Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00682 | ATGACTGGCGGCGATCAAGACCACGAGCCTGAAAAATGTGGCAACGCCACCAATCACCAACAAAGACCTGCCTCCTTTGATCCCTCTTCTCTTGTCTCTCCCAAGGCTGTGCCGCCCATCTCGGCGGCCCCGGACACCGATCATGCTCTCCGCCGCCCGCGGGGCCGCCCTGCCGGGTCCAAAAATAAGCCTAAACCCCCAATTATTGTTACTCGAGATAGCGCCAATGCGCTTCGAGCTCATGCGATTGAGGTTAGTTCTGGGTGCGATGTCAATGAGAGCCTCTCGAACTTTGCTCGAAGGAAGCAGCGTGGCTTCTGCATTCTTAGTGGGACGCCGTCGGGGATCACTGGACTGACGATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGTGGAGTTGTGGTGGGTGCGCTCATTGCTTCCGGCCCAGTCGTGATCATGGCGGCGACGTTCATGAACGCAACATTCGACCGCCTGCCGTCGGACGACGAAGAAGTGGCAAGCGCTATACAGAGCCAACACTACGGCCAACATGGACGGAGCCACCACCACGTGGATGTGTCGGATCTGTATGGCGTGCCGCAGAATTTGATCACCAACAGCGCACTTCCGCCGGAATTGTACTCTTGGGCAGCGGCGGGCAGAACCATGTCAAAGACTTGA | 666 | 57.96 | MTGGDQDHEPEKCGNATNHQQRPASFDPSSLVSPKAVPPISAAPDTDHALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGFCILSGTPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVASAIQSQHYGQHGRSHHHVDVSDLYGVPQNLITNSALPPELYSWAAAGRTMSKT | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6828702 | 6829561 | + | Cp4.1LG18g06860.1 | Cpe18g00682 | 485143 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00682 | 221 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 | 112 | 220 | - | - | |
Cpe18g00682 | 221 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 29 | 112 | IPR014476 | GO:0003680 | |
Cpe18g00682 | 221 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 112 | 220 | IPR014476 | GO:0003680 | |
Cpe18g00682 | 221 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Cpe18g00682 | 221 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 118 | 153 | IPR005175 | - | |
Cpe18g00682 | 221 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cpe18g00682 | 221 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 | 29 | 112 | - | - | |
Cpe18g00682 | 221 | Gene3D | - | 108 | 185 | - | - | |
Cpe18g00682 | 221 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 75 | 168 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00682 | Cpe-Chr18:6828702 | Cpe01g01079 | Cpe-Chr1:6366461 | 8.24E-42 | dispersed | |
Cpe18g00682 | Cpe-Chr18:6828702 | Cpe04g01378 | Cpe-Chr4:11179503 | 1.05E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00682 | - | - | cpep:111779804 | 408.683 |