Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00688 ATGGATGCTTCTCCGCCATCTTCAAGCGCCAAACCCTCGAATTTCGCAACCCCAAGGAGACGAAGAATCTGTGTCGATTCAAAGAGGGGAAGACATGCTTCCTTCTGCGCTTGTCGAGTCGCTTCCCATTTCGCCTCTTCCCTTTTGAAGTTGTGGGAATTTCGAGTTTTCGCGCCTTATCGTGGACTTGCGCGTTTCTCCATCTCGTTTCCTTCTAGGGATTTCTGGAAAAGGTATAAGAGGAAGATTTTAATTACAGCTGGAGTTTTAGGAAGCGGGTATTTTCTGTACCGACAATATGATTATTACAGTCGAAGGCTTTATGATATCCAGAAAGAGTTGGATAATGAACGTGAAGCAGATGAGCTCATTAAAGCTCAAATACAAGCTCATTTTGAGAACATTCAAAGAATAGCTGATACGACGACGTTGCCTCATGCTTTACAACATTTACATAATCGGATAGAGGAAGATTTGGATCTTTCACACCTGACAGAGAGATTAATGATGGGGAAGGGCGAGCCAAACACTTTGACATTAGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTGTTAAGTTTGTACATTAGAGTTCAAGTCAACATCTTAGGAAGACATATGTACATCGATACTGCCCGTGGTCTTGGTAGCTCCCAGTTGCTTGAGGAGGCTGATCTCATCAATAGAGAAGACCAACAGAAATTTCTGGCCATCTCTGATTTTCTATGTAATTATGGTCTGAATGCCTTGATTCCTAAATTGCAGGTAGCAGTAGGAGAAGTTCTTAAGAGAAGACAGTTGCGAGATGTCTTTAATACAACCGTACTTCGTGACACTACTACACAAATAATTAAAATTTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGGGGACAATCAATCTAATATTACAGACACGCTCTCCACTGACGACGATGCAGCTGCCCGAAATTTCAACAAGTTTGATCAGCTCATGATGGAGACTAGAGCAGTACTGCTAAGTGCCGAGTTCGGGAGTGTCGTCGAGAGATCGTTAGAAGTGGGAGTCGATGGATTGATGGATGAAATGGAGGCTTCAGTTGCTGGAGGCAGCAGCAGAACATCAGGAATACCCCTGGCTAGGCTTGTGCCAAGAGTGGCCCAGATGGGGCTATTGCTCCTTGAAGATCCAATAAAAAGTAGATTCATCAAAACGATAAGAGCAATGGCTGAGCTCGATCCATCAAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGGGAGGGTACCTATGGTGTTGTACATAAGGCTATTGATACTCAGACAGGTCAGACGGTTGCTATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTCAAAGATCCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGAAATTTGCATCTTGTATTTGAGTTTATGGAGACAGACCTTGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATAAAATCATTCCTTCAGATGACGTTGAAAGGACTTGCTTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTAAAACTTGCAGATTTTGGTTTGGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCACCTGAGCTATTGTTTGGCACTAAGCAATATGGCTCTGCAGTTGATGGTTCAAGTGACATTGACCAATTGGGGAAGATCTTTGCAGCTTTTGGAACACCAACGCCTTCTCAATGGCCTGATATGTTATACCTACCTGATTACGTGGAGTTCCAATATGTTCCTGCCCCTCCCCTACGATCATTGTTTCCTATGGCTAGTGATGACACGCTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGATACTTCTCATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCAAGAACCTACGAACTCTCGAGGTTTGGACTTAAATTCAAATGAGGCTCCGGCTGTCCTCTCTTCTCCAAGAAAGTTGAGAAGAGTAATGCCAGATCGTGAGGCTTTTGAAGGAAATGCATATAAATCTGATAGGCTTGATGACCATGTTAGTGAGCGAGAGGCAGCTGCTGGAAATACAAGCAAGAATGAAGCAGTGCCTATGTCGTTGGATTTTTCTGTTTTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAACAATAA 2460 42.36 MDASPPSSSAKPSNFATPRRRRICVDSKRGRHASFCACRVASHFASSLLKLWEFRVFAPYRGLARFSISFPSRDFWKRYKRKILITAGVLGSGYFLYRQYDYYSRRLYDIQKELDNEREADELIKAQIQAHFENIQRIADTTTLPHALQHLHNRIEEDLDLSHLTERLMMGKGEPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYIDTARGLGSSQLLEEADLINREDQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRRQLRDVFNTTVLRDTTTQIIKIFMSTGSPHHWLDYLMPGDNQSNITDTLSTDDDAAARNFNKFDQLMMETRAVLLSAEFGSVVERSLEVGVDGLMDEMEASVAGGSSRTSGIPLARLVPRVAQMGLLLLEDPIKSRFIKTIRAMAELDPSKKVADRYLKREVLGEGTYGVVHKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSFLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLPTDPSKLPRPTSKQEPTNSRGLDLNSNEAPAVLSSPRKLRRVMPDREAFEGNAYKSDRLDDHVSEREAAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6860425 6870020 + Cp4.1LG18g06830.1 Cpe18g00688 485149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00688 819 MobiDBLite consensus disorder prediction 710 735 - -
Cpe18g00688 819 Gene3D Transferase(Phosphotransferase) domain 1 618 714 - -
Cpe18g00688 819 Gene3D Transferase(Phosphotransferase) domain 1 518 617 - -
Cpe18g00688 819 SMART serkin_6 437 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00688 819 CDD STKc_CDK7 436 711 IPR037770 GO:0005675|GO:0008353|GO:0070985
Cpe18g00688 819 SUPERFAMILY Protein kinase-like (PK-like) 433 705 IPR011009 -
Cpe18g00688 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Cpe18g00688 819 PANTHER CYCLIN-DEPENDENT KINASE D-2 432 764 - -
Cpe18g00688 819 Pfam Protein kinase domain 439 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00688 819 Gene3D Phosphorylase Kinase; domain 1 427 517 - -
Cpe18g00688 819 MobiDBLite consensus disorder prediction 742 771 - -
Cpe18g00688 819 ProSiteProfiles Protein kinase domain profile. 437 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00688 819 PANTHER CELL DIVISION PROTEIN KINASE 432 764 - -
Cpe18g00688 819 Pfam Peroxin-3 178 388 IPR006966 GO:0005779|GO:0007031
Cpe18g00688 819 Pfam Peroxin-3 75 173 IPR006966 GO:0005779|GO:0007031
Cpe18g00688 819 ProSitePatterns Protein kinases ATP-binding region signature. 443 467 IPR017441 GO:0005524
Cpe18g00688 819 MobiDBLite consensus disorder prediction 804 819 - -
Cpe18g00688 819 MobiDBLite consensus disorder prediction 700 819 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00688 Cpe-Chr18:6860425 Cpe01g01276 Cpe-Chr1:7675157 4.08E-73 dispersed
Cpe04g01385 Cpe-Chr4:11207918 Cpe18g00688 Cpe-Chr18:6860425 0 transposed
Cpe18g00688 Cpe-Chr18:6860425 Cpe04g01382 Cpe-Chr4:11197653 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63001 PF00069 Pkinase 2.20E-58 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00688 K02202 - csv:101217645 747.273