGTCCATCCGAGCGGGTACCATTTGGCTAAATTGTTACTTTGCTTTCGACTCGAGCTGCCCGTTCGGAGGGTATAAGGCGAGTGGGTTCGGGAGAGACTCTGGAATGCAGGCTATCCATAAGTATCTTCAAACCAAAGCCGTCGTCACTCCTTTGGTTAATTCTCCTTGGCTTTGA | 1419 | 49.75 | MEENHCNGNSQSQLNLPKIKFTKLFINGQFLDSVSGKTLETIDPRTGEVIASVAAGDKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMTKLAELIDAHVEELATLDTIDGGKSFHLGKIVDIPGAANTLRYYAGAADKIHGKILKMSRPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLVSFTGSTKVGRLIMQAASASNLKQVSLELGGKSPLLIFDDADINKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKISEKAKSWVVGDPFDPKVNYGPQVDKKQLDKILMYIEHGKREGATLVTGGKRIGEVGYYVEPTIFTDVKEDSLIAQDEIFGPVLSVIKFKTIEEGIRSANNTKYGLAAGIVTNNIDIANTVSRSIRAGTIWLNCYFAFDSSCPFGGYKASGFGRDSGMQAIHKYLQTKAVVTPLVNSPWL | 472 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5463577 | 5467249 | + | Cp4.1LG18g04360.1 | Cpe18g00444 | 484905 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00444 | 472 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 11 | 210 | IPR016162 | GO:0016491 | |
Cpe18g00444 | 472 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 211 | 462 | IPR016162 | GO:0016491 | |
Cpe18g00444 | 472 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 5 | 211 | - | - | |
Cpe18g00444 | 472 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 244 | 433 | IPR016163 | GO:0016620 | |
Cpe18g00444 | 472 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 238 | 245 | IPR029510 | GO:0016491 | |
Cpe18g00444 | 472 | PANTHER | DEHYDROGENASE, PUTATIVE-RELATED | 212 | 472 | - | - | |
Cpe18g00444 | 472 | PANTHER | DEHYDROGENASE, PUTATIVE-RELATED | 5 | 211 | - | - | |
Cpe18g00444 | 472 | SUPERFAMILY | ALDH-like | 16 | 467 | IPR016161 | GO:0016491 | |
Cpe18g00444 | 472 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 266 | 277 | IPR016160 | GO:0016491 | |
Cpe18g00444 | 472 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 212 | 472 | - | - | |
Cpe18g00444 | 472 | Pfam | Aldehyde dehydrogenase family | 210 | 462 | IPR015590 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00001 | Cpe-Chr7:393 | Cpe18g00444 | Cpe-Chr18:5463577 | 0 | dispersed | |
Cpe11g00003 | Cpe-Chr11:14515 | Cpe18g00444 | Cpe-Chr18:5463577 | 0 | dispersed | |
Cpe18g00444 | Cpe-Chr18:5463577 | Cpe18g00825 | Cpe-Chr18:7639618 | 1.36E-94 | dispersed | |
Cpe12g00579 | Cpe-Chr12:5865017 | Cpe18g00444 | Cpe-Chr18:5463577 | 2.58E-34 | transposed | |
Cpe18g00444 | Cpe-Chr18:5463577 | Cpe04g01139 | Cpe-Chr4:9800137 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00444 | K12355 | - | csv:101219029 | 826.239 |