Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00665 ATGGCCTGCCCATCTCTGCCGTCGGCCACCATCACCTCCGTCATTCTCATTGTGATCTCATTGGAGCTGATTGTGTGTTGGGGCGCTCACACGGATGCAGAAGCGCTCCTCAAGTTCAAAAGCTCTCTTGAAATAAGCAATGATGCGTTGGTTGATTGGGGCTCGGAGTCCTCCCCTTGCTCCGAGAACAACAAGGCGAATTGGGTGGGTATTATTTGCCACAAGGGCCATGTTTGGGGATTGAAGCTCGAGAACATGGGGCTGAAGGGCAGCATTGACATGGAATCCCTCGAAGGGATCCCCTTTTTGAGGATTATTAGCCTTAAGAACAATAATTTTGAGGGCTCTTTGCCGGATGTCAAGAGAGTTGGGGCATTGAAATCTCTGTTTTTGTCTGGAAACCAATTCTCAGGCAGCATTCCTGGGGATTCGTTTTCCAACATGATGTCTTTGAAGAAGGTTCATTTGGCACACAACCAGTTTGAGGGTCCGATTCCTTGGTCCTTGGTCGAGTTGCCTCGCTTATTGGAGTTGAGGCTGGAAGGAAACAAGTTTTCTGCCCGAATTCCTAATTTCCAGCAGAAGGCATTCAAGTCCTTTAATATCTCCCATAACGATCAACTTCATGGCCCAATCCCACATGCCCTCTCCCACATGGATCCATCCTCCTTTTCAGGCATTGAAGGCTTATGTGGACCGCCACTTAATAAACCATGCAATACCGCAAATATGCCATCAGTCGCGAGCATCATCATGGTTTCAATAGCTCTCACACAAGCTTTGCTTGCCATCGGTGCAGGAATAGTAATCCTTAGCCGTCGGAACCAATCATCTTCTTGTGAAGAGGTTCCAGCCAACGGCAAATCTCCAGGTGCTAGAGCGTTAGATCCAGGGGTCGGGGCAAAGTCACCGGACCGTGCCTCCAGTCATGGATCGGGTAGACGGGTGGCCGAGGGTGCTAAGTTATCATTTGTAAGAGAGGACTTGGAGAAGTTTGATTTATCAGACTTGCTTAAAGCCTCTGCAGAGATCCTAGGAAGTGGGTGCTTCGGTTCTTCTTACAAGGCAGCCATGACCGGCGGACCTGTGGTGGTTGTGAAGAGGTTTAAGCAAATGAACAATGTGGATAAAGATGAATTCCAAGAACATATGAAGAGAATTGGAAGATTGAAACACCCCAACTTGCTTCCTCTCGTAGCCTACTTCTACAAAAAGGAAGAAAAGCTTCTCATAACAAACTTTGTTGAGAAGGGTAGCTTGGTTATTCAACTTCATGGGCAAAAAGCCGAGGGGCAACCAGCCCTCGATTGGTCTGCAAGGTTGAAGATCATCAAGGGCATTGCAAAGGGTCTTCGCTATCTCTACAGTGAGCTTCCAAGTCTCATAACCCCACATGGCCATCTCAAGTCCTCAAATGTGCTTCTCAATGCCAACTATGAGCCCCTTCTTTCGGACTATGGCCTGATCCCAGTTATCAACCAAGAGCACGCCCAAGATCTAATGGTGGCCTACAGATCCCCGGAGTACAACCAACAAGGTCGCATCACAAAGAAAACAGATGTGTGGAGCTTTGGGCTGTTGATCCTAGAGATTCTAACAGGGAAACTCGTAGCCAACTTTCTGCATCAGGGCAAGGGTGGGGACGAGGAAGATTTGGCAAGTTGGGTCAAATCCATTCCTGCGACAGAATGGAATAGCCAAGTATTTGATAAGAACATGGGGCCAACCAAGAGCAGCGAGGGTGAAATGATGAAGCTTCTGAGGATTGCATTAGCATGTTGCGAGAGCGACTTTGAAAAGAGGCTGGATTTGAGAGAGGTTGTGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGGGATGAAGATTTCTATTCTTCATACGCCAGTGAATCTGATGTTAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTTACCATGTGA 1944 47.38 MACPSLPSATITSVILIVISLELIVCWGAHTDAEALLKFKSSLEISNDALVDWGSESSPCSENNKANWVGIICHKGHVWGLKLENMGLKGSIDMESLEGIPFLRIISLKNNNFEGSLPDVKRVGALKSLFLSGNQFSGSIPGDSFSNMMSLKKVHLAHNQFEGPIPWSLVELPRLLELRLEGNKFSARIPNFQQKAFKSFNISHNDQLHGPIPHALSHMDPSSFSGIEGLCGPPLNKPCNTANMPSVASIIMVSIALTQALLAIGAGIVILSRRNQSSSCEEVPANGKSPGARALDPGVGAKSPDRASSHGSGRRVAEGAKLSFVREDLEKFDLSDLLKASAEILGSGCFGSSYKAAMTGGPVVVVKRFKQMNNVDKDEFQEHMKRIGRLKHPNLLPLVAYFYKKEEKLLITNFVEKGSLVIQLHGQKAEGQPALDWSARLKIIKGIAKGLRYLYSELPSLITPHGHLKSSNVLLNANYEPLLSDYGLIPVINQEHAQDLMVAYRSPEYNQQGRITKKTDVWSFGLLILEILTGKLVANFLHQGKGGDEEDLASWVKSIPATEWNSQVFDKNMGPTKSSEGEMMKLLRIALACCESDFEKRLDLREVVEKIEELKEKDGDEDFYSSYASESDVRSSRGLSDELNFTM 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6710715 6714731 + Cp4.1LG18g06630.1 Cpe18g00665 485126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00665 647 MobiDBLite consensus disorder prediction 628 647 - -
Cpe18g00665 647 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 625 - -
Cpe18g00665 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 625 - -
Cpe18g00665 647 MobiDBLite consensus disorder prediction 627 647 - -
Cpe18g00665 647 MobiDBLite consensus disorder prediction 280 314 - -
Cpe18g00665 647 SUPERFAMILY L domain-like 29 219 - -
Cpe18g00665 647 Gene3D Ribonuclease Inhibitor 126 240 IPR032675 -
Cpe18g00665 647 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Cpe18g00665 647 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Cpe18g00665 647 Gene3D Ribonuclease Inhibitor 27 124 IPR032675 -
Cpe18g00665 647 Gene3D Phosphorylase Kinase; domain 1 306 414 - -
Cpe18g00665 647 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Cpe18g00665 647 SUPERFAMILY Protein kinase-like (PK-like) 343 613 IPR011009 -
Cpe18g00665 647 ProSiteProfiles Protein kinase domain profile. 339 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00665 647 Gene3D Transferase(Phosphotransferase) domain 1 415 633 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01354 Cpe-Chr4:11044069 Cpe18g00665 Cpe-Chr18:6710715 0 dispersed
Cpe07g01079 Cpe-Chr7:9550744 Cpe18g00665 Cpe-Chr18:6710715 7.41E-150 dispersed
Cpe11g00540 Cpe-Chr11:3204724 Cpe18g00665 Cpe-Chr18:6710715 9.88E-142 dispersed
Cpe11g01200 Cpe-Chr11:9792792 Cpe18g00665 Cpe-Chr18:6710715 5.61E-140 dispersed
Cpe18g00665 Cpe-Chr18:6710715 Cpe01g01333 Cpe-Chr1:8022491 2.40E-111 dispersed
Cpe18g00665 Cpe-Chr18:6710715 Cpe02g01768 Cpe-Chr2:14373468 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62998 PF07714 PK_Tyr_Ser-Thr 8.50E-31 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00665 - - csv:101213261 996.497