Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00576 | ATGATTAAAAGCTTTCCGGCTATGGCAGCGAAAACTGAAGGTAAAGCCATAGGCATCGACCTCGGCACCACCTACAGCTGCGTCGGGGTTTGGCTTAACGATCGCGTCGAGATTATCCCCAACGATCAAGGTAACCGAACCACCCCCTCCTATGTAGCTTTCACTGACACCGAGCGTTTGATCGGTGATGCGGCCAAGAATCAGGTCGCTATGAACCCTCAGAACACTGTCTTCGACGCCAAGCGCTTGATCGGCCGGCGACTCTCCGATCCCTCTGTTCAGAGTGACATGAAGCTCTGGCCATTTAAAGTGGTCGCTGGACCCGGCGAAAAGCCGATGATCATCGTCAATTACAAAGGCGAGGAGAAGCAGTTCGCTCCGGAGGAGATTTCTTCTATGGTTTTGATTAAGATGAGAGAAATCGCCGAAGCTTTTCTAGGCCAAACTATCAAGAACGCCGTTATTACAGTCCCTGCTTATTTCAACGATTCACAGAGACAAGCGACGAAAGATGCGGGTGCCATTGCTGGACTCAACGTGTTGCGTATCATCAATGAACCAACGGCGGCTGCGATTGCATATGGTCTGGATAAAAAGGCTTCTCGTAGAGGCGAACAGAACGTCCTGATCTTCGACCTCGGCGGTGGAACTTTCGACGTGTCACTCTTGACCATAGAAGAGGGAATTTTCGAGGTCAAGGCCACAGCCGGCGATACTCATCTCGGCGGCGAAGATTTCGACAACAGGCTCGTAAATCACTTCGTCACAGAGTTCAAGCGCAAGAACAAGAAAGACATAAGCGGCAACGCTAGGGCACTGAGGAGATTGAGGACGGCCTGTGAGCGAGCCAAAAGAGCGCTGTCGTCGACAACGCAAACCACGATTGAAGTCGATTCGCTTTACGAAGGAATTGACTTTTACGCGACCATTACGAGGGCTAGATTTGAGGAATTGTGTATGGATATGTTCATGAAATGCATGGAGCCTGTGGAGAAATGTATCCGTGATGCTAAAATTGACAAGAGCCAAGTTCATGAGGTTGTTTTAGTCGGTGGATCCACTAGAATTCCCAAAGTTCAGCAGCTTCTGCAGGATTACTTCAATGGAAAGGAGCTCTGTAAAAGTATCAATCCGGATGAGGCCGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATTCTAAGTGGAGAAGGAGACGAGAAAGTTCAAGATCTGCTACTTCTCGATGTCACGCCGCTCAGTCTCGGTCTAGAGACGGCCGGTGGCGTCATGACAGTCCTAATTCCTAGGAACACAACAATCCCAACAAAGAAGGAACAAATTTTCTCGACGTACTCTGACAACCAGCCAGGAGTTTTGATCCAAGTCTACGAAGGAGAGCGAGCCAGAACCAAAGACAATAATCTGCTCGGAAAGTTCGAGCTCACTGGCATTCCTCCAGCACCCAGAGGCGTCCCCCAAATCAATGTCGTCTTCGACATTGATGCAAATGGCATTCTCAACGTATCAGCAGAGGACAAGACTGCAGGGGTGAAGAACAAGATCACAATCACCAACGACAAGGGGCGAATGAGCAAGGACGAGATAGAGAGGCTGGTGAAGGAGGCAGAGAAGTACAAAGCAGAGGATGAAGAGGTGAAGAAGAAGGTGGAGGCCAAGAATGCGTTGGAGAATTATGCTTACAACATGAGGAATACGGTGAGGGATGAGAAATTTGCAGGGAAATTGAATCCAGATGATAAGCAGAAGATCGAGAAGTCCGTGGAGGACACCATCGAGTGGTTGGATAGGAACCAGCTGGCGGAGGTTGATGAACTTGAGGACAAGCTGAAGGAGCTCGAGGGTGTCTGTAATCCCATCATTGCTAGGATGTACCAGGGCGGTGCTGGCGGCGGTGCTCCCATGGGCGATGATATGCCTGGTGGTGGGTCCGCCGGGTCTGGCGGTGCTGGGCCGAAGATTGAGGAGAGAAAGGTTGTAATTCTCTGTCGATCGCCAGCCATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAATCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCAAAGCCGTTGAAGAACTTGGACGGTCAAGTTTGCGAGATCTGTGGTGATGAAGTGGGGCTTACTGTGGATGGTGATCTGTTTGTTGCTTGCAATGAATGTGGTTTTCCAGTCTGCAGACCCTGCTATGAGTATGAACGAAGAGAAGGAAGCCAACTCTGCCCTCAGTGTAAAACTAGATATAAGAGACTCAAAGGGAGTCCAAGGGTCGAGGGAGACGATGATGAAGAAGACATAGATGACATTGAACATGAGTTCAACATTGATGATGAAAGGAACAACCACAGTCATCTGGCAGAAGCTATGCTTCATGGCAAGATGAGCTATGGTAGAGGCCTTGATGATGATGAAAATGCACAGTATGGAAGAACACAGCCAGTAAATGGTGAGCTTCCTTTATCTTCTCAAGGTTATGGAGAGCAGATGTTATCTTCTTCGCTGCACAAACGTGTGCATCCATATCCGGTTTCTGAACCAGCTAGACAGCCACTATCAAGGAAGGTACCGATAGCATCTAGCAAAATTAATCCTTACCGGATGGTTATTGTGGCCCGGCTCGTTATTCTCGCCTTCTTCCTTCGTTATCGGATTCTAAATCCAGTGCATGATGCATTGGGTTTGTGGCTAACTTCTGTGATATGTGAAATCTGGTTTGCATTCTCATGGATCCTCGATCAGTTCCCCAAATGGTTCCCAATTGATCGTGAAACCTACTTGGATCGTCTAACTCTAAGATATGAACGAGAGGGTGAACCTAATTTGCTTGCTCCAGTAGACATCTTCGTCAGTACTGTAGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCCATGGACTATCCAGTTGATAAGGTTTCATGCTATGTTTCGGACGATGGAGCGTCCATGCTTACCTTTGAAGCAATGTCTGAAACTGCAGAATTTGCAAGGAAATGGGTCCCTTTTTGTAAGAAGTTCTCCATAGAACCACGAGCACCTGAAATGTACTTTTGTGAGAAGATTGATTATCTCAAGGATAAAGTCCAACCAACATTTGTGAAAGAGCGACGAGCAATGAAGAGAGAATATGAAGAGTTCAAGGTCAGAATAAATGCTCAAGTAGCGAAAGCCATGAAAGTTCCCACAGAGGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCATCCCGGTATGATCCAAGTTTTTCTAGGTCACAGTGGAGGCCTTGATGCTGAAGGGAATGAACTCCCCCGCCTAGTTTATGTATCTCGTGAGAAAAGACCAGGTTTCCAGCATCACAAGAAAGCCGGTGCCATGAATTCCTTGATCCGTGTCTCTGCAGTGCTTACAAATGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCAGCACGAGAAGCCATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAGTCTGTTATGTGCAATTTCCACAAAGATTTGATGGAATAGATAGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCCGTATATGTTGGCACAGGGTGCGTCTTTAGGAGGCAAGCTTTATATGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGCGATTGTTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAGCTCTAAAAGTGGGGTAGATGGAGATGCTGCAGTGATGGAAGATGACAAGGAGCTACTAATGTCGCAAATGAATTTTGAAAAGAAATTTGGACACTCATCAATTTTTGTTACCTCAACTTTGATGGAAGAAGGCGGTGTTCCACCCTCCTCCGGTCCAGCAGCCCTGCTTAAGGAAGCAATTCATGTTATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGTACCGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCGATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATCAATTTGTCTGATCGGCTGAACCAGGTGCTTCGGTGGGCGCTCGGGTCCATTGAAATTTTTTTCAGCAACCACTGCCCTGTTTGGTATGGCTATAAGGGTGGAAAGCTAAAGTGGCTAGAGAGATTTGCATATGTCAACACCACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTACTGTACCCTCCCTGCAATCTGCCTGCTTACGGATAAGTTTATCATGCCACCGATCAGCACATTTGCAAGTTTCTACTTCATTGCATTGTTTCTTTCCATTTTTGCTACGGGTATTCTTGAACTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTACAAGGTCTATTGAAGGTTTTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCAACAGATGACGAAGACTTTGGAGAATTATATGCCTTCAAATGGACCACTCTGCTAATCCCTCCCACAACTATTTTGATCATCAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCTCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTTCATCTCTACCCATTCCTTAAAGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCGTTTGTGATGAAAACAAAGGGACCTGATACAAAGCAATGTGGACTAAATTGCTGA | 4965 | 46.71 | MIKSFPAMAAKTEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFKVVAGPGEKPMIIVNYKGEEKQFAPEEISSMVLIKMREIAEAFLGQTIKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRRGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKNKKDISGNARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFMKCMEPVEKCIRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVSAEDKTAGVKNKITITNDKGRMSKDEIERLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTVRDEKFAGKLNPDDKQKIEKSVEDTIEWLDRNQLAEVDELEDKLKELEGVCNPIIARMYQGGAGGGAPMGDDMPGGGSAGSGGAGPKIEERKVVILCRSPAMEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNNHSHLAEAMLHGKMSYGRGLDDDENAQYGRTQPVNGELPLSSQGYGEQMLSSSLHKRVHPYPVSEPARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLTLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKVSCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAMKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNSLIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQVGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKSSKSGVDGDAAVMEDDKELLMSQMNFEKKFGHSSIFVTSTLMEEGGVPPSSGPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASFYFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQCGLNC | 1654 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6213170 | 6221811 | - | Cp4.1LG18g05840.1 | Cpe18g00576 | 485037 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00576 | 1654 | Pfam | Hsp70 protein | 16 | 625 | IPR013126 | GO:0005524|GO:0140662 | |
Cpe18g00576 | 1654 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 845 | 1654 | - | - | |
Cpe18g00576 | 1654 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 667 | 791 | - | - | |
Cpe18g00576 | 1654 | Pfam | Zinc-binding RING-finger | 693 | 769 | IPR027934 | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 399 | 556 | IPR029047 | - | |
Cpe18g00576 | 1654 | Gene3D | Actin; Chain A, domain 4 | 242 | 325 | - | - | |
Cpe18g00576 | 1654 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1055 | 1240 | IPR029044 | - | |
Cpe18g00576 | 1654 | Gene3D | - | 199 | 373 | - | - | |
Cpe18g00576 | 1654 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 19 | 26 | IPR018181 | - | |
Cpe18g00576 | 1654 | Coils | Coil | 273 | 293 | - | - | |
Cpe18g00576 | 1654 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 210 | 223 | IPR018181 | - | |
Cpe18g00576 | 1654 | Gene3D | - | 17 | 391 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 15 | 28 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 403 | 422 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 216 | 226 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 484 | 500 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 344 | 360 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 376 | 396 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 43 | 55 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 65 | 73 | - | - | |
Cpe18g00576 | 1654 | PRINTS | 70kDa heat shock protein signature | 153 | 173 | - | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 550 | 631 | IPR029048 | - | |
Cpe18g00576 | 1654 | Coils | Coil | 521 | 552 | - | - | |
Cpe18g00576 | 1654 | ProSiteProfiles | Zinc finger RING-type profile. | 703 | 749 | IPR001841 | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | RING/U-box | 687 | 773 | - | - | |
Cpe18g00576 | 1654 | CDD | HSPA1-2_6-8-like_NBD | 16 | 394 | - | - | |
Cpe18g00576 | 1654 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 347 | 361 | IPR018181 | - | |
Cpe18g00576 | 1654 | CDD | mRING-HC-C4C4_CesA_plant | 701 | 751 | - | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 962 | 1478 | IPR029044 | - | |
Cpe18g00576 | 1654 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 398 | 551 | IPR029047 | - | |
Cpe18g00576 | 1654 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 667 | 791 | - | - | |
Cpe18g00576 | 1654 | Gene3D | - | 78 | 133 | - | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | Actin-like ATPase domain | 15 | 198 | IPR043129 | - | |
Cpe18g00576 | 1654 | Gene3D | - | 552 | 626 | IPR029048 | - | |
Cpe18g00576 | 1654 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 686 | 775 | IPR013083 | - | |
Cpe18g00576 | 1654 | Coils | Coil | 595 | 615 | - | - | |
Cpe18g00576 | 1654 | Pfam | Cellulose synthase | 949 | 1648 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Cpe18g00576 | 1654 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 845 | 1654 | - | - | |
Cpe18g00576 | 1654 | SUPERFAMILY | Actin-like ATPase domain | 204 | 395 | IPR043129 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01430 | Cpe-Chr3:11495538 | Cpe18g00576 | Cpe-Chr18:6213170 | 1.71E-81 | dispersed | |
Cpe05g00794 | Cpe-Chr5:4925261 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe09g00795 | Cpe-Chr9:7404230 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe12g00697 | Cpe-Chr12:6602357 | Cpe18g00576 | Cpe-Chr18:6213170 | 2.79E-81 | dispersed | |
Cpe12g01174 | Cpe-Chr12:9650072 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe13g00106 | Cpe-Chr13:758999 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe13g00846 | Cpe-Chr13:7456870 | Cpe18g00576 | Cpe-Chr18:6213170 | 9.04E-54 | dispersed | |
Cpe14g00238 | Cpe-Chr14:1382940 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe16g00175 | Cpe-Chr16:3887833 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe16g00428 | Cpe-Chr16:5629327 | Cpe18g00576 | Cpe-Chr18:6213170 | 7.63E-33 | dispersed | |
Cpe17g00567 | Cpe-Chr17:4649107 | Cpe18g00576 | Cpe-Chr18:6213170 | 9.39E-77 | dispersed | |
Cpe17g00688 | Cpe-Chr17:5498729 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe18g00576 | Cpe-Chr18:6213170 | Cpe19g00060 | Cpe-Chr19:447906 | 0 | dispersed | |
Cpe19g00364 | Cpe-Chr19:3302661 | Cpe18g00576 | Cpe-Chr18:6213170 | 0 | dispersed | |
Cpe18g00576 | Cpe-Chr18:6213170 | Cpe10g01182 | Cpe-Chr10:8775512 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00576 | K10999 | - | csv:101214842 | 1959.5 |