Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00446 ATGAATCCCAACTCCCATTTCAACATCTCACCCCTCCTCCTCCTCCTCTTCCTTCCCACATTCCTCCGCCTCGCCGCCGCCCTCCCCGCCGTCAGCCATGGCAGCCTCTCTGACGCTGAAGCTCTCTACATCCGCCGCCGCCAGCTTCTGTACTACAGAGACGAGTTTGGTGACCGTGGCGAAGAAGTCACTGTGGACCCATCTCTGGTTTTCGAAAACGGGAGGATTAGAAATGCTTACATTGCACTTCAGGCTTGGAAACTAGCCATTTTGTCTGACCCTTTCAATCAAACCGCCAATTGGGTCGGATCTGACGTCTGCAGCTACTTCGGCGTTTACTGTGCTCCCGCATTGGACGACCCCAACATCCGCACCGTCGCTGGAATCGATCTCAACCACGGCGACATTGCCGGATACCTCCCTGAAGAGCTCGGTTTGCTTGTGGATCTTGCATTGTTCCATATCAACTCAAACAGATTCTGCGGCACTTTACCTCACAGATTTGATCGTCTCAAGTTGCTACACGAATTGGATCTCAGTAATAACCGGCTCGCTGGGAAGTTCCCCGGCGTGGTTCTCAAGCTTCCGGCGCTCAAGTTTTTGGATCTGAGGTTTAACGAATTCGAAGGAAATGTACCCAGAGAGCTGTTCGATAAGGATTTAGACGCCATTTTTATTAACCACAACAGATTCAGATTCGAACTGCCTGATAATTTTGGAAATTCGCCGGTGTCGGTCATTGTGCTTGGGAACAATAAGTTCCATGGGTGTGTGCCTTCGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGGCTTAATTCTTGCTTGCCGCCCGAAATTGGGGCGTTGAAGAACTTGACGGTGTTCGATGTAAGTTCCAATGAGCTGGTGGGTCCGTTGCCGGAGACATTTGGAGGGCTTGCGAGTTTGGAGCAACTCAATGTGGCTAATAATTTTCTTTCTGGGACGATTCCGGAGAGTATTTGTGATTTGCCTAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTCTCCGGTGAGCCGCAGACGTGTTTGAGGGTTCCGGATTTCAGTGATCGGAGGAATTGCTTGACTGGCCGGCCGGCGCAGCGGCCGAGTGGGCAATGTAAGGCGTTCTTTTCGAGGCGTGTTGATTGTAATGCGTTTAAATGCCGTGCTTCTTCTGTTTCGCCTTCTACTCCATTTACTCCGCCGCCGGCAGGGGAGGTGTCTCCTCCATCGCCGCCGCTCTCGCCCCATTTTCCTCCTCTGTCGCCACATTCGCCACCGTCGGCACCGCCATTGGTTTCTTCTCCGCCGTCACCTTCCTCTCCGTCTACACCTACAACCCCTTCAACGCCACCTCAAGGTCATGCTCCGCCGTCATTACCCTCACCCTTATCGCCCCCTAAAGGTCTTTTTCCGCCGGCATTACCTCCGCCGACTGATCCCTTACCATCCTCACCACCCCACGGCCATACTCCGCCGGGTCCACCTTCGCCTTCCTCTCCATCTACACCGACAACCCCTTCAACGCCGCCTCAAGATCATGCGCCGCCGTCATTACCCTCACCCTTCTCGCCCCCAAAAGGCCATCCACCGCCGGCATTACTTCCGCCGTCTGAACCCTTACCATCTTCACCACCCCACGGCCATACTTCGCCGGGTCCACCTTCGCCTTCCTCTCCGTCTACACCCACAACCCCTTCAACGCCGCCTCAAGATCATGCTCCGCCGTCATTACCCTCACCCTTCTCGCCCCCAAAAGGCCATCCGCCACCGGCATTACCTCCGCCGTCTAATCCCTCACCATCATCACCACCCCACGGCCATACTCCGCCTGGACCACCTTCGCCTTACTCATCGTCTTCACCTACAACCCCTTCAACGCCGCCTCAAGGTCATGCTCCACCGTCATTACCCTCACCCTTATCTCCCCCAAAAGGTCATCCGCCGCCGGCATTACCTCCGCCGTCTGAGCCCTTACCATCCTCACCACCCCACGGCCATACTCCTCCGGGTCCACCTTCTTCATCCGAACCGCCATCATCACCGCCACAAGATCACTCTCCGCCAACTCCCTCGCCGTCCGAACCATCACCTTCAACGCCGCCTACTGGTCAAACTCCAGCCATTCCTCCTTCGCCATCCGTGCCTGCAACTCCATCACCGCCACAAGTCCTCAATCCGCCGGTTGAGCCTTCTCCTCCATTAACATCATCACCACCAGCACCATCATTCCCAGTTCACACTCCGCCTCCACCACATTTCCCTGATTTCCCTTCGCCACCATCCACACAACCTCCTGTCTACTGTCCCCGCTCCCCATATCCACCATCTCCTCCATCCTACTCCCCAAACCCACCTCTCCAACACCCCACCTCCCCTCCGCCGCCATTACCTATTCATTCTCCCCCTCCCCCTGTTTACACATCGCCATCGCCGCTTCCTCTTCCTTGCATACAACCTCCTCCACCTCCCCCACCAGATACTCAATACTCGGAACCACCGCCAACACCATCGTCTCCGATTCCCTACAATTCCCCACCACCGCCATCTCCATCGCCCCCACCGCCTCCAAGCCCTGTATACGGAGGTCCCCTGCCACCAATCTACGGAGTTCCATACGCGTCTCCTCCGCCACCACCCTTGTATTAA 2676 55.53 MNPNSHFNISPLLLLLFLPTFLRLAAALPAVSHGSLSDAEALYIRRRQLLYYRDEFGDRGEEVTVDPSLVFENGRIRNAYIALQAWKLAILSDPFNQTANWVGSDVCSYFGVYCAPALDDPNIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFDRLKLLHELDLSNNRLAGKFPGVVLKLPALKFLDLRFNEFEGNVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVLGNNKFHGCVPSSLGNMTRLNEIIMMNNGLNSCLPPEIGALKNLTVFDVSSNELVGPLPETFGGLASLEQLNVANNFLSGTIPESICDLPKLQNFTFSNNFFSGEPQTCLRVPDFSDRRNCLTGRPAQRPSGQCKAFFSRRVDCNAFKCRASSVSPSTPFTPPPAGEVSPPSPPLSPHFPPLSPHSPPSAPPLVSSPPSPSSPSTPTTPSTPPQGHAPPSLPSPLSPPKGLFPPALPPPTDPLPSSPPHGHTPPGPPSPSSPSTPTTPSTPPQDHAPPSLPSPFSPPKGHPPPALLPPSEPLPSSPPHGHTSPGPPSPSSPSTPTTPSTPPQDHAPPSLPSPFSPPKGHPPPALPPPSNPSPSSPPHGHTPPGPPSPYSSSSPTTPSTPPQGHAPPSLPSPLSPPKGHPPPALPPPSEPLPSSPPHGHTPPGPPSSSEPPSSPPQDHSPPTPSPSEPSPSTPPTGQTPAIPPSPSVPATPSPPQVLNPPVEPSPPLTSSPPAPSFPVHTPPPPHFPDFPSPPSTQPPVYCPRSPYPPSPPSYSPNPPLQHPTSPPPPLPIHSPPPPVYTSPSPLPLPCIQPPPPPPPDTQYSEPPPTPSSPIPYNSPPPPSPSPPPPPSPVYGGPLPPIYGVPYASPPPPPLY 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5474595 5477270 + Cp4.1LG18g04440.1 Cpe18g00446 484907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00446 891 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 474 - -
Cpe18g00446 891 Pfam Leucine rich repeat 291 348 IPR001611 GO:0005515
Cpe18g00446 891 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 474 - -
Cpe18g00446 891 Pfam Leucine rich repeat N-terminal domain 82 114 IPR013210 -
Cpe18g00446 891 Gene3D Ribonuclease Inhibitor 78 241 IPR032675 -
Cpe18g00446 891 SMART LRR_typ_2 171 194 IPR003591 -
Cpe18g00446 891 SMART LRR_typ_2 289 312 IPR003591 -
Cpe18g00446 891 SMART LRR_typ_2 195 219 IPR003591 -
Cpe18g00446 891 SMART LRR_typ_2 313 337 IPR003591 -
Cpe18g00446 891 SUPERFAMILY L domain-like 88 358 - -
Cpe18g00446 891 Gene3D Ribonuclease Inhibitor 242 371 IPR032675 -
Cpe18g00446 891 MobiDBLite consensus disorder prediction 399 891 - -
Cpe18g00446 891 MobiDBLite consensus disorder prediction 405 891 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe11g01106 Cpe18g00446 CCT
Cpe07g00999 Cpe18g00446 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01144 Cpe-Chr4:9833112 Cpe18g00446 Cpe-Chr18:5474595 0 dispersed
Cpe15g00477 Cpe-Chr15:5767108 Cpe18g00446 Cpe-Chr18:5474595 6.12E-71 dispersed
Cpe17g00367 Cpe-Chr17:2640891 Cpe18g00446 Cpe-Chr18:5474595 8.97E-106 dispersed
Cpe18g00446 Cpe-Chr18:5474595 Cpe12g00384 Cpe-Chr12:2744480 1.02E-118 dispersed
Cpe11g01106 Cpe-Chr11:9219685 Cpe18g00446 Cpe-Chr18:5474595 0 wgd
Cpe18g00446 Cpe-Chr18:5474595 Cpe07g00999 Cpe-Chr7:9122216 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00446 - - cpep:111779752 876.315