Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00586 ATGGCTTTTGCATTTTCACGCTCTTCAGGCAATATGGTCTGCTGCTGCTTTTTCTTTTTTCTGCATTTCTTCGCAGCCATGGTTCCTAAACTCTTCTGTTTGATCATTCTCTCTTCTGCCTTTCTCTGCCTTTCTTATGAACCTCGGAACCCTGAAGTGCAAGCTCTGATCAATTTGAAGACGGCATTGAATGATCCGCACGGCGTGCTCAGCAATTGGGATGAGGACTCGGTGGACCCTTGTAGCTGGGCAATGATCACCTGCTCCCCTGAGAACCTCGTTATAGGACTGGGAGCTCCGAGCCAGTCTCTTTCTGGAAGCTTGTCTGGAGCGATTGGGAACCTCACTAATCTTCGCCAAGTGCTGCTGCAGAACAACAACATTTCCGGTCCAATTCCCATTGAACTTGGAGCTCTCCCGTTGCTGCAAACACTAGATCTCTCTAACAATCGGTTCTCGGGCCCAATACCAGCATCTTTTGCTCAGCTGAATGGTCTACGCTATCTGAGGGTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTCGTCTTTGGCCAAAATTCCCCAGCTTGCTTTCTTGGATTTGTCTTTCAACAATCTCAGTGGACCAGTGCCTGTGTTTCCAGCCAGAACATTCAATGTGGTGGGAAATCCAATGATATGTGGAAATAGTCCTAATGAAGGTTGCTCTGGCTCAGCCAACGCTGTTCCTCTTTCTTTCTCTCTAGAATCGTCCCCTGGAAGACTCAGGTCCAAAAGAATTGCAGTGGCACTTGGGGTCAGCCTCAGCTGTGCGTTTCTGATAATCCTAGCACTTGGAATTCTGTGGCGCAGAAAAACTCAGAAGACTAAAACCATCCTAGACTTCAATGGAAAACCAGCCTTGGACTGGAACACGAGGAAGAGAATAGCAATTGGAGCAGCCAGGGAGCTAATTACTGGAATGCGAGCTCATGAACATGGGAAAACAACTAACCAAAAAGGCGCCATGCTTGAGTGGGTGAAAAAGATACAACAGGAAAAGAAAGTGGAATTGCTTGTGGACAGAGAGCTTGGCAACAACTATGATCAGATTGAAGTTGGGGAAATGTTACAAGTGGCTCTTCTTTGCACTCAGTATTTACCTGCTCACCGTCCCAAGATGTCGGAGGTGGTCCGAATGCTTGAAGGGGATGGCCTTGTTGAGAAATGGGCTGCTTCCCACACCCATAATGACTTAAATGTCAACCTCTTTCATTCACGGAACAGCTGCAAAAGTTCATACAATCCCACAAATGCATTGAAGAGTAATGGCAATGATCATTCAAGCATGTTAAGTTTGACATTGGACGACGACGACGAGGAGCGATCTTTAGACTCCTATGCCATGGAACTCTCCGGTCCAAGATAG 1389 47.01 MAFAFSRSSGNMVCCCFFFFLHFFAAMVPKLFCLIILSSAFLCLSYEPRNPEVQALINLKTALNDPHGVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIGNLTNLRQVLLQNNNISGPIPIELGALPLLQTLDLSNNRFSGPIPASFAQLNGLRYLRVNNNSLSGPFPSSLAKIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGNSPNEGCSGSANAVPLSFSLESSPGRLRSKRIAVALGVSLSCAFLIILALGILWRRKTQKTKTILDFNGKPALDWNTRKRIAIGAARELITGMRAHEHGKTTNQKGAMLEWVKKIQQEKKVELLVDRELGNNYDQIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLVEKWAASHTHNDLNVNLFHSRNSCKSSYNPTNALKSNGNDHSSMLSLTLDDDDEERSLDSYAMELSGPR 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6281911 6286788 + Cp4.1LG18g05760.1 Cpe18g00586 485047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00586 462 MobiDBLite consensus disorder prediction 422 438 - -
Cpe18g00586 462 SUPERFAMILY L domain-like 50 214 - -
Cpe18g00586 462 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Cpe18g00586 462 Pfam Leucine rich repeat N-terminal domain 50 89 IPR013210 -
Cpe18g00586 462 Gene3D Ribonuclease Inhibitor 49 231 IPR032675 -
Cpe18g00586 462 Gene3D Transferase(Phosphotransferase) domain 1 307 407 - -
Cpe18g00586 462 SUPERFAMILY Protein kinase-like (PK-like) 310 411 IPR011009 -
Cpe18g00586 462 CDD TM_EGFR-like 251 284 - -
Cpe18g00586 462 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 31 291 - -
Cpe18g00586 462 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 310 462 - -
Cpe18g00586 462 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 291 - -
Cpe18g00586 462 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 310 462 - -
Cpe18g00586 462 MobiDBLite consensus disorder prediction 422 444 - -
Cpe18g00586 462 PRINTS Leucine-rich repeat signature 142 155 - -
Cpe18g00586 462 PRINTS Leucine-rich repeat signature 187 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00586 Cpe-Chr18:6281911 Cpe07g00017 Cpe-Chr7:106748 7.39E-105 dispersed
Cpe18g00586 Cpe-Chr18:6281911 Cpe04g01269 Cpe-Chr4:10531399 1.23E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00586 - - cmax:111485761 557.755