Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00464 | ATGGCGACAATGGAGGTCGAGACCCAGCTAGCGACGTCGGCATCGGTCGGTACTTGCTCGGCGAAACAGGCGACGAACCAAGGCGAGGGTCTGAGGCAGTACTATCTTCAACATATTCACGAGCTCCAGCTCCAGGTTCGTCAAAAGACCCATAATCTGAATCGTCTTGAAGCTCAACGGAACGAGCTGAATTCGAAAGTGCGAATGCTCCGGGAAGAGCTGCAGCTGCTTCAAGAGCCAGGATCCTATGTTGGTGAAGTTGTTAAAGTCATGGGAAAGAACAAAGTTTTAGTTAAGGTTCACCCGGAAGGGAAATATGTTGTTGATATAGACAAAAGTATCGATATCACAAAAATCACACCTTCAACCAGAGTTGCTCTCCGTAACGACAGCTATGTTCTTCATTTAGTCTTGCCAAGCAAAGTAGATCCACTCGTTAATCTTATGAAAGTTGAAAAGGTTCCTGATTCTACTTATGATATGATTGGTGGTCTCGACCAGCAAATAAAAGAAATAAAAGAGGTTATTGAACTCCCCATTAAGCATCCTGAACTATTTGAGAGTCTTGGAATAGCTCAACCAAAGGGCGTTCTGCTATATGGACCACCTGGTACGGGGAAGACGCTGTTGGCTAGAGCAGTGGCTCACCATACAGATTGTACTTTCATCAGGGTTTCTGGGTCTGAATTGGTCCAGAAATATATTGGAGAAGGTTCTAGAATGGTTAGAGAGCTTTTCGTCATGGCCAGGGAGCATGCACCTTCTATCATTTTCATGGATGAAATCGATAGCATTGGGTCTGCTCGAATGGAATCTGGGAGTGGTAATGGTGATAGCGAGGTGCAGCGTACCATGTTGGAACTTCTTAACCAGCTTGATGGATTTGAAGCATCAAATAAGATCAAGGTACAGTGCATAAACGCCATATGTAATGAAGCGTTTAAACCAGATATTGGTTTTCGTTTAAAGTTGGTTTCTATCCGCTCGGCTGTATTACAGGTCTTGATGGCCACCAATAGGATCGATATCCTGGATCAAGCTCTTCTAAGGCCAGGACGAATTGACAGGAAGATTGAATTCCCAAATCCTAACGAGGATTCCCGGTTTGATATCTTGAAAATACATTCACGGAAAATGAATCTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGTGCATCTGGTGCAGAGCTCAAGAACAACGAATGGGATGGAGACGAGGTATGGGGCAGGGATGTGTTGAAGTCATCAATTGGCCAAACCCCTAGTGACTCTGATCCTCTGCTTGAGAATCAGCCCGATTCATCCCATGAAACCTCTGATGAAATTAAGAACGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCCTAGAGAGCGATGCCGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCACCTGCAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTCCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCGGCAATGGGTGGTTATGCATATATTATGGACAAAGATGGGGCATTCAGGAATTCTTTCAATGATGGATGGGACCGTATTCTGTCCAAACATCCTATTCCGTTTTATTATTGTATCGGGGTCCTGGCCTTCTTTGTTCTGCTCGGATTCTTCGGCCTCATACTACATTGTTCCTCCCTGAATAGTAATGATCCACGAGTTGCTGGCTGTCACAACTGTTGCTATGGATGGGGCATCTTGGATTGTTTCCCTGCGTCTATGGAGGCCTGCTTTGCACTTGTTATTGTCTTCGTTGTCATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCCACTATGGGTATTCAAAGAATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTGGTGGAGGATCTTCATGGTTGTTATACTCCTCCGAAATTGGAACCCGAACACGAACAGCACTTGAAAATGCTACAGCTTCTGTAA | 2142 | 44.3 | MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKNNEWDGDEVWGRDVLKSSIGQTPSDSDPLLENQPDSSHETSDEIKNEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLQVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFNDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL | 713 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5597500 | 5604934 | + | Cp4.1LG18g04710.1 | Cpe18g00464 | 484925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00464 | 713 | PANTHER | BNAA02G04630D PROTEIN | 331 | 403 | IPR035261 | GO:0036402 | |
Cpe18g00464 | 713 | Coils | Coil | 39 | 73 | - | - | |
Cpe18g00464 | 713 | CDD | bZIP_YAP | 37 | 77 | - | - | |
Cpe18g00464 | 713 | SMART | ringv_2 | 459 | 509 | IPR011016 | GO:0008270 | |
Cpe18g00464 | 713 | Pfam | ATPase family associated with various cellular activities (AAA) | 197 | 361 | IPR003959 | GO:0005524|GO:0016887 | |
Cpe18g00464 | 713 | MobiDBLite | consensus disorder prediction | 420 | 438 | - | - | |
Cpe18g00464 | 713 | Gene3D | - | 45 | 149 | IPR012340 | - | |
Cpe18g00464 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 155 | 404 | IPR027417 | - | |
Cpe18g00464 | 713 | Gene3D | - | 150 | 362 | IPR027417 | - | |
Cpe18g00464 | 713 | Gene3D | - | 363 | 405 | - | - | |
Cpe18g00464 | 713 | SUPERFAMILY | RING/U-box | 458 | 513 | - | - | |
Cpe18g00464 | 713 | MobiDBLite | consensus disorder prediction | 420 | 451 | - | - | |
Cpe18g00464 | 713 | PANTHER | 26S PROTEASOME REGULATORY SUBUNIT | 20 | 303 | - | - | |
Cpe18g00464 | 713 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 443 | 522 | IPR013083 | - | |
Cpe18g00464 | 713 | CDD | AAA | 163 | 361 | - | - | |
Cpe18g00464 | 713 | Pfam | RING-variant domain | 460 | 508 | IPR011016 | GO:0008270 | |
Cpe18g00464 | 713 | ProSitePatterns | AAA-protein family signature. | 332 | 350 | IPR003960 | GO:0005524|GO:0016887 | |
Cpe18g00464 | 713 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 452 | 515 | IPR011016 | GO:0008270 | |
Cpe18g00464 | 713 | PANTHER | BNAA02G04630D PROTEIN | 20 | 303 | IPR035261 | GO:0036402 | |
Cpe18g00464 | 713 | SMART | AAA_5 | 193 | 364 | IPR003593 | - | |
Cpe18g00464 | 713 | PANTHER | 26S PROTEASOME REGULATORY SUBUNIT | 331 | 403 | - | - | |
Cpe18g00464 | 713 | CDD | RING_CH-C4HC3_MARCH | 460 | 509 | - | - | |
Cpe18g00464 | 713 | Pfam | Proteasomal ATPase OB C-terminal domain | 84 | 139 | IPR032501 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01176 | Cpe-Chr4:10015254 | Cpe18g00464 | Cpe-Chr18:5597500 | 0 | dispersed | |
Cpe18g00464 | Cpe-Chr18:5597500 | Cpe12g00780 | Cpe-Chr12:7059134 | 2.64E-92 | dispersed | |
Cpe10g00582 | Cpe-Chr10:3390404 | Cpe18g00464 | Cpe-Chr18:5597500 | 1.17E-63 | transposed | |
Cpe11g01091 | Cpe-Chr11:9084664 | Cpe18g00464 | Cpe-Chr18:5597500 | 0 | wgd | |
Cpe18g00464 | Cpe-Chr18:5597500 | Cpe04g01175 | Cpe-Chr4:10012056 | 0 | wgd | |
Cpe18g00464 | Cpe-Chr18:5597500 | Cpe07g00968 | Cpe-Chr7:8757736 | 2.71E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00464 | K03066 | - | csv:101220074 | 675.241 |