Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00688 | ATGGATGCTTCTCCGCCATCTTCAAGCGCCAAACCCTCGAATTTCGCAACCCCAAGGAGACGAAGAATCTGTGTCGATTCAAAGAGGGGAAGACATGCTTCCTTCTGCGCTTGTCGAGTCGCTTCCCATTTCGCCTCTTCCCTTTTGAAGTTGTGGGAATTTCGAGTTTTCGCGCCTTATCGTGGACTTGCGCGTTTCTCCATCTCGTTTCCTTCTAGGGATTTCTGGAAAAGGTATAAGAGGAAGATTTTAATTACAGCTGGAGTTTTAGGAAGCGGGTATTTTCTGTACCGACAATATGATTATTACAGTCGAAGGCTTTATGATATCCAGAAAGAGTTGGATAATGAACGTGAAGCAGATGAGCTCATTAAAGCTCAAATACAAGCTCATTTTGAGAACATTCAAAGAATAGCTGATACGACGACGTTGCCTCATGCTTTACAACATTTACATAATCGGATAGAGGAAGATTTGGATCTTTCACACCTGACAGAGAGATTAATGATGGGGAAGGGCGAGCCAAACACTTTGACATTAGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTGTTAAGTTTGTACATTAGAGTTCAAGTCAACATCTTAGGAAGACATATGTACATCGATACTGCCCGTGGTCTTGGTAGCTCCCAGTTGCTTGAGGAGGCTGATCTCATCAATAGAGAAGACCAACAGAAATTTCTGGCCATCTCTGATTTTCTATGTAATTATGGTCTGAATGCCTTGATTCCTAAATTGCAGGTAGCAGTAGGAGAAGTTCTTAAGAGAAGACAGTTGCGAGATGTCTTTAATACAACCGTACTTCGTGACACTACTACACAAATAATTAAAATTTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGGGGACAATCAATCTAATATTACAGACACGCTCTCCACTGACGACGATGCAGCTGCCCGAAATTTCAACAAGTTTGATCAGCTCATGATGGAGACTAGAGCAGTACTGCTAAGTGCCGAGTTCGGGAGTGTCGTCGAGAGATCGTTAGAAGTGGGAGTCGATGGATTGATGGATGAAATGGAGGCTTCAGTTGCTGGAGGCAGCAGCAGAACATCAGGAATACCCCTGGCTAGGCTTGTGCCAAGAGTGGCCCAGATGGGGCTATTGCTCCTTGAAGATCCAATAAAAAGTAGATTCATCAAAACGATAAGAGCAATGGCTGAGCTCGATCCATCAAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGGGAGGGTACCTATGGTGTTGTACATAAGGCTATTGATACTCAGACAGGTCAGACGGTTGCTATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTCAAAGATCCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGAAATTTGCATCTTGTATTTGAGTTTATGGAGACAGACCTTGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATAAAATCATTCCTTCAGATGACGTTGAAAGGACTTGCTTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTAAAACTTGCAGATTTTGGTTTGGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCACCTGAGCTATTGTTTGGCACTAAGCAATATGGCTCTGCAGTTGATGGTTCAAGTGACATTGACCAATTGGGGAAGATCTTTGCAGCTTTTGGAACACCAACGCCTTCTCAATGGCCTGATATGTTATACCTACCTGATTACGTGGAGTTCCAATATGTTCCTGCCCCTCCCCTACGATCATTGTTTCCTATGGCTAGTGATGACACGCTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGATACTTCTCATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCAAGAACCTACGAACTCTCGAGGTTTGGACTTAAATTCAAATGAGGCTCCGGCTGTCCTCTCTTCTCCAAGAAAGTTGAGAAGAGTAATGCCAGATCGTGAGGCTTTTGAAGGAAATGCATATAAATCTGATAGGCTTGATGACCATGTTAGTGAGCGAGAGGCAGCTGCTGGAAATACAAGCAAGAATGAAGCAGTGCCTATGTCGTTGGATTTTTCTGTTTTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAACAATAA | 2460 | 42.36 | MDASPPSSSAKPSNFATPRRRRICVDSKRGRHASFCACRVASHFASSLLKLWEFRVFAPYRGLARFSISFPSRDFWKRYKRKILITAGVLGSGYFLYRQYDYYSRRLYDIQKELDNEREADELIKAQIQAHFENIQRIADTTTLPHALQHLHNRIEEDLDLSHLTERLMMGKGEPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYIDTARGLGSSQLLEEADLINREDQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRRQLRDVFNTTVLRDTTTQIIKIFMSTGSPHHWLDYLMPGDNQSNITDTLSTDDDAAARNFNKFDQLMMETRAVLLSAEFGSVVERSLEVGVDGLMDEMEASVAGGSSRTSGIPLARLVPRVAQMGLLLLEDPIKSRFIKTIRAMAELDPSKKVADRYLKREVLGEGTYGVVHKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSFLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLPTDPSKLPRPTSKQEPTNSRGLDLNSNEAPAVLSSPRKLRRVMPDREAFEGNAYKSDRLDDHVSEREAAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ | 819 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6860425 | 6870020 | + | Cp4.1LG18g06830.1 | Cpe18g00688 | 485149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00688 | 819 | MobiDBLite | consensus disorder prediction | 710 | 735 | - | - | |
Cpe18g00688 | 819 | Gene3D | Transferase(Phosphotransferase) domain 1 | 618 | 714 | - | - | |
Cpe18g00688 | 819 | Gene3D | Transferase(Phosphotransferase) domain 1 | 518 | 617 | - | - | |
Cpe18g00688 | 819 | SMART | serkin_6 | 437 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00688 | 819 | CDD | STKc_CDK7 | 436 | 711 | IPR037770 | GO:0005675|GO:0008353|GO:0070985 | |
Cpe18g00688 | 819 | SUPERFAMILY | Protein kinase-like (PK-like) | 433 | 705 | IPR011009 | - | |
Cpe18g00688 | 819 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 555 | 567 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe18g00688 | 819 | PANTHER | CYCLIN-DEPENDENT KINASE D-2 | 432 | 764 | - | - | |
Cpe18g00688 | 819 | Pfam | Protein kinase domain | 439 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00688 | 819 | Gene3D | Phosphorylase Kinase; domain 1 | 427 | 517 | - | - | |
Cpe18g00688 | 819 | MobiDBLite | consensus disorder prediction | 742 | 771 | - | - | |
Cpe18g00688 | 819 | ProSiteProfiles | Protein kinase domain profile. | 437 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00688 | 819 | PANTHER | CELL DIVISION PROTEIN KINASE | 432 | 764 | - | - | |
Cpe18g00688 | 819 | Pfam | Peroxin-3 | 178 | 388 | IPR006966 | GO:0005779|GO:0007031 | |
Cpe18g00688 | 819 | Pfam | Peroxin-3 | 75 | 173 | IPR006966 | GO:0005779|GO:0007031 | |
Cpe18g00688 | 819 | ProSitePatterns | Protein kinases ATP-binding region signature. | 443 | 467 | IPR017441 | GO:0005524 | |
Cpe18g00688 | 819 | MobiDBLite | consensus disorder prediction | 804 | 819 | - | - | |
Cpe18g00688 | 819 | MobiDBLite | consensus disorder prediction | 700 | 819 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00688 | Cpe-Chr18:6860425 | Cpe01g01276 | Cpe-Chr1:7675157 | 4.08E-73 | dispersed | |
Cpe04g01385 | Cpe-Chr4:11207918 | Cpe18g00688 | Cpe-Chr18:6860425 | 0 | transposed | |
Cpe18g00688 | Cpe-Chr18:6860425 | Cpe04g01382 | Cpe-Chr4:11197653 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63001 | PF00069 | Pkinase | 2.20E-58 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00688 | K02202 | - | csv:101217645 | 747.273 |