Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00548 | GATCATGAACAGAATGCTACATGCTCATCTGCCACATCCGCCAACCTGTTACTGGAACAGCCCGTAGGGTCTGGGAAGCCACAGAAGGTATACTCATTTAGCAACCCACAGCCGATCATGGGGTTTCTTGAATCAACTCCCTCGCCTTCTCCATTTCCTATAAGAAGAGCCTGCCGGAGAAAGAAGGGATATTCCAAGTCTATGGGTGATATTTCGCTGGAAGATGTCAAGAATGAGAACGTTGATCTAGAACGGATTCCTGTGGAGGAAGTTTTTGAGAAACTAAAGTGCACTAAAGAAGGATTGAGCACAGCAGAAGGAGAAAAGAGACTCCAAATTTTTGGTCCTAACAAGCTTGAAGAGAAAAAAGAGAGCAAGGTTTTGAAGTTCTTGGGGTTTATGTGGAATCCTCTATCATGGGTTATGGAATCTGCGGCAATCATGGCCATTGCTCTGGCTAATGGAGGGGGGAAACCACCGGATTGGCAAGATTTTGTTGGGATTATTGTGTTGTTGATCATTAACTCTACCATTAGTTTCATTGAAGAGAACAATGCTGGAAATGCAGCTGCTGCTCTCATGGCTGAGGAGGCAGCAATTCTGGTTCCAGGGGATGTGATTAGCGTTAAATTAGGAGATATTATCCCGGCCGATGCACGTCTCTTAGAAGGCGATCCTCTGAAGATCGACCAGTCTGCTCTTACCGGTGAATCTTTGCCTGTCACCAAGAATCCTGGTGATGGAGTGTTCTCTGGCTCCACCTGCAAGCAAGGAGAGATCGAGGCCGTTGTTATTGCCACTGGAGTGCATACCTTTTTTGGAAAGGCAGCTCACCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACCGCCATTGGAAACTTCTGTATATGCTCGATCGCGGTCGGGATGGTCATTGAGATTCTAGTAATGTTTGCCATCCAGCACAGAGCATACAGGGAGGGCATTGACAACTTGTTGGTGCTTCTCATTGGAGGCATTCCCATAGCAATGCCAACAGTTCTTTCAGTAACCATGGCCATCGGATCGCATCGCCTTTCGCAGCAAGGTGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTCCTGTGCAGTGACAAGACAGGAACTCTCACCCTGAACAAGCTCACAGTAGACAAGTCCCTGATTGAGGAACGGATTCCTGTGGAGGAAGTTTTTGAGAAACTAAAGTGCACTAAAGAAGGATTGAGCACAGCAGAAGGAGAAAAGAGACTCCAAATTTTTGCTATGGGCGATATTTCGTTGGAAGATGTCAAGAATGAGAACGTTGATCTAGAACGGATTCCTGTGGAGGAAGTTTTTGAGAAACTAAAGTGCACTAAAGATGGATTGAGCACAGCAGAAGGAGAAAAGAGACTCCAAATTTTTGGTCCTAACAAGCTTGAAGAGAAAAAAGAGAGCAAGGTTTTGAAGTTCTTGGGGTTTATGTGGAATCCTCTATCATGGGTTATGGAATCTGCGGCAATCATGGCCATTGCTCTGGCTAATGGAGGGGGGAAACCACCGGATTGGCAAGATTTTGTTGGGATTATTGTGTTGTTGATCATTAACTCTACCATTAGTTTCATTGAAGAGAACAATGCTGGAAATGCAGCTGCTGCTCTCATGGCTGGAGATATTATCCCGGCCGATGCACGTCTCTTAGAAGGCGATCCTCTGAAGATTGACCAGTCTGCTCTTACGGGTGAATCTTTGCCTGTCACCAAGAATCCTGGTGATGGAGTGTTCTCTGGCTCCACCTGCAAGCAAGGTGAGATTGAGGCCGTTGTTATTGCCACTGGAGTGCATACCTTTTTCGGAAAGGCAGCTCACCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACGGCCATTGGAAACTTCTGTATATGCTCGATCGCGGTCGGGATGGTCATTGAGATTCTAGTAATGTTTGCTATCCAGCACAGAGCATACAGAGAGGGCATTGACAACTTGTTGGTGCTTCTCATTGGAGGCATTCCCATAGCAATGCCAACCGTTCTTTCAGTAACCATGGCCATCGGATCGCATCGTCTTTCGCAGCAAGGTGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTCCTGTGCAGTGACAAGACAGGAACTCTCACCCTGAACAAGCTCACAGTAGACAAGTCCCTGATTGAGTCCACGAAACCCCAATTCTCCTTCTGCTTCTGCCCTAAACACTTTCCGTTTCCCATGGCCTCTCAAGCTCTCACTGAGTACGAGCGCAAGAGGCTCGAGAACATTCGCCGCAACGATGAAATGATGGCCGCCCTCAAGCTTCAGTCCAAAGCCTCTGAACTCTCTGCTGCCTCCAAGCAGTTGAAACCAAATGGGAAAGGGTTTATCCGAAGACCAAACCTAAAAATCGATACTACCATAGTTTTACGGCGCTCTTTGCGTGCTAGAGGAATTCTCCCTGATGCCAAAAGTGTTTCAGATGATATTACGAAGCCGGCTACTAAAATTAAATCGATAGGATAG | 2589 | 46.93 | DHEQNATCSSATSANLLLEQPVGSGKPQKVYSFSNPQPIMGFLESTPSPSPFPIRRACRRKKGYSKSMGDISLEDVKNENVDLERIPVEEVFEKLKCTKEGLSTAEGEKRLQIFGPNKLEEKKESKVLKFLGFMWNPLSWVMESAAIMAIALANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAGNAAAALMAEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEILVMFAIQHRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEERIPVEEVFEKLKCTKEGLSTAEGEKRLQIFAMGDISLEDVKNENVDLERIPVEEVFEKLKCTKDGLSTAEGEKRLQIFGPNKLEEKKESKVLKFLGFMWNPLSWVMESAAIMAIALANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAGNAAAALMAGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEILVMFAIQHRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIESTKPQFSFCFCPKHFPFPMASQALTEYERKRLENIRRNDEMMAALKLQSKASELSAASKQLKPNGKGFIRRPNLKIDTTIVLRRSLRARGILPDAKSVSDDITKPATKIKSIG | 862 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6048594 | 6069055 | - | Cp4.1LG18g05540.1 | Cpe18g00548 | 485009 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00548 | 862 | SMART | Cation_ATPase_N_a_2 | 82 | 154 | IPR004014 | - | |
Cpe18g00548 | 862 | SMART | Cation_ATPase_N_a_2 | 447 | 519 | IPR004014 | - | |
Cpe18g00548 | 862 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 557 | 752 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe18g00548 | 862 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 197 | 410 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe18g00548 | 862 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 68 | 400 | - | - | |
Cpe18g00548 | 862 | Pfam | E1-E2 ATPase | 198 | 359 | - | - | |
Cpe18g00548 | 862 | Pfam | E1-E2 ATPase | 558 | 708 | - | - | |
Cpe18g00548 | 862 | PANTHER | PLASMA MEMBRANE ATPASE | 401 | 432 | - | - | |
Cpe18g00548 | 862 | PANTHER | PLASMA MEMBRANE ATPASE | 68 | 400 | - | - | |
Cpe18g00548 | 862 | PANTHER | PLASMA MEMBRANE ATPASE | 561 | 750 | - | - | |
Cpe18g00548 | 862 | PANTHER | PLASMA MEMBRANE ATPASE | 433 | 561 | - | - | |
Cpe18g00548 | 862 | SUPERFAMILY | Calcium ATPase, transduction domain A | 200 | 280 | IPR008250 | - | |
Cpe18g00548 | 862 | PRINTS | P-type cation-transporting ATPase superfamily signature | 594 | 613 | - | - | |
Cpe18g00548 | 862 | PRINTS | P-type cation-transporting ATPase superfamily signature | 380 | 394 | - | - | |
Cpe18g00548 | 862 | PRINTS | P-type cation-transporting ATPase superfamily signature | 230 | 244 | - | - | |
Cpe18g00548 | 862 | Gene3D | - | 498 | 560 | - | - | |
Cpe18g00548 | 862 | Gene3D | - | 241 | 384 | - | - | |
Cpe18g00548 | 862 | Gene3D | - | 133 | 213 | - | - | |
Cpe18g00548 | 862 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 401 | 432 | - | - | |
Cpe18g00548 | 862 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 561 | 750 | - | - | |
Cpe18g00548 | 862 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 433 | 561 | - | - | |
Cpe18g00548 | 862 | Gene3D | - | 631 | 725 | - | - | |
Cpe18g00548 | 862 | Gene3D | - | 726 | 738 | IPR023214 | - | |
Cpe18g00548 | 862 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 446 | 724 | IPR023298 | - | |
Cpe18g00548 | 862 | Gene3D | - | 561 | 630 | - | - | |
Cpe18g00548 | 862 | Pfam | Cation transporter/ATPase, N-terminus | 451 | 513 | IPR004014 | - | |
Cpe18g00548 | 862 | Pfam | Cation transporter/ATPase, N-terminus | 86 | 148 | IPR004014 | - | |
Cpe18g00548 | 862 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 731 | 737 | IPR018303 | - | |
Cpe18g00548 | 862 | SUPERFAMILY | Calcium ATPase, transduction domain A | 558 | 629 | IPR008250 | - | |
Cpe18g00548 | 862 | Gene3D | - | 739 | 750 | IPR023299 | GO:0000166 | |
Cpe18g00548 | 862 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 382 | 388 | IPR018303 | - | |
Cpe18g00548 | 862 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 81 | 375 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02378 | Cpe-Chr1:19893753 | Cpe18g00548 | Cpe-Chr18:6048594 | 2.67E-94 | dispersed | |
Cpe02g01627 | Cpe-Chr2:13611946 | Cpe18g00548 | Cpe-Chr18:6048594 | 0 | dispersed | |
Cpe03g01159 | Cpe-Chr3:9511861 | Cpe18g00548 | Cpe-Chr18:6048594 | 3.07E-132 | dispersed | |
Cpe04g01319 | Cpe-Chr4:10842080 | Cpe18g00548 | Cpe-Chr18:6048594 | 2.36E-145 | dispersed | |
Cpe04g01518 | Cpe-Chr4:11954464 | Cpe18g00548 | Cpe-Chr18:6048594 | 2.65E-180 | dispersed | |
Cpe07g00741 | Cpe-Chr7:6414722 | Cpe18g00548 | Cpe-Chr18:6048594 | 6.78E-174 | dispersed | |
Cpe11g00633 | Cpe-Chr11:4054155 | Cpe18g00548 | Cpe-Chr18:6048594 | 8.86E-175 | dispersed | |
Cpe18g00548 | Cpe-Chr18:6048594 | Cpe18g00807 | Cpe-Chr18:7531941 | 5.66E-175 | dispersed | |
Cpe18g00546 | Cpe-Chr18:6037359 | Cpe18g00548 | Cpe-Chr18:6048594 | 6.71E-34 | proximal | |
Cpe18g00547 | Cpe-Chr18:6045900 | Cpe18g00548 | Cpe-Chr18:6048594 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00548 | K01535 | - | csv:101214655 | 600.127 |