Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00610 ATGCAGAGGAGGTATCCGGAGAGGACGAACTCCATGAGGGAGAAAAGGAGCTTGGAGGGTGGAGAAGATGAGCTGCCAGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTCTGCTCATCATTGGAACCAATTCTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGTCCTGATGGAAGGAACTTGCAACTGCACTTTAAGACTAGATTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAACAATCCATGTCGTTCTGGTTGATGCCAACACAGGCCAATTAGTAACGTCTGGTCAGGAAGCCTTGTCTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAAGCCATGTGGTTAAAGAGCGTGAAGGTAAGAGGCCTCTGTTGACTGGTGAGTTGCAGGTTACCCTCAAGGAAGGTGTTGGAACACTAGGGGATCTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGTTTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTACGTATTCGTGAAGCCAAAACTGAAGCTTTTACAGTTAAAGATCACCGAGGAGAACTGTATAAAAAACATTACCCACCTGCATTAAATGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAGCGGCTAAACAAAAATCAAATATTCTCAGTTGAAGATTTTCTCCGAATGGTGGTTCGAGATTCTCAAAAGCTACGGAGCATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGATGCTCTCCTGGAACATGCTAAGACCTGTGTCCTGGGCGGGAAGCTGTATATTTATTATCCAGAGGAAACAAGAAATGTTGGTGTTGTTTTTAACAATATCTATGAGCTCAATGGACTGATTACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACACTAGTGAACAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGCAAGTCACTTTTGAGCTCTAAGCAGTCTAAGAAGTCGAATGCATCCCGAAATGACTTTCAAGGCGGTCATCTTGATCTTTCTAATACTCTAGATCATGGGTCAATCCCCCGCATGCCAGTGTCAGTTCAGCCTCAGCAGCCTGTAATGGATTCAGGACTCTCAGTTGCAGGGTATGATGATAATGCCGCAAGATATTCAACCCAGCCTCAGTTTGTGAATTCAACTTCTCGACCACAGTTTGACAACTCTCAATATACTTCTAATGAGTTGATTGGCAATTCTAACCAAGTTCATATCTCAAGAAATGACAGTAATGCTTTTGGTTTGGCTCTTGCTCCTCCGCAAGCATCATCTTCAGGGTTCCAGATGCTTGGTTCTTCTACTCAGGAAACTAATCTGAATCCATTTGAATGGTCGAACAATAGAGACAAGGGAGCTGACGACTTCTTTTCAGAGGACGAGATTCGTATGAGAAGTCATGAACTGCTTGAAAATGAAGATATGCAACATTTGTTGCGAATGTTTAGCATGGGAGGGCATGCATCTGGTAACGTCAATGATGAGGGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTCGACGATCGCAGCCGTTCTGGAAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCTGAGAGACGCGCACAGCTTGTCGAGTTAGATGAGGAATAG 1905 43.73 MQRRYPERTNSMREKRSLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFKTRLSLPLFTGGKVEGEQGATIHVVLVDANTGQLVTSGQEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGELQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNQIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWDALLEHAKTCVLGGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQSKKSNASRNDFQGGHLDLSNTLDHGSIPRMPVSVQPQQPVMDSGLSVAGYDDNAARYSTQPQFVNSTSRPQFDNSQYTSNELIGNSNQVHISRNDSNAFGLALAPPQASSSGFQMLGSSTQETNLNPFEWSNNRDKGADDFFSEDEIRMRSHELLENEDMQHLLRMFSMGGHASGNVNDEGFSFPSFMPSPMPNFDDRSRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQLVELDEE 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6407433 6417089 + Cp4.1LG18g06100.1 Cpe18g00610 485071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00610 634 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Cpe18g00610 634 PANTHER CALMODULIN-BINDING PROTEIN 60 B 10 632 - -
Cpe18g00610 634 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cpe18g00610 634 MobiDBLite consensus disorder prediction 395 420 - -
Cpe18g00610 634 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cpe18g00610 634 PANTHER OS02G0177800 PROTEIN 10 632 IPR012416 GO:0005516
Cpe18g00610 634 MobiDBLite consensus disorder prediction 1 29 - -
Cpe18g00610 634 MobiDBLite consensus disorder prediction 395 412 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01294 Cpe18g00610 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01537 Cpe-Chr4:12066980 Cpe18g00610 Cpe-Chr18:6407433 8.59E-65 dispersed
Cpe18g00610 Cpe-Chr18:6407433 Cpe20g00130 Cpe-Chr20:723081 4.64E-60 dispersed
Cpe18g00610 Cpe-Chr18:6407433 Cpe04g01294 Cpe-Chr4:10669450 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00610 - - cmo:103494282 1154.04