Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00526 ATGGGCGTCGTCACCATTCTTCCAGATCTCGGCACTCAGATTTTCATCCCGGTCTGTGCCGTAGTAGGAATAGTCTTCTCTTTGGTGCAGTGGTACTATGTCTCTCAGGTTAAGCTGTCGCCTGGTCGAGATTCCACTCATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATCGAGGAGGAAGAAGGAGTCAACGACCATAACGTTGTTATTAAGTGTGCCGAAATTCAGAATGCTATCTCTGAGGGGGCAACCTCCTTCCTGTTCACGGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTGTTCCTTGGCTCAGTGGAGGGTTTTAGTACCGAGCCTCAAGCGTGCACTTATGACAAAACAAAGATTTGCAAGCCCGCTTTGGCGACGGCTATATTCAGCACTATATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACGTCTTCAAGTTGTACTATGGCGAAGATTGGGGTGGCCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTGGGTGACAATGTTGGGGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCTTCTTTCGGCAACAACCATGAGCTGACACCAATGCTCTATCCACTCATAGTTAGTTCTGTGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCTACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCTACTGTTCTAATGACCTTTGGAATTGCCATTGTTACTTGGGTGGCTGTTCCATCAACATTCACCATTTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGAAACTTTTCTTGTGCGTTGCTGTCGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCATACAGCCCTGTGCAGGATGTTGCTGATTCCTGCCGAACCGGAGCTGCTACAAATGTTATTTTTGGCTTGGCTTTGGGATACAAATCTGTCATTATCCCCATTTTTGCAATTGCAGTTAGCATTTTTGTTAGTTTCACCTTTGCTGCAATGTACGGCATTGCTGTTGCTGCTCTTGGAATGTTGAGTACAATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTCGATGCTGCAGGAAACACAACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCTCTCTTCGGCGCCTTCGTCAGCCGTGCTGGTGTCACTTCTGTTGACGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTAGGTGCTATGCTGCCGTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTCGAGGAGGTGCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGCACTGCCAAGCCCGACTACGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTAATTGTCGGTATCCTATTCGGGGTCGAAACTCTTTCTGGCGTTCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATCGCCATCTCTGCATCCAACACTGGAGGTGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGCGACACGATCGGAGACCCGCTCAAGGATACCTCCGGACCTTCTCTCAACATTCTCATCAAGCTGATGGCTGTGGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCACTCACGGTGGGCTTCTCTTCAGGCTCTAG 2307 47.25 MGVVTILPDLGTQIFIPVCAVVGIVFSLVQWYYVSQVKLSPGRDSTHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVEGFSTEPQACTYDKTKICKPALATAIFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINVFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWVAVPSTFTIFNFGTQKVVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFRL 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5942509 5946770 + Cp4.1LG18g05210.1 Cpe18g00526 484987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00526 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe18g00526 768 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 767 - -
Cpe18g00526 768 Pfam Inorganic H+ pyrophosphatase 24 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe18g00526 768 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe18g00526 768 PIRSF H+-PPtase 11 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cpe18g00526 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 10 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01213 Cpe18g00526 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00869 Cpe-Chr7:7829642 Cpe18g00526 Cpe-Chr18:5942509 0 dispersed
Cpe12g00525 Cpe-Chr12:5399897 Cpe18g00526 Cpe-Chr18:5942509 1.11E-151 dispersed
Cpe18g00526 Cpe-Chr18:5942509 Cpe04g01213 Cpe-Chr4:10262933 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00526 K23025 - csv:101222673 1423.68