Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00614 | ATGGCAGCCCACCAGATTCTTGGCACCGAAACCGATATCTCCGAGGAGTTTTTGATAGCTCGAATCATCGACCTTCATGGAAGCATCTCGAGGCTTGAAACCCTAAAGCCATGCAAGGAAGTGAACGGCCTGTTCACCAAGCTTGTGAAATTTTGCATTTTGCCTTGTTCAATAGATGTCACCACATTGCCACCCCATTTACAAGCCATTCGTGAGAGCCTCATACTTTTATGTGGCCGAGCCGAGGGGTTACTCGAGTTAGAATTCTCGACCATGCTCGGAAAAATCCCGAAACCTCTCAACAATCTTACTCTATTTCCATATTATGACAACTACATCAAATTAGCCCACCTTGAATACAAGATATTGATTGACAATGGAATTGTGAATCCTAAAAGGGTAGCTTTTGTGGGGTCCGGTCCTCTTCCTCTAACTTCCATTATATTGGCCATGCAGCACATGAAGAACACGTATTTCGACAACTACGACATCGATAGCATGGCAAATGAGGTGGCGGGAAAGATCGTGGCTTCGGACGGTGAGTTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAGGAGAAGAGCTTGAGGGATACGATTGTGTGTTCTTGGCAGCTCTTGTGGGGTTGAAGAAGGAAGATAAAGTGAAGATTTTAAGTCACTTGAGAAAGTATATGAAACAAGGTGGGGCTTTGGTTGTGAGAAGTGCTAAAGGAGGTCGAGCCTTTTTGTACCCTGTGGTTGACGTCGCCGACATGGCTGGCTTTGACATTCTCTCTATTTTTCATCCCTCCGATGATGTCGTCAATTCCGTTCTCTTGGCTCGCAAGCCTATACTCATATGA | 858 | 45.34 | MAAHQILGTETDISEEFLIARIIDLHGSISRLETLKPCKEVNGLFTKLVKFCILPCSIDVTTLPPHLQAIRESLILLCGRAEGLLELEFSTMLGKIPKPLNNLTLFPYYDNYIKLAHLEYKILIDNGIVNPKRVAFVGSGPLPLTSIILAMQHMKNTYFDNYDIDSMANEVAGKIVASDGELEGRMKFWTRDIVEVGEELEGYDCVFLAALVGLKKEDKVKILSHLRKYMKQGGALVVRSAKGGRAFLYPVVDVADMAGFDILSIFHPSDDVVNSVLLARKPILI | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6427881 | 6428738 | - | Cp4.1LG18g06210.1 | Cpe18g00614 | 485075 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00614 | 285 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 11 | 285 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe18g00614 | 285 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 283 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe18g00614 | 285 | Pfam | Nicotianamine synthase protein | 15 | 282 | IPR004298 | GO:0030410|GO:0030418 | |
Cpe18g00614 | 285 | Gene3D | Vaccinia Virus protein VP39 | 20 | 282 | IPR029063 | - | |
Cpe18g00614 | 285 | PANTHER | NICOTIANAMINE SYNTHASE | 1 | 283 | - | - | |
Cpe18g00614 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 122 | 240 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00861 | Cpe-Chr7:7787265 | Cpe18g00614 | Cpe-Chr18:6427881 | 5.07E-91 | dispersed | |
Cpe18g00614 | Cpe-Chr18:6427881 | Cpe11g00876 | Cpe-Chr11:7106470 | 2.93E-94 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00614 | K05953 | - | csv:101209464 | 446.432 |