Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00543 ATGGCATTTGATCAGAACGCGATTCCCACTGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACGCCGGTCGCTACTTCTGGGCGTAATCCCCAATGGGTTGCCCCCAAGCTTCCCTGCGACGTTGCTAACACAGACTCCGTACCCGTTCCTTGTAAGGGAAATGTCTCCGATATGGGATTTATTGAGGGAGGATATGGAAATGTGGTTACTGGCGTTACGGCTTGGTGCCCTCGAATGCCTCCTCCTCTCGCGCACACTGCAATGGTTCCTGCCGCAGGGTTTGGTTACTGCTCGAACCTGAATGCTTGGGGCAATCGTGGTGGTGCCAATGCTATTGAGTTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTTGAGTCATCGAGATGGGGGAGGTGGCATGGAATTTTCGAGCAATAATATCGTAATGGGGTCTGGGGATAGTACCAATTTATGCAATAAGGTTGCTGCCAACGGTGATCATATCAATAGTGATAGCACCTCTGGATTTAGCTCCCCCTTGGGGAATTCAGCTGGTGGGAATGCGGTTGATCAAGTGAGAGAGGAGGGGGGAAACAGTTCCGTTCCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGTGGCAAGATTTTTCCAAGACCGAGTGATGGTATGTTGAGATATATTGGAGGTCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGTTTGTGCGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGACGCTTTAGTATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCTGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTGCAGGTATGGTGCAATTTGGCGACGTACACGATAGTGGGCAGAGATATGTTGAAACAGTGAATACGATATTTGATGGCGTTGGTGGCCGTATTACAAGGAAAGAGAGCTTTACAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGCGACCGAGGCAATGGATATCTCATATAACGATCTAGGGGTTGTGGGTGAGCCTCCATCCACAACATTGTCCGTACCTGAAGGAAATTTAGGTACTTCAGTTGCTATTGGCCCTGGATTAGTGAAGGTAGATACTGTCTCTGCAGTTTTTGTAGATGCCTCGGCTGTTCCATCAAGTATTCCTGTGATTAACTCTGTTCCTCCTGAAAGTTCTTCGCAGCCAGAGGCGGAGTTAGGAAGGTCGGTGCCTGCTACTCTGACGCAACAGCAACCAGATATTGGCTTTCCTCCACCCGTGCCTCAATTGCAGCCTACTGTTGATCCTCGCCAAGCAGCATGTGTGGACTTTATACAATTTCGTCCACAGCTAGGCTTTTCAAATTCTCATCATCTAGGGACATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATAACCCCTCATCAGTTTGTCCCTGCAGTTCACATGAGGATGGCTCCCTCTTCTAACCTCAGTATTATGCCTAATACCTATCAATCGTTGGTGCAATATCCACAATCCCAACCGGAATATTTTTCCAACGCAAGCACATCTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACGCCAGATTCCAGCTCCTCCAGTATCAGTGGAGGTTGGATATGGTTTACATCATGTACCATGGTCTGATCAGACAGTTATATCTGATGAATTGGTATCCCAACATCAGGTAACTTTTGCTGAGAAAATCAAGAGGTTGGATGACTGTTACCTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCAACGTTGCAGGATAAAAGAGAAAATTTGACAAACCCTGTATCTGATTCAAAATTTTCGTATTACAGTCACCACCCTGAAGATCATTTAGCAGCCCATCCAATGAAAAATATTACAGAAACTGGAGCTTTGGGGCAACAAACTATTGAACATGGTGTTGGAATGCAAACCAGGATATTTAATCCTATGGATCCAGAAGTTGAAAAATCTTCAGTGGAGGCTATTGGCTTCCCACATCATATTGGCGGTCAACATGAGAACGATAACACACTAAAAGATCGACCTAATATTGATCATAGTAAGATCTCAGCTCAGCAGGGTGCTCTTGGGAGGCAAGGTGATTTTCCGTCACCCCATGTTGCCGTTGTAGAACAGATTCCTCAGCCTGGCAAAGTTGATACTCTCCAGCACCAGTATGCAGCTGTAGAGAATCGGTTCCATCCAAATTTAGACGTGGATAAACACAATATTTGCTTTGGAGGTGCTCCTATTCTTGCTTCAGAGTACAGCAGTCATGAAAATCCGAAGGTGTATTCTAATAGTCCTCATGGCATTATTCCAAATCAAAATGCTACCCACACTGGAATTTGGTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTTAAGTATATGCCCAACTGATATTTGTCCTAATCTGGATCACTGCAAATCACCCACTGAAAGAACTAGGAAGGAGGACAATTTTGGTAGCTGTTCACAACCAGTCTCTGAGATAGAAGTTCTACTTGATAACAACTCTGTAAAGCCAATAGTGGTTCTCGACACAAATCATGTGAAACCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAGTGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCGGGGGCTATCCTGGAACATTAACACAATCAGAAAATGGGATACAACCTCCTGTTGAGTCCAATAAAGTATGTCTTAGCAGAAATCCCCAGTTATTTGACACGAAGACTGACCATACGAATAATCAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTTGAATCTAGGATGGTATCTGGTGATGTTGAATCTGAATCTTTGCCTACCAGGACTGGAAATGTGCAGGACACTGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAACTTACAGCATGACGATCATCTTTTGCCTCCTAGACCAAATAAAATTCAACCAAGGAATGAAGCTGTTACCACCAGGGAACCCTTGACAGAGAGTCCTTTCAGGAATATTGGTGAACTAAAAATGGAAGCATTTCTGGATGATGGAGTCTGTCACCCATTGGTTAAGTCAAACAAGGGCTCTTCAGAGGAACAAATTAAGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCCGACTTGCATGAAAAAAGTGATTCAGTTTGTGAGATTAGCACAGAAGGAGATGTTCAAAATAATGATGATGTCAGGACAAGACAGTCAGAAAAATCAAATCTGGGTTTTCCAATGTCAGAAGGCTATGGCCACTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTGGGGTCTGGCACCTTTGGCACTGTTTATCATGGAAAATGGAGAGGGACTGATGTTGCTATCAAACGAATCAATGATAGGTGTTTTGCTGGGAAGCCGTCTGAACAAGATCGCATGAGAGAAGATTTTTGGAATGAAGCAAATAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTATTGTGCTTGATGGTCCTGGAGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGTAAGCGCCTCTTGATTGCTATGGATGTGGCTTTTGGTATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTAAAAAGTGATAATCTGCTCGTTAACCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGCGACTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCTTGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGACGTGTTTTCCTTTGGTATCGTCTTGTGGGAGCTCCTCACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATCATAGGTGGCATAGTAAGCAACACATTGCGCCCGGAAGTACCGGAGTCTTGTGATCCAGAATGGAGATCACTGATGGAGAGATGCTGGTCATCAGAACCATCAGAGAGGCCAAGCTTCACCGACATTGCACATGAATTGCGCTCCATGGCTGCAAAGGTTCACCCGAAAGTACCCAATCAGCAGCATTAG 4353 44.29 MAFDQNAIPTGLRPLNVARTLVEDPHLTPVATSGRNPQWVAPKLPCDVANTDSVPVPCKGNVSDMGFIEGGYGNVVTGVTAWCPRMPPPLAHTAMVPAAGFGYCSNLNAWGNRGGANAIEFASSCMTVGINHSTNLSHRDGGGGMEFSSNNIVMGSGDSTNLCNKVAANGDHINSDSTSGFSSPLGNSAGGNAVDQVREEGGNSSVPKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNEFVRKMVDTCGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSAGMVQFGDVHDSGQRYVETVNTIFDGVGGRITRKESFTSATSTQNSDLSATEAMDISYNDLGVVGEPPSTTLSVPEGNLGTSVAIGPGLVKVDTVSAVFVDASAVPSSIPVINSVPPESSSQPEAELGRSVPATLTQQQPDIGFPPPVPQLQPTVDPRQAACVDFIQFRPQLGFSNSHHLGTSGSMFIQQPNTLGITPHQFVPAVHMRMAPSSNLSIMPNTYQSLVQYPQSQPEYFSNASTSGPRFVQLSAEQGYNSRQIPAPPVSVEVGYGLHHVPWSDQTVISDELVSQHQVTFAEKIKRLDDCYLCQKAVPHAHSNSTLQDKRENLTNPVSDSKFSYYSHHPEDHLAAHPMKNITETGALGQQTIEHGVGMQTRIFNPMDPEVEKSSVEAIGFPHHIGGQHENDNTLKDRPNIDHSKISAQQGALGRQGDFPSPHVAVVEQIPQPGKVDTLQHQYAAVENRFHPNLDVDKHNICFGGAPILASEYSSHENPKVYSNSPHGIIPNQNATHTGIWYDHLRPIVGNLESLSICPTDICPNLDHCKSPTERTRKEDNFGSCSQPVSEIEVLLDNNSVKPIVVLDTNHVKPTTFACSSSEVPYLMSERPVESSEVAQPPVGGYPGTLTQSENGIQPPVESNKVCLSRNPQLFDTKTDHTNNQVPVSAEWKEDTSLFESRMVSGDVESESLPTRTGNVQDTANSLFSNQDPWNLQHDDHLLPPRPNKIQPRNEAVTTREPLTESPFRNIGELKMEAFLDDGVCHPLVKSNKGSSEEQIKKDLQAVAEGVAASVLQSAQSSNSDLHEKSDSVCEISTEGDVQNNDDVRTRQSEKSNLGFPMSEGYGHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEANKLADLHHPNVVAFYGIVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPSFTDIAHELRSMAAKVHPKVPNQQH 1450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6006405 6012529 + Cp4.1LG18g05440.1 Cpe18g00543 485004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00543 1450 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 166 1441 - -
Cpe18g00543 1450 PRINTS Tyrosine kinase catalytic domain signature 1253 1266 IPR001245 GO:0004672|GO:0006468
Cpe18g00543 1450 PRINTS Tyrosine kinase catalytic domain signature 1290 1308 IPR001245 GO:0004672|GO:0006468
Cpe18g00543 1450 PRINTS Tyrosine kinase catalytic domain signature 1361 1383 IPR001245 GO:0004672|GO:0006468
Cpe18g00543 1450 PRINTS Tyrosine kinase catalytic domain signature 1405 1427 IPR001245 GO:0004672|GO:0006468
Cpe18g00543 1450 Pfam PB1 domain 230 313 IPR000270 GO:0005515
Cpe18g00543 1450 PANTHER SERINE-THREONINE PROTEIN KINASE 166 1441 - -
Cpe18g00543 1450 ProSitePatterns Protein kinases ATP-binding region signature. 1177 1208 IPR017441 GO:0005524
Cpe18g00543 1450 SUPERFAMILY Protein kinase-like (PK-like) 1161 1432 IPR011009 -
Cpe18g00543 1450 SMART serkin_6 1171 1437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00543 1450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1296 1308 IPR008271 GO:0004672|GO:0006468
Cpe18g00543 1450 SMART PB1_new 225 314 IPR000270 GO:0005515
Cpe18g00543 1450 SUPERFAMILY CAD & PB1 domains 226 317 - -
Cpe18g00543 1450 CDD STKc_MAP3K-like 1177 1434 - -
Cpe18g00543 1450 ProSiteProfiles Protein kinase domain profile. 1171 1445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00543 1450 CDD PB1_UP2 214 312 - -
Cpe18g00543 1450 Pfam Protein tyrosine and serine/threonine kinase 1172 1434 IPR001245 GO:0004672|GO:0006468
Cpe18g00543 1450 Gene3D Transferase(Phosphotransferase) domain 1 1259 1450 - -
Cpe18g00543 1450 MobiDBLite consensus disorder prediction 177 205 - -
Cpe18g00543 1450 Gene3D - 232 314 - -
Cpe18g00543 1450 Gene3D Phosphorylase Kinase; domain 1 1164 1258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00814 Cpe-Chr1:4853770 Cpe18g00543 Cpe-Chr18:6006405 4.88E-36 dispersed
Cpe18g00543 Cpe-Chr18:6006405 Cpe20g00145 Cpe-Chr20:821271 7.86E-49 dispersed
Cpe19g00986 Cpe-Chr19:6920258 Cpe18g00543 Cpe-Chr18:6006405 5.39E-19 dispersed
Cpe18g00543 Cpe-Chr18:6006405 Cpe16g00711 Cpe-Chr16:7264664 8.39E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62991 PF07714 PK_Tyr_Ser-Thr 4.70E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00543 - - csv:101203826 2373.59