Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00614 ATGGCAGCCCACCAGATTCTTGGCACCGAAACCGATATCTCCGAGGAGTTTTTGATAGCTCGAATCATCGACCTTCATGGAAGCATCTCGAGGCTTGAAACCCTAAAGCCATGCAAGGAAGTGAACGGCCTGTTCACCAAGCTTGTGAAATTTTGCATTTTGCCTTGTTCAATAGATGTCACCACATTGCCACCCCATTTACAAGCCATTCGTGAGAGCCTCATACTTTTATGTGGCCGAGCCGAGGGGTTACTCGAGTTAGAATTCTCGACCATGCTCGGAAAAATCCCGAAACCTCTCAACAATCTTACTCTATTTCCATATTATGACAACTACATCAAATTAGCCCACCTTGAATACAAGATATTGATTGACAATGGAATTGTGAATCCTAAAAGGGTAGCTTTTGTGGGGTCCGGTCCTCTTCCTCTAACTTCCATTATATTGGCCATGCAGCACATGAAGAACACGTATTTCGACAACTACGACATCGATAGCATGGCAAATGAGGTGGCGGGAAAGATCGTGGCTTCGGACGGTGAGTTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAGGAGAAGAGCTTGAGGGATACGATTGTGTGTTCTTGGCAGCTCTTGTGGGGTTGAAGAAGGAAGATAAAGTGAAGATTTTAAGTCACTTGAGAAAGTATATGAAACAAGGTGGGGCTTTGGTTGTGAGAAGTGCTAAAGGAGGTCGAGCCTTTTTGTACCCTGTGGTTGACGTCGCCGACATGGCTGGCTTTGACATTCTCTCTATTTTTCATCCCTCCGATGATGTCGTCAATTCCGTTCTCTTGGCTCGCAAGCCTATACTCATATGA 858 45.34 MAAHQILGTETDISEEFLIARIIDLHGSISRLETLKPCKEVNGLFTKLVKFCILPCSIDVTTLPPHLQAIRESLILLCGRAEGLLELEFSTMLGKIPKPLNNLTLFPYYDNYIKLAHLEYKILIDNGIVNPKRVAFVGSGPLPLTSIILAMQHMKNTYFDNYDIDSMANEVAGKIVASDGELEGRMKFWTRDIVEVGEELEGYDCVFLAALVGLKKEDKVKILSHLRKYMKQGGALVVRSAKGGRAFLYPVVDVADMAGFDILSIFHPSDDVVNSVLLARKPILI 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6427881 6428738 - Cp4.1LG18g06210.1 Cpe18g00614 485075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00614 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 285 IPR004298 GO:0030410|GO:0030418
Cpe18g00614 285 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Cpe18g00614 285 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Cpe18g00614 285 Gene3D Vaccinia Virus protein VP39 20 282 IPR029063 -
Cpe18g00614 285 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Cpe18g00614 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00861 Cpe-Chr7:7787265 Cpe18g00614 Cpe-Chr18:6427881 5.07E-91 dispersed
Cpe18g00614 Cpe-Chr18:6427881 Cpe11g00876 Cpe-Chr11:7106470 2.93E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00614 K05953 - csv:101209464 446.432