Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00444 ATGGAGGAGAATCACTGCAATGGAAATTCTCAATCCCAGCTCAATTTACCCAAAATCAAGTTCACAAAGCTTTTCATCAATGGACAATTCCTTGACTCTGTTTCAGGAAAAACTTTGGAGACCATAGATCCAAGAACAGGGGAGGTTATCGCGTCGGTGGCCGCCGGGGACAAAGAAGACGTGGATTTGGCCGTGAAAGCCGCCCGTGAGGCTTTCGATCATGGCCCTTGGCCACGCATGTCCGGCGCCGAGAGGGGGAGGATAATGACAAAACTAGCGGAATTGATAGATGCACACGTGGAGGAACTGGCAACGTTGGATACCATCGACGGTGGAAAATCGTTTCATCTGGGGAAGATAGTGGATATACCCGGGGCTGCAAATACGCTGCGGTACTACGCAGGTGCAGCGGATAAAATTCACGGCAAGATATTGAAAATGTCAAGGCCGCTTCATGGCTACACGTTACTGGAGCCGATTGGAGTGGTGGGTCATATCATACCGTGGAACTTTCCGACGACCATGTTCTGGTTGAAAGTTAGCCCGGCGTTGGCTGCCGGATGTACCATGATCGTCAAGCCCGCCGAACAGACGCCCCTCTCCGCCCTGTTCTACGCTCATCTCGCCAAACTGGTGAGCTTCACAGGATCAACCAAGGTGGGGAGGTTGATAATGCAGGCCGCAAGTGCCAGTAACCTGAAGCAAGTGTCATTGGAATTAGGAGGCAAATCCCCTCTTCTAATCTTCGATGATGCTGATATCAACAAAGCCGTCGATCTTGCTCTCCTCGCCATTTTTTACAACAAGGGAGAAATCTGCGTGGCCGGCTCCCGGGTTCTGGTTCAAGAAGGAATTTATGATGAATTCGTCAAAAAGATTAGCGAAAAGGCCAAATCCTGGGTGGTGGGAGACCCTTTTGATCCCAAAGTTAATTATGGACCCCAGGTGGACAAAAAGCAACTGGATAAGATTCTGATGTACATAGAACACGGTAAAAGAGAAGGAGCAACGCTGGTTACAGGCGGCAAGCGTATAGGCGAAGTGGGGTATTACGTAGAGCCCACAATCTTCACAGACGTCAAGGAAGACTCACTGATTGCGCAGGATGAAATATTCGGGCCTGTTCTCTCCGTCATAAAATTCAAGACGATTGAAGAGGGAATAAGGAGCGCAAACAACACCAAGTACGGGCTGGCAGCTGGGATAGTGACGAACAACATAGACATAGCCAACACGGTGTCCAGGTCCATCCGAGCGGGTACCATTTGGCTAAATTGTTACTTTGCTTTCGACTCGAGCTGCCCGTTCGGAGGGTATAAGGCGAGTGGGTTCGGGAGAGACTCTGGAATGCAGGCTATCCATAAGTATCTTCAAACCAAAGCCGTCGTCACTCCTTTGGTTAATTCTCCTTGGCTTTGA 1419 49.75 MEENHCNGNSQSQLNLPKIKFTKLFINGQFLDSVSGKTLETIDPRTGEVIASVAAGDKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMTKLAELIDAHVEELATLDTIDGGKSFHLGKIVDIPGAANTLRYYAGAADKIHGKILKMSRPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLVSFTGSTKVGRLIMQAASASNLKQVSLELGGKSPLLIFDDADINKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKISEKAKSWVVGDPFDPKVNYGPQVDKKQLDKILMYIEHGKREGATLVTGGKRIGEVGYYVEPTIFTDVKEDSLIAQDEIFGPVLSVIKFKTIEEGIRSANNTKYGLAAGIVTNNIDIANTVSRSIRAGTIWLNCYFAFDSSCPFGGYKASGFGRDSGMQAIHKYLQTKAVVTPLVNSPWL 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5463577 5467249 + Cp4.1LG18g04360.1 Cpe18g00444 484905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00444 472 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 210 IPR016162 GO:0016491
Cpe18g00444 472 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 211 462 IPR016162 GO:0016491
Cpe18g00444 472 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 211 - -
Cpe18g00444 472 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 244 433 IPR016163 GO:0016620
Cpe18g00444 472 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 238 245 IPR029510 GO:0016491
Cpe18g00444 472 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 212 472 - -
Cpe18g00444 472 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 5 211 - -
Cpe18g00444 472 SUPERFAMILY ALDH-like 16 467 IPR016161 GO:0016491
Cpe18g00444 472 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 266 277 IPR016160 GO:0016491
Cpe18g00444 472 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 212 472 - -
Cpe18g00444 472 Pfam Aldehyde dehydrogenase family 210 462 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00001 Cpe-Chr7:393 Cpe18g00444 Cpe-Chr18:5463577 0 dispersed
Cpe11g00003 Cpe-Chr11:14515 Cpe18g00444 Cpe-Chr18:5463577 0 dispersed
Cpe18g00444 Cpe-Chr18:5463577 Cpe18g00825 Cpe-Chr18:7639618 1.36E-94 dispersed
Cpe12g00579 Cpe-Chr12:5865017 Cpe18g00444 Cpe-Chr18:5463577 2.58E-34 transposed
Cpe18g00444 Cpe-Chr18:5463577 Cpe04g01139 Cpe-Chr4:9800137 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00444 K12355 - csv:101219029 826.239