Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00458 ATGGCTCAAGTTTTTTACTTTCCCCCCTGTCTCCCATGTTTCCTGATTTCCCTTCTTTTTCTTCTTCATTCTGTTCAATCTGAGCCCTCCGCCGACAAGGAAGCTCTTCTTGATTTCTTCAATAAAGTCCCTCATGGCCCTCGTCTTCAATGGAATGCTTCCGCCTCTGCCTGTACTTGGGTTGGAGTTGTCTGTGATGCTACTCAGTCCTTTGTTTTTGCTCTCCGGTTACCTGCTGTTGGGCTTCTTGGTCCGATTCCGGCTGGAACTCTCGGTCGGTTGAATCGTCTTCGAGTTCTTAGTCTCCGGTCGAATGGGATCTCTGGGGGTTTGCCGGCGGATTTTTCTAATTTGACGTTTCTTCGAAGTCTTTTTCTCCAAGACAACGAGCTTTCCGGCGATTTTCCAGTGAGTGTGACTCAGTTGATTCGGTTGACTCGTCTCGACCTCTCGTCGAACAATTTCTCTGGTTCGATTCCGTTTTCGGTGAATAATCTGACCCAGTTGACTGGGCTTTTCTTGGAGAATAATGGGTTTTCGGGTTCTCTGCCGAGTATTCCGGCGATTACTCTAACGCACTTCAATGTATCGAATAATAAGCTCAATGGATCCATTCCCGAAACGCTAGCGAAATTTTCTGCTTCATCTTTTGCTGGGAATTTAGCTCTCTGCGGTGGTCCATTGCCGTCGTGCAACCCGTTTTTTCCATCCCCTGCTCCATCGCCGACGTCCGCCTTGAAACCCCCACAATTTCCCGTCGAGAAGAAATCGAGAAAGCTTTCAATCGCCGCCATTGTCGGAATTGTCGTTGGCGCTGCTTTTGTCGCGTTTCTATTGCTGTTTCTTCTCCTATTTTGCCTTCGAAAGCGCGAGAGGAGGCAACCAGCGAAGCCACCGACTACAGTGGTTGCTGCTCGATCTGTGCCGGCGGAGGCCGGGACATCGTCTTCGAAAGACGACATCACCGGCGGATCAGTGGAGACAGAGAAAAACAAATTAGTGTTCTTCGAGGGTGGGATTTACAGCTTCGACTTGGAGGACTTGTTGAGAGCTTCGGCGGAGGTTTTAGGAAAAGGAAGTGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGGACCACCGTAGTGGTGAAGAGATTGAAAGATGTGGTGGTAACGAAGAAGGAATTCGAGACGCAAATGGAGGCTGTGGGAAACATTAACCATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTCTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCCTCCTCCCTTCACGGAAGCAGAGGATCCGGCCGTACGCCGCTTGACTGGGACAACCGGATGAAAATCGCATTAAGCGCGGCAAGAGGATTGGCTCACCTCCACGTGTCAGGAAAACTCATCCACGGCAACATTAAATCGTCGAACATTCTCCTCCGTCCCAACCACGATGCCGCCGTTTCAGACTTCGGCCTTAACCCTCTCTTTGGCACCTTAACGCCACCCAATCGGATTGCTGGTTACCGCGCGCCGGAGGTTGTCGAAACCCGTAAGGTCACGTTCAAGTCCGACGTGTACAGTTTTGGCGTTTTGCTGTTGGAACTTCTCACCGGGAAATCGCCAAATCAATCGTCGTTGGGCGAAGAAGGGATTGATCTTCCGCGGTGGGTCCAATCGGTGGTTCGAGAGGAATGGACGGCGGAGGTTTTTGATGTGGAATTGATGAGACACCACAATATCGAAGAAGAGATGGTTCAGCTTTTACAAATTGCCATGTCCTGCGTCGCCGCCATGCCGGACCAGCGCCCGTCGATTCAAGAAGTGGTTCGTATGATTGAGGATCTAAACCGCGTTGAGACCGACGATGGCTTACGCCAGTCATCCGATGACCCATCTAAAGGGTCGGAGGGCCACACCCCGCCGTTGGAGTCCAGAACCACCCCTCCCGGAGCCGGTGTACCACCGTAG 1977 51.39 MAQVFYFPPCLPCFLISLLFLLHSVQSEPSADKEALLDFFNKVPHGPRLQWNASASACTWVGVVCDATQSFVFALRLPAVGLLGPIPAGTLGRLNRLRVLSLRSNGISGGLPADFSNLTFLRSLFLQDNELSGDFPVSVTQLIRLTRLDLSSNNFSGSIPFSVNNLTQLTGLFLENNGFSGSLPSIPAITLTHFNVSNNKLNGSIPETLAKFSASSFAGNLALCGGPLPSCNPFFPSPAPSPTSALKPPQFPVEKKSRKLSIAAIVGIVVGAAFVAFLLLFLLLFCLRKRERRQPAKPPTTVVAARSVPAEAGTSSSKDDITGGSVETEKNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEAVGNINHENVVPLRAFYFSRDEKLLVSDYMAAGSLSSSLHGSRGSGRTPLDWDNRMKIALSAARGLAHLHVSGKLIHGNIKSSNILLRPNHDAAVSDFGLNPLFGTLTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQSSLGEEGIDLPRWVQSVVREEWTAEVFDVELMRHHNIEEEMVQLLQIAMSCVAAMPDQRPSIQEVVRMIEDLNRVETDDGLRQSSDDPSKGSEGHTPPLESRTTPPGAGVPP 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5556028 5559420 + Cp4.1LG18g04510.1 Cpe18g00458 484919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00458 658 SUPERFAMILY Protein kinase-like (PK-like) 354 615 IPR011009 -
Cpe18g00458 658 MobiDBLite consensus disorder prediction 620 658 - -
Cpe18g00458 658 PANTHER OS05G0588300 PROTEIN 13 636 - -
Cpe18g00458 658 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Cpe18g00458 658 MobiDBLite consensus disorder prediction 296 324 - -
Cpe18g00458 658 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Cpe18g00458 658 Pfam Protein kinase domain 353 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00458 658 PANTHER OS05G0480400 PROTEIN 13 636 - -
Cpe18g00458 658 SUPERFAMILY L domain-like 47 212 - -
Cpe18g00458 658 ProSiteProfiles Protein kinase domain profile. 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00458 658 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Cpe18g00458 658 Pfam Leucine Rich Repeat 96 118 IPR001611 GO:0005515
Cpe18g00458 658 MobiDBLite consensus disorder prediction 620 635 - -
Cpe18g00458 658 Gene3D Ribonuclease Inhibitor 188 234 IPR032675 -
Cpe18g00458 658 Gene3D Transferase(Phosphotransferase) domain 1 425 635 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00990 Cpe18g00458 CCT
Cpe11g01095 Cpe18g00458 CCT
Cpe04g01150 Cpe18g00458 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00913 Cpe-Chr13:7774455 Cpe18g00458 Cpe-Chr18:5556028 2.48E-86 dispersed
Cpe16g00693 Cpe-Chr16:7154115 Cpe18g00458 Cpe-Chr18:5556028 0 dispersed
Cpe18g00458 Cpe-Chr18:5556028 Cpe20g00161 Cpe-Chr20:907565 2.97E-160 dispersed
Cpe11g01095 Cpe-Chr11:9123791 Cpe18g00458 Cpe-Chr18:5556028 0 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe04g01150 Cpe-Chr4:9863766 0 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe07g01079 Cpe-Chr7:9550744 5.01E-110 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe07g00990 Cpe-Chr7:9019304 1.60E-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62985 PF00069 Pkinase 2.80E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00458 - - cmo:103501524 1061.98