Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00681 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCGTCGTCTTCTTCTTCTGATCCTACTTCTGATTCTAATCTCAGCTATCCTTATCATGATAAGCTCGATCATGTTGTTAATGGTGACCAATTGGTGACTAGCGATTTGCGCGCCCAATCGACTATTGGTCCCAAACGGAAACAAACCCAGCGTGGAGGAGAAGGGATTCTCGAGCAATTACCTGAGGAGGAGGACCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAGCGGACCAATCACTTCAGAGCTCCGCTTCCTCCTCCTCCTCCTCCTCCTCCTGCTTTAATGGACTCCCACAAGAAGGGTGGGTTGGAAACAGAGTTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAGGGAAGCTATGGGGTAGTCGGTTCGGCCATTGATACGCATACTGATGAGAAGGTCGCAATTAAGAAAATTAATGACGTTTTCGAGCATGTTTCTGATGCCACAAGAATTTTAAGAGAAATTAAACTCCTGCGGTTGCTCCGTCATCCTGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCTTCACCAAGTAATTAAGGCCAACGATGATCTCTCTCCTGAGCACCATCAGTTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATACATACAGCAAATGTGTTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCTGACTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCGTTTAATGATGCTCCATCTGCTATTTTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCTCATGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATGTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGGAAGCCACTGTTCCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGGTTGATGTGCTTGGCACGCCTTCTGCCGAGTCCATTGCCAAGATTCGAAATGAAAAGGCAAGAAGATACATTAGTAATATGAGGAGAAAGCAGCCTGTTTCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTTCGCTTGCTTAAACGTCTCCTTGCATTTGATCCCAAAGACCGTCCCACAGCTGAAGAGGCATTAGCTGATCCTTATTTTCATGGTTTGGCCAACGTGGATCGCGAACCATCAACACAACCAATTTCAAAACTCGAGTTCGAATTTGAGAGAAGAAAGTTGACAAAAGAGGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAAATGCTACAGGAATATCTCCGCAGTGGAGAACAAACTAGTTTCATGTACCCAAGCGGTGTCGATCGCTTCAAACGCCAGTTTGCACATCTAGAGGAACATTATGGAAAGGGCGAAAGAAGTACTCCACTTCAAAGAAAGCATGCTTCATTGCCCAGAGAAAGGGTTTGTGCACCAAAAGAAGAGGTCGAACAACACAATGATTTAGAAGGAAGAAATGGTGCACATGTTGCTACATCTCTTCAGAGTCCCCCAAGGTCGACAGGGGATACTTCGGAACATGCAAACGGTTACGAACAAAATGGACCAAACAAGGCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGTTGTTAAACCAAGAAACGACCTAGAGGAGGAACCGATTATGGAGATGAACGACGAGGCAGTTGATGGATTGTCTCAAAAGGTTTCAGCATTGCATGCTTGA 1899 43.81 MGSGTLVDGVRRWFQRRTSSSSSSDPTSDSNLSYPYHDKLDHVVNGDQLVTSDLRAQSTIGPKRKQTQRGGEGILEQLPEEEDLDYSALKLIKVPKRTNHFRAPLPPPPPPPPALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLSPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAHELCGSFFSKYTPAIDMWSIGCIFAEMLTGKPLFPGKNVVHQLDLMVDVLGTPSAESIAKIRNEKARRYISNMRRKQPVSLTQKFPNADPLALRLLKRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKEDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRKHASLPRERVCAPKEEVEQHNDLEGRNGAHVATSLQSPPRSTGDTSEHANGYEQNGPNKANYSARSLLKSASISASKCIVVKPRNDLEEEPIMEMNDEAVDGLSQKVSALHA 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6822933 6828027 + Cp4.1LG18g06800.1 Cpe18g00681 485142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00681 632 MobiDBLite consensus disorder prediction 550 580 - -
Cpe18g00681 632 Gene3D Phosphorylase Kinase; domain 1 154 475 - -
Cpe18g00681 632 MobiDBLite consensus disorder prediction 608 632 - -
Cpe18g00681 632 Gene3D Transferase(Phosphotransferase) domain 1 224 452 - -
Cpe18g00681 632 ProSitePatterns MAP kinase signature. 173 276 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe18g00681 632 CDD STKc_TDY_MAPK 137 474 - -
Cpe18g00681 632 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 558 - -
Cpe18g00681 632 MobiDBLite consensus disorder prediction 53 79 - -
Cpe18g00681 632 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524
Cpe18g00681 632 Pfam Protein kinase domain 138 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00681 632 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 97 558 - -
Cpe18g00681 632 SMART serkin_6 138 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00681 632 MobiDBLite consensus disorder prediction 508 545 - -
Cpe18g00681 632 ProSiteProfiles Protein kinase domain profile. 138 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00681 632 MobiDBLite consensus disorder prediction 508 580 - -
Cpe18g00681 632 MobiDBLite consensus disorder prediction 14 34 - -
Cpe18g00681 632 SUPERFAMILY Protein kinase-like (PK-like) 134 434 IPR011009 -
Cpe18g00681 632 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00119 Cpe-Chr17:737050 Cpe18g00681 Cpe-Chr18:6822933 0 dispersed
Cpe18g00681 Cpe-Chr18:6822933 Cpe20g00144 Cpe-Chr20:812233 0 wgd
Cpe18g00681 Cpe-Chr18:6822933 Cpe04g01376 Cpe-Chr4:11169248 0 wgd
Cpe18g00681 Cpe-Chr18:6822933 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63000 PF00069 Pkinase 2.50E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00681 - - cpep:111793155 1077.0