Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00631 ATGGCGGCGGCGGCGGCGGCCGGAAACAATGGTGGCGCGTTGCAGAAGAGTTACTTTGATGTGTTGGGGATTTGCTGTTCTTCAGAAATTCCTCTGATTGAGAATATATTGAAGGAAATTGAAGGGATTAAAGAGATTAAAGTGATTGTCGCTACAAGAACTCTCATTGTTCTTCATGATAATCTCCTCGTTTCTCAAGCACAAATTGTTAAAGCCCTAAATCAAGCAAGACTTGAAGCGAACGTTAGAGCATACGGAGACCAGCAGAAAAATCACCGGAAAAAATGGCCCAGCCCTTATGCGGTGGCGAGTGGGCTGTTGCTGCTGGTTTCGTTTCTCAAATATGTGAATCCTGTTTTCAAATGGGTGGCTTTGGCTGCCGTCGCCGCCGGTATCTGGCCCATTGCCCTCAAAAGCTTCACCGCCGTTCGCCATCTCAGAATCGACATCAACATTCTTGCTTTAATCGCCGTGATCGGGACAATTGTGCTGAATGATTATTTGGAAGCGGCCACCATCGTCTTCCTCTTCACAATCGCCGAATGGCTCGAATCCAGAGCCGGCCACAAGGCCAACGCCGTCATGTCGTCCCTTCTAAGCATCGCCCCTCAGAAAGCGGTTCTAGCCGACACCGGCGAAGTTGTCGGCGCCGACGAGGTCAAAATGGGGACTCTGCTGGCGGTGAAGGCTGGTGAGGACATACCCATTGATGGAATCGTTGAGGAGGGAAAATGCGAAGTGGATGAGAAAACCCTTACAGGTGAATCTTTCCCTGTTGCCAAACAGAAGGATTCCACTGTTTGGGCTGGTACCATTAATTTAAACGGCTATGTTACTGTAAAAACTACTGCTCTTGCTGAAGATTGTGTGGTGGCTAAAATGGCTAAGCTGGTTGAAGAGGCTCAGAATAGTAAATCTAGAACTCAAAGGTTTATTGACAAATGTGCTAAATTCTATACTCCAGCTGTTATAATCATATCAACTGGCATAGCGGTGATTCCATTTGCTTTGAGACTGCACAATCGCAGCCATTGGTTTCACTTGGCACTGGTTGTGCTAGTGAGCGCGTGTCCCTGTGCACTCATCCTTTCGACCCCTGTTGCGTCTTTCTGTGCACTTACCAAGGCAGCAACCTCTGGCCTGTTAATCAAAGGAGGTGACTGCCTTGAAACTCTTGGCAAGATTAAGATCATGGCTTTTGATAAAACTGGGACAATAACAAGAGGTGAATTTATGGTCACTGAATTTCAAGCTCTTGATAAGGAAAATATAAGCTTAGACACATTGCTATACTGGGTGTCGAGCATTGAGAGCAAGTCCAGTCATCCAATGGCAGCTGCACTTGTTGACCATGGAAGATCACTATCCATTAACCCCAAACCTGAAAATGTGGATGACTTTCAAAATTTCCCTGGAGAAGGTGTCCATGGGAGAATTGATGGGAAAGACATCTATATTGGAAATCGAAAAATTGCTACAAGAGCCAATTGTGCAACAGTCCCAGAGATCAAAGATGAAGCAAAGGATGGAAGGACTGTTGGATACGTTTTCTGTGGAACTACTGCAGCTGGTATATTTACTCTATCTGATTCTTGTAGAACCGGAGCTAAGGAGGCCATGGCTGAGATCCGATCTCTCGAACTTCTACCTGAAGACAAGACAAGACTCATCAACGACTTCAAAAGGGAGGGACCAACAGCCATGATTGGAGATGGTTTAAACGACGCCCCTGCCTTGGCGACAGCTGATATTGGTATATCAATGGGAATCTCTGGTTCAGCTCTCGCAATAGAAACTGGAGATGTAATTCTAATGACTAATGACATCAGGAAAATTCCAAAGGCCATTCGACTCGCAAGAAGAGCTAATAGGAAAGTAATCGAAAATGTGATTCTTTCGGTCGCTCCTAGGACTGCTATACTCGGCCTGGCATTTGGTGGTCATCCACTTGTTTGGGCAGCTGTTCTTGCTGATGTTGGTGCCTGTGTGCTAGTTATCCTTAACAGCAGTGTAAAACCCTTTGAACATGAGCATTGCGTCCATAACAACCAGCCCGATGAACATGAACATTGCGTCCATAACAACCAGCCCGATGAACATGAACACTGCGTCCATAACAACCAGCCCGATGAACATGAACACTGCGTCCATAACAACCAGCCTGATGAACATGAACATCATACCCATTTTTCATGTGATGATCATCATGTCGAGGACGAACATTACTCTCTGAAGAATACACTAGAGTTTTGCTCGTTTCCGAGATGTGCATCAAATTCATGTGAGAAAATCCAGTGCACAAGCTCACCCGCCAGCCTTGATGGATCTGCAGGCAGTGATGAGCTCCATGAAAGTGGATGTTGTACTCATAATACCCAATCTGCTCAACATGATCATGAAATCCAAACTCTCAAATGTGATTTGGATGACAGCCACTCATCCAGTCCTGATCATCATAATGGTAATGGCTGTTGCTCTCAAAAGAACGCTCAGAAGGTTTCTTTATCTCATTCAATGTGTCATTCTGAGACCTGCAATTCAAGTCCTTGTGGGAAAACCAAATGTGTGGATTCAACTGAGAAGCAACACACGCCTGAAGGCAGTCTAGAACTCCTCCAAGACCATAACCATTGCCACCAAGGAAGCTGCGACACTTCCAATTTCGTCTCGGAATCCCAGGAAAACCACAGGAAAAATTGCAGTGAACCTTGTAAATCAAGACCAATAAGCAGGTGCACAGAAGATGAATGCACGGAAAGGGCTGAAATGACAGTTGATTGTGCTGAAGCAAACGAGCACCACAAGATGAAACAACATCATTGCCATTCTCATTCGAGTCTTGAAAATGAAGGAGTTCATCCTCATTGCAAGTCATCAAATGGAGATAACGACGGAGCAATCAACAAAACCACAAAAATCGAGCTCGAAGCAGCAGACCATTCGAACCCGAAACACGGCAACACTTGTAAGGCTCTGGAAAACAGAGAGACAAACAACAACTGTAAAACCTGCAGAAGAGGAAGCTCACAACTCAAAATTGGCAAAACTTGTGCAGGCTTGAAGAAGAACAGAGAAATACGTGGGTGTTGTAAGAGCTACATGAGGGAGTGCTGCAGGAAGCATGGTGATATCAGAATGGCAGTCCGAGGAGGCTTAAACGAAATCATCATAGAATAG 3177 45.39 MAAAAAAGNNGGALQKSYFDVLGICCSSEIPLIENILKEIEGIKEIKVIVATRTLIVLHDNLLVSQAQIVKALNQARLEANVRAYGDQQKNHRKKWPSPYAVASGLLLLVSFLKYVNPVFKWVALAAVAAGIWPIALKSFTAVRHLRIDINILALIAVIGTIVLNDYLEAATIVFLFTIAEWLESRAGHKANAVMSSLLSIAPQKAVLADTGEVVGADEVKMGTLLAVKAGEDIPIDGIVEEGKCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNSKSRTQRFIDKCAKFYTPAVIIISTGIAVIPFALRLHNRSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDCLETLGKIKIMAFDKTGTITRGEFMVTEFQALDKENISLDTLLYWVSSIESKSSHPMAAALVDHGRSLSINPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRANCATVPEIKDEAKDGRTVGYVFCGTTAAGIFTLSDSCRTGAKEAMAEIRSLELLPEDKTRLINDFKREGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMTNDIRKIPKAIRLARRANRKVIENVILSVAPRTAILGLAFGGHPLVWAAVLADVGACVLVILNSSVKPFEHEHCVHNNQPDEHEHCVHNNQPDEHEHCVHNNQPDEHEHCVHNNQPDEHEHHTHFSCDDHHVEDEHYSLKNTLEFCSFPRCASNSCEKIQCTSSPASLDGSAGSDELHESGCCTHNTQSAQHDHEIQTLKCDLDDSHSSSPDHHNGNGCCSQKNAQKVSLSHSMCHSETCNSSPCGKTKCVDSTEKQHTPEGSLELLQDHNHCHQGSCDTSNFVSESQENHRKNCSEPCKSRPISRCTEDECTERAEMTVDCAEANEHHKMKQHHCHSHSSLENEGVHPHCKSSNGDNDGAINKTTKIELEAADHSNPKHGNTCKALENRETNNNCKTCRRGSSQLKIGKTCAGLKKNREIRGCCKSYMRECCRKHGDIRMAVRGGLNEIIIE 1058
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6534383 6539588 + Cp4.1LG18g06320.1 Cpe18g00631 485092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00631 1058 SUPERFAMILY Calcium ATPase, transduction domain A 213 298 IPR008250 -
Cpe18g00631 1058 Gene3D - 410 532 IPR023299 GO:0000166
Cpe18g00631 1058 Pfam E1-E2 ATPase 209 377 - -
Cpe18g00631 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Cpe18g00631 1058 PRINTS H+-transporting ATPase (proton pump) signature 601 626 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe18g00631 1058 PRINTS H+-transporting ATPase (proton pump) signature 569 585 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe18g00631 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 548 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe18g00631 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 173 423 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe18g00631 1058 SUPERFAMILY HAD-like 399 669 IPR036412 -
Cpe18g00631 1058 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Cpe18g00631 1058 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 545 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cpe18g00631 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 13 546 - -
Cpe18g00631 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 547 671 - -
Cpe18g00631 1058 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 150 669 - -
Cpe18g00631 1058 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Cpe18g00631 1058 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Cpe18g00631 1058 PRINTS P-type cation-transporting ATPase superfamily signature 569 588 - -
Cpe18g00631 1058 PRINTS P-type cation-transporting ATPase superfamily signature 593 605 - -
Cpe18g00631 1058 SUPERFAMILY HMA, heavy metal-associated domain 13 85 IPR036163 GO:0046872
Cpe18g00631 1058 CDD P-type_ATPase_HM 101 669 - -
Cpe18g00631 1058 ProSitePatterns Hypothetical cof family signature 2. 569 591 - -
Cpe18g00631 1058 Gene3D - 547 636 IPR023214 -
Cpe18g00631 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 13 546 - -
Cpe18g00631 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 547 671 - -
Cpe18g00631 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 393 IPR023298 -
Cpe18g00631 1058 Pfam haloacid dehalogenase-like hydrolase 395 546 - -
Cpe18g00631 1058 Gene3D - 12 84 - -
Cpe18g00631 1058 Gene3D - 188 302 - -
Cpe18g00631 1058 Gene3D - 390 546 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00625 Cpe-Chr11:3984038 Cpe18g00631 Cpe-Chr18:6534383 1.38E-143 dispersed
Cpe18g00631 Cpe-Chr18:6534383 Cpe19g01198 Cpe-Chr19:8043954 4.69E-65 dispersed
Cpe05g01177 Cpe-Chr5:8092436 Cpe18g00631 Cpe-Chr18:6534383 1.16E-32 transposed
Cpe05g01196 Cpe-Chr5:8285892 Cpe18g00631 Cpe-Chr18:6534383 9.79E-54 transposed
Cpe11g00623 Cpe-Chr11:3953260 Cpe18g00631 Cpe-Chr18:6534383 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00631 K01534 - csv:101211188 1236.86