Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00445 ATGGGTTCCTTCAAATGTGATCAAAATGTGAGCTTTGCTGCTCCTAGGGCGTTTGGGAAGAGGCTGAAATCGGATCTGAAAGAGACGTTTTTCCCTGATGATCCGTTCAGGCAGTTTGGAGATGGCGGAGGGGCTGTGCAGCGAGTGAAAAAGGTCCTCAAATATTTCATCCCCATATTGGAATGGCTTCCTAAATACAACTTGAGTATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACTAGCCTCGCTATTCCCCAAGGCATCAGCTACGCCAAGCTCGCCACCCTCCCTCCCATCATTGGCCTTTATTCTAGCTTCGTTCCTCCGCTTGTATATGCGGTGTTTGGAAGCTCCAAGCATCTGGCGGTAGGGACGGTGGCAGCATGTTCCTTGCTCATATCGCAAATCATCGGACGAGTGGCTTCGCCGGAAGAAGAACCCACATTGTATCTCCACTTGGTTTTCACCGCCACCCTTGTTACCGGTGTCTTTCAGGCCACCTTAGGCTTTCTACGACTGGGAATTTTGGTGGATTTCTTATCGCACTCGACAATTCTTGGGTTTATGGGAGGGACGGCTGTGATCATTTCCCTGCAACAGCTGAAAGGCATGCTTGGACTCACTCATTTCACCTCTAAAACTGACGTTTTTTCGGTACTTCACGCAGTGTTCACCCGTACAAATGAGGTTGTGGAAATGGCAAAGTGCTGTCGTCGGCATCGTCTTCCTTCTATTCCTTCAGTTTACAAGGTTCCTGAGAAACAGAAACCCCAAGCTATTCTGGGTGTCAGCGATGGCTCCCATGGTAACAGTGGTAGTCGGGTGTTTGTTTGCTTATTTCATCAATGGAAGTCAGCATGGAATCTTAACTTTGGTATCACCGAACAGGTGGGTCACTTGAGCAAAGGAATAAACCCTGTTTCCATTCACTTCCTCAACTTCGACTCCAAATATATATCAGTTGTCGTACAAACTGGCTTGATCACTGCCCTTGTGGCTTTGGCTGAAGGAATAGCAATTGGTCGGAGCTTTGCAATCATGAAAAATGAACAAATCGATGGGAACAAGGAGATGGTAGCCTTTGGTTTAATGAACATCCTCGGATCTTTCACTTCCTGCTACCTAACCACTGGGCCTTTCTCAAAGACTGCAGTGAACTTCAATGCTGGGTGTAGGACAGCCATGTCAAACATAGTCATGGCGATCTTCATGGCTCTCACCCTCCTCTTTCTAGCTCCTCTCTTCAGCTACACACCTCTTGTAACCCTCTCCGCCATTATCATGTCCGCCATGTTTGGTCTCATCAAGTATGAAGAAATGTATCATCTTCTCAAGGTCGACAAGTTTGATTTCTGCATATGTATGGCGGCTTTTTTGGGCGTTGCTCTCTTAAGCATGGACGTTGGCATCATGCTTTCGGTGGGACTTGCTTTGCTGAGAGCTCTGCTTTACATGGCTAGACCAGCCACTTGCAAACTCGGGAAAATAACAAACTCCAGTTTGTATAGAGACGTGGAACAGTACCCAAATGCAACAAGAACCCCTGGAATTATTGTTCTTCAACTTGGTTCCCCTGTTTATTACGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGGTTCGTGATGAGCAAACCATATCTGATACCAACGATGGATCCGTCGAACATGTACTGTTGGAGTTGAGCGGAGTTACCTCCATCGACATGACAGGGATCGAAACTCTAGTTGAAATCCACAGATCATTACAAGCAAACGGAATCCAGATGGGAATTATAAACCCAAGAATAGTAGTGATGGAGAAGATGATAGCTTCGGATTTCACAGAAACAATCGGGAAAGAGAACATTTATTTGTCGGTAGACGATGGAGTGGAAAGGTGCAGAGATTTGGTTCCCAAATTAAAGCAAACAGATGGAAGTGGTGAAAGTTCCATTAGTTTTGCAATGGAGCAGCTGCACAGGAATTTAAATCTGTAA 1989 45.7 MGSFKCDQNVSFAAPRAFGKRLKSDLKETFFPDDPFRQFGDGGGAVQRVKKVLKYFIPILEWLPKYNLSMFKYDLLAGITITSLAIPQGISYAKLATLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLISQIIGRVASPEEEPTLYLHLVFTATLVTGVFQATLGFLRLGILVDFLSHSTILGFMGGTAVIISLQQLKGMLGLTHFTSKTDVFSVLHAVFTRTNEVVEMAKCCRRHRLPSIPSVYKVPEKQKPQAILGVSDGSHGNSGSRVFVCLFHQWKSAWNLNFGITEQVGHLSKGINPVSIHFLNFDSKYISVVVQTGLITALVALAEGIAIGRSFAIMKNEQIDGNKEMVAFGLMNILGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMALTLLFLAPLFSYTPLVTLSAIIMSAMFGLIKYEEMYHLLKVDKFDFCICMAAFLGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKITNSSLYRDVEQYPNATRTPGIIVLQLGSPVYYANANYIRERIFRWVRDEQTISDTNDGSVEHVLLELSGVTSIDMTGIETLVEIHRSLQANGIQMGIINPRIVVMEKMIASDFTETIGKENIYLSVDDGVERCRDLVPKLKQTDGSGESSISFAMEQLHRNLNL 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5470892 5474408 + Cp4.1LG18g04400.1 Cpe18g00445 484906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00445 662 PANTHER SULFATE TRANSPORTER 7 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe18g00445 662 PANTHER SULFATE TRANSPORTER 3.5-RELATED 7 639 IPR030316 GO:1902358
Cpe18g00445 662 SUPERFAMILY SpoIIaa-like 511 632 IPR036513 -
Cpe18g00445 662 Pfam Sulfate permease family 71 459 IPR011547 GO:0016021
Cpe18g00445 662 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Cpe18g00445 662 Gene3D STAS domain 489 634 IPR036513 -
Cpe18g00445 662 ProSiteProfiles STAS domain profile. 509 631 IPR002645 -
Cpe18g00445 662 TIGRFAM sulP: sulfate permease 58 626 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe18g00445 662 Pfam STAS domain 510 626 IPR002645 -
Cpe18g00445 662 CDD STAS_SulP_like_sulfate_transporter 510 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01145 Cpe-Chr4:9837186 Cpe18g00445 Cpe-Chr18:5470892 0 dispersed
Cpe17g00870 Cpe-Chr17:6736358 Cpe18g00445 Cpe-Chr18:5470892 0 dispersed
Cpe18g00445 Cpe-Chr18:5470892 Cpe02g00526 Cpe-Chr2:3113853 4.19E-176 dispersed
Cpe12g00701 Cpe-Chr12:6618880 Cpe18g00445 Cpe-Chr18:5470892 0 wgd
Cpe17g00570 Cpe-Chr17:4661197 Cpe18g00445 Cpe-Chr18:5470892 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00445 K17471 - csv:116402148 965.681