Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00682 ATGACTGGCGGCGATCAAGACCACGAGCCTGAAAAATGTGGCAACGCCACCAATCACCAACAAAGACCTGCCTCCTTTGATCCCTCTTCTCTTGTCTCTCCCAAGGCTGTGCCGCCCATCTCGGCGGCCCCGGACACCGATCATGCTCTCCGCCGCCCGCGGGGCCGCCCTGCCGGGTCCAAAAATAAGCCTAAACCCCCAATTATTGTTACTCGAGATAGCGCCAATGCGCTTCGAGCTCATGCGATTGAGGTTAGTTCTGGGTGCGATGTCAATGAGAGCCTCTCGAACTTTGCTCGAAGGAAGCAGCGTGGCTTCTGCATTCTTAGTGGGACGCCGTCGGGGATCACTGGACTGACGATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGTGGAGTTGTGGTGGGTGCGCTCATTGCTTCCGGCCCAGTCGTGATCATGGCGGCGACGTTCATGAACGCAACATTCGACCGCCTGCCGTCGGACGACGAAGAAGTGGCAAGCGCTATACAGAGCCAACACTACGGCCAACATGGACGGAGCCACCACCACGTGGATGTGTCGGATCTGTATGGCGTGCCGCAGAATTTGATCACCAACAGCGCACTTCCGCCGGAATTGTACTCTTGGGCAGCGGCGGGCAGAACCATGTCAAAGACTTGA 666 57.96 MTGGDQDHEPEKCGNATNHQQRPASFDPSSLVSPKAVPPISAAPDTDHALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGFCILSGTPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVASAIQSQHYGQHGRSHHHVDVSDLYGVPQNLITNSALPPELYSWAAAGRTMSKT 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6828702 6829561 + Cp4.1LG18g06860.1 Cpe18g00682 485143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00682 221 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 112 220 - -
Cpe18g00682 221 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 112 IPR014476 GO:0003680
Cpe18g00682 221 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 112 220 IPR014476 GO:0003680
Cpe18g00682 221 MobiDBLite consensus disorder prediction 1 68 - -
Cpe18g00682 221 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 153 IPR005175 -
Cpe18g00682 221 MobiDBLite consensus disorder prediction 1 15 - -
Cpe18g00682 221 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 29 112 - -
Cpe18g00682 221 Gene3D - 108 185 - -
Cpe18g00682 221 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00682 Cpe-Chr18:6828702 Cpe01g01079 Cpe-Chr1:6366461 8.24E-42 dispersed
Cpe18g00682 Cpe-Chr18:6828702 Cpe04g01378 Cpe-Chr4:11179503 1.05E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00682 - - cpep:111779804 408.683