Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00576 ATGATTAAAAGCTTTCCGGCTATGGCAGCGAAAACTGAAGGTAAAGCCATAGGCATCGACCTCGGCACCACCTACAGCTGCGTCGGGGTTTGGCTTAACGATCGCGTCGAGATTATCCCCAACGATCAAGGTAACCGAACCACCCCCTCCTATGTAGCTTTCACTGACACCGAGCGTTTGATCGGTGATGCGGCCAAGAATCAGGTCGCTATGAACCCTCAGAACACTGTCTTCGACGCCAAGCGCTTGATCGGCCGGCGACTCTCCGATCCCTCTGTTCAGAGTGACATGAAGCTCTGGCCATTTAAAGTGGTCGCTGGACCCGGCGAAAAGCCGATGATCATCGTCAATTACAAAGGCGAGGAGAAGCAGTTCGCTCCGGAGGAGATTTCTTCTATGGTTTTGATTAAGATGAGAGAAATCGCCGAAGCTTTTCTAGGCCAAACTATCAAGAACGCCGTTATTACAGTCCCTGCTTATTTCAACGATTCACAGAGACAAGCGACGAAAGATGCGGGTGCCATTGCTGGACTCAACGTGTTGCGTATCATCAATGAACCAACGGCGGCTGCGATTGCATATGGTCTGGATAAAAAGGCTTCTCGTAGAGGCGAACAGAACGTCCTGATCTTCGACCTCGGCGGTGGAACTTTCGACGTGTCACTCTTGACCATAGAAGAGGGAATTTTCGAGGTCAAGGCCACAGCCGGCGATACTCATCTCGGCGGCGAAGATTTCGACAACAGGCTCGTAAATCACTTCGTCACAGAGTTCAAGCGCAAGAACAAGAAAGACATAAGCGGCAACGCTAGGGCACTGAGGAGATTGAGGACGGCCTGTGAGCGAGCCAAAAGAGCGCTGTCGTCGACAACGCAAACCACGATTGAAGTCGATTCGCTTTACGAAGGAATTGACTTTTACGCGACCATTACGAGGGCTAGATTTGAGGAATTGTGTATGGATATGTTCATGAAATGCATGGAGCCTGTGGAGAAATGTATCCGTGATGCTAAAATTGACAAGAGCCAAGTTCATGAGGTTGTTTTAGTCGGTGGATCCACTAGAATTCCCAAAGTTCAGCAGCTTCTGCAGGATTACTTCAATGGAAAGGAGCTCTGTAAAAGTATCAATCCGGATGAGGCCGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATTCTAAGTGGAGAAGGAGACGAGAAAGTTCAAGATCTGCTACTTCTCGATGTCACGCCGCTCAGTCTCGGTCTAGAGACGGCCGGTGGCGTCATGACAGTCCTAATTCCTAGGAACACAACAATCCCAACAAAGAAGGAACAAATTTTCTCGACGTACTCTGACAACCAGCCAGGAGTTTTGATCCAAGTCTACGAAGGAGAGCGAGCCAGAACCAAAGACAATAATCTGCTCGGAAAGTTCGAGCTCACTGGCATTCCTCCAGCACCCAGAGGCGTCCCCCAAATCAATGTCGTCTTCGACATTGATGCAAATGGCATTCTCAACGTATCAGCAGAGGACAAGACTGCAGGGGTGAAGAACAAGATCACAATCACCAACGACAAGGGGCGAATGAGCAAGGACGAGATAGAGAGGCTGGTGAAGGAGGCAGAGAAGTACAAAGCAGAGGATGAAGAGGTGAAGAAGAAGGTGGAGGCCAAGAATGCGTTGGAGAATTATGCTTACAACATGAGGAATACGGTGAGGGATGAGAAATTTGCAGGGAAATTGAATCCAGATGATAAGCAGAAGATCGAGAAGTCCGTGGAGGACACCATCGAGTGGTTGGATAGGAACCAGCTGGCGGAGGTTGATGAACTTGAGGACAAGCTGAAGGAGCTCGAGGGTGTCTGTAATCCCATCATTGCTAGGATGTACCAGGGCGGTGCTGGCGGCGGTGCTCCCATGGGCGATGATATGCCTGGTGGTGGGTCCGCCGGGTCTGGCGGTGCTGGGCCGAAGATTGAGGAGAGAAAGGTTGTAATTCTCTGTCGATCGCCAGCCATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAATCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCAAAGCCGTTGAAGAACTTGGACGGTCAAGTTTGCGAGATCTGTGGTGATGAAGTGGGGCTTACTGTGGATGGTGATCTGTTTGTTGCTTGCAATGAATGTGGTTTTCCAGTCTGCAGACCCTGCTATGAGTATGAACGAAGAGAAGGAAGCCAACTCTGCCCTCAGTGTAAAACTAGATATAAGAGACTCAAAGGGAGTCCAAGGGTCGAGGGAGACGATGATGAAGAAGACATAGATGACATTGAACATGAGTTCAACATTGATGATGAAAGGAACAACCACAGTCATCTGGCAGAAGCTATGCTTCATGGCAAGATGAGCTATGGTAGAGGCCTTGATGATGATGAAAATGCACAGTATGGAAGAACACAGCCAGTAAATGGTGAGCTTCCTTTATCTTCTCAAGGTTATGGAGAGCAGATGTTATCTTCTTCGCTGCACAAACGTGTGCATCCATATCCGGTTTCTGAACCAGCTAGACAGCCACTATCAAGGAAGGTACCGATAGCATCTAGCAAAATTAATCCTTACCGGATGGTTATTGTGGCCCGGCTCGTTATTCTCGCCTTCTTCCTTCGTTATCGGATTCTAAATCCAGTGCATGATGCATTGGGTTTGTGGCTAACTTCTGTGATATGTGAAATCTGGTTTGCATTCTCATGGATCCTCGATCAGTTCCCCAAATGGTTCCCAATTGATCGTGAAACCTACTTGGATCGTCTAACTCTAAGATATGAACGAGAGGGTGAACCTAATTTGCTTGCTCCAGTAGACATCTTCGTCAGTACTGTAGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCCATGGACTATCCAGTTGATAAGGTTTCATGCTATGTTTCGGACGATGGAGCGTCCATGCTTACCTTTGAAGCAATGTCTGAAACTGCAGAATTTGCAAGGAAATGGGTCCCTTTTTGTAAGAAGTTCTCCATAGAACCACGAGCACCTGAAATGTACTTTTGTGAGAAGATTGATTATCTCAAGGATAAAGTCCAACCAACATTTGTGAAAGAGCGACGAGCAATGAAGAGAGAATATGAAGAGTTCAAGGTCAGAATAAATGCTCAAGTAGCGAAAGCCATGAAAGTTCCCACAGAGGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCATCCCGGTATGATCCAAGTTTTTCTAGGTCACAGTGGAGGCCTTGATGCTGAAGGGAATGAACTCCCCCGCCTAGTTTATGTATCTCGTGAGAAAAGACCAGGTTTCCAGCATCACAAGAAAGCCGGTGCCATGAATTCCTTGATCCGTGTCTCTGCAGTGCTTACAAATGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCAGCACGAGAAGCCATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAGTCTGTTATGTGCAATTTCCACAAAGATTTGATGGAATAGATAGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCCGTATATGTTGGCACAGGGTGCGTCTTTAGGAGGCAAGCTTTATATGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGCGATTGTTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAGCTCTAAAAGTGGGGTAGATGGAGATGCTGCAGTGATGGAAGATGACAAGGAGCTACTAATGTCGCAAATGAATTTTGAAAAGAAATTTGGACACTCATCAATTTTTGTTACCTCAACTTTGATGGAAGAAGGCGGTGTTCCACCCTCCTCCGGTCCAGCAGCCCTGCTTAAGGAAGCAATTCATGTTATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGTACCGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCGATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATCAATTTGTCTGATCGGCTGAACCAGGTGCTTCGGTGGGCGCTCGGGTCCATTGAAATTTTTTTCAGCAACCACTGCCCTGTTTGGTATGGCTATAAGGGTGGAAAGCTAAAGTGGCTAGAGAGATTTGCATATGTCAACACCACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTACTGTACCCTCCCTGCAATCTGCCTGCTTACGGATAAGTTTATCATGCCACCGATCAGCACATTTGCAAGTTTCTACTTCATTGCATTGTTTCTTTCCATTTTTGCTACGGGTATTCTTGAACTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTACAAGGTCTATTGAAGGTTTTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCAACAGATGACGAAGACTTTGGAGAATTATATGCCTTCAAATGGACCACTCTGCTAATCCCTCCCACAACTATTTTGATCATCAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCTCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTTCATCTCTACCCATTCCTTAAAGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCGTTTGTGATGAAAACAAAGGGACCTGATACAAAGCAATGTGGACTAAATTGCTGA 4965 46.71 MIKSFPAMAAKTEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFKVVAGPGEKPMIIVNYKGEEKQFAPEEISSMVLIKMREIAEAFLGQTIKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRRGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKNKKDISGNARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFMKCMEPVEKCIRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVSAEDKTAGVKNKITITNDKGRMSKDEIERLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTVRDEKFAGKLNPDDKQKIEKSVEDTIEWLDRNQLAEVDELEDKLKELEGVCNPIIARMYQGGAGGGAPMGDDMPGGGSAGSGGAGPKIEERKVVILCRSPAMEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNNHSHLAEAMLHGKMSYGRGLDDDENAQYGRTQPVNGELPLSSQGYGEQMLSSSLHKRVHPYPVSEPARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLTLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKVSCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAMKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNSLIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQVGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKSSKSGVDGDAAVMEDDKELLMSQMNFEKKFGHSSIFVTSTLMEEGGVPPSSGPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASFYFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQCGLNC 1654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6213170 6221811 - Cp4.1LG18g05840.1 Cpe18g00576 485037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00576 1654 Pfam Hsp70 protein 16 625 IPR013126 GO:0005524|GO:0140662
Cpe18g00576 1654 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 845 1654 - -
Cpe18g00576 1654 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 667 791 - -
Cpe18g00576 1654 Pfam Zinc-binding RING-finger 693 769 IPR027934 -
Cpe18g00576 1654 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 399 556 IPR029047 -
Cpe18g00576 1654 Gene3D Actin; Chain A, domain 4 242 325 - -
Cpe18g00576 1654 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1055 1240 IPR029044 -
Cpe18g00576 1654 Gene3D - 199 373 - -
Cpe18g00576 1654 ProSitePatterns Heat shock hsp70 proteins family signature 1. 19 26 IPR018181 -
Cpe18g00576 1654 Coils Coil 273 293 - -
Cpe18g00576 1654 ProSitePatterns Heat shock hsp70 proteins family signature 2. 210 223 IPR018181 -
Cpe18g00576 1654 Gene3D - 17 391 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 15 28 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 403 422 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 216 226 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 484 500 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 344 360 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 376 396 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 43 55 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 65 73 - -
Cpe18g00576 1654 PRINTS 70kDa heat shock protein signature 153 173 - -
Cpe18g00576 1654 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 550 631 IPR029048 -
Cpe18g00576 1654 Coils Coil 521 552 - -
Cpe18g00576 1654 ProSiteProfiles Zinc finger RING-type profile. 703 749 IPR001841 -
Cpe18g00576 1654 SUPERFAMILY RING/U-box 687 773 - -
Cpe18g00576 1654 CDD HSPA1-2_6-8-like_NBD 16 394 - -
Cpe18g00576 1654 ProSitePatterns Heat shock hsp70 proteins family signature 3. 347 361 IPR018181 -
Cpe18g00576 1654 CDD mRING-HC-C4C4_CesA_plant 701 751 - -
Cpe18g00576 1654 SUPERFAMILY Nucleotide-diphospho-sugar transferases 962 1478 IPR029044 -
Cpe18g00576 1654 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 398 551 IPR029047 -
Cpe18g00576 1654 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 667 791 - -
Cpe18g00576 1654 Gene3D - 78 133 - -
Cpe18g00576 1654 SUPERFAMILY Actin-like ATPase domain 15 198 IPR043129 -
Cpe18g00576 1654 Gene3D - 552 626 IPR029048 -
Cpe18g00576 1654 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 686 775 IPR013083 -
Cpe18g00576 1654 Coils Coil 595 615 - -
Cpe18g00576 1654 Pfam Cellulose synthase 949 1648 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe18g00576 1654 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 845 1654 - -
Cpe18g00576 1654 SUPERFAMILY Actin-like ATPase domain 204 395 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01430 Cpe-Chr3:11495538 Cpe18g00576 Cpe-Chr18:6213170 1.71E-81 dispersed
Cpe05g00794 Cpe-Chr5:4925261 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe09g00795 Cpe-Chr9:7404230 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe12g00697 Cpe-Chr12:6602357 Cpe18g00576 Cpe-Chr18:6213170 2.79E-81 dispersed
Cpe12g01174 Cpe-Chr12:9650072 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe13g00106 Cpe-Chr13:758999 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe13g00846 Cpe-Chr13:7456870 Cpe18g00576 Cpe-Chr18:6213170 9.04E-54 dispersed
Cpe14g00238 Cpe-Chr14:1382940 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe16g00175 Cpe-Chr16:3887833 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe16g00428 Cpe-Chr16:5629327 Cpe18g00576 Cpe-Chr18:6213170 7.63E-33 dispersed
Cpe17g00567 Cpe-Chr17:4649107 Cpe18g00576 Cpe-Chr18:6213170 9.39E-77 dispersed
Cpe17g00688 Cpe-Chr17:5498729 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe18g00576 Cpe-Chr18:6213170 Cpe19g00060 Cpe-Chr19:447906 0 dispersed
Cpe19g00364 Cpe-Chr19:3302661 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe18g00576 Cpe-Chr18:6213170 Cpe10g01182 Cpe-Chr10:8775512 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00576 K10999 - csv:101214842 1959.5