Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00696 ATGATCGACGACATCAAAAAGAAGATTATCATTGGCACATGCACTGGTTTTGGAGCCTTGCTTTTAACCTTACTTGTTCTTGGCGTCTGCTACCGATGGCGCCAGCTCCGTCGTAAAAGGTCTCACATGCTGCCATACGTGCAACGGAGCGTTCTCTCGAATCCACCGTCCGTGGAAGAAGCTGAGAATGGAGGCTTACTCAAAGACGGGCGTGCCGTTGCTGTCAAACGGTTGTTCGAAAGCAATTTCAAGAGAGTTGAGCAGTTCATGAATGAGGTCGGGATCCTCGCACGTTTACGCCACCACAACCTCGTTTCACTTTACGGTTGTACCTCGAGCAACAGCCGCGAGCTTCTGCTCGTGTATGAATACGTTCCGAACGGTACGGTGGCTGATCACCTCCATGGAAAACTAGAAAAGCCAGGCAAGCTTCCATGGTCTACAAGAATGAAGATTGCTATAGAAACTGCAAGTGCTTTAGTGTATCTCCATGCTTCTGAAATCATCCACCGCGATGTCAAAACCAACAACATCCTCCTCGACAACCACTACTCCGTTAAAGTAGCCGATTTCGGGTTATCCCGCCTCTTCCCACTCGACGTCACGCACGTGTCAACCGCTCCACAAGGCACTCCCGGCTATGTCGACCCGGAGTACCATCAGTGCTACCAACTCTCTGATAAAAGCGATGTCTTCAGCTTCGGCGTCGTACTTGTTGAACTCATGTCCTCAATGCCTGCTGTTGACATCACAAGACATAGACAAGAGATCAACCTGTTCAACATGGCCATCAACAAGATCCAAAGCCACGCATTACACGAGCTCGTCGACCCATCACTCGGTTTCGAATCAGACTACAAAATCAAAGACATGATAACGAGCGTCGCAGAGGTCGCATTTCGATGCCTGCAGAGCATGAAAGACGAGAGGCCAACAATGATGGAAGTTCTCGACAGTCTAAACGCCATACAGAATCGAAACAGCGATGCTGTGCAGGTAAAGAATGGCTATGAATCTTCTCAAAGTTCCATGTCAGTATCTTGGGTTAGTAGTAACACCTCTACAGCAACAAATTATTGA 1080 48.43 MIDDIKKKIIIGTCTGFGALLLTLLVLGVCYRWRQLRRKRSHMLPYVQRSVLSNPPSVEEAENGGLLKDGRAVAVKRLFESNFKRVEQFMNEVGILARLRHHNLVSLYGCTSSNSRELLLVYEYVPNGTVADHLHGKLEKPGKLPWSTRMKIAIETASALVYLHASEIIHRDVKTNNILLDNHYSVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLSDKSDVFSFGVVLVELMSSMPAVDITRHRQEINLFNMAINKIQSHALHELVDPSLGFESDYKIKDMITSVAEVAFRCLQSMKDERPTMMEVLDSLNAIQNRNSDAVQVKNGYESSQSSMSVSWVSSNTSTATNY 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6922562 6925544 + Cp4.1LG18g06950.1 Cpe18g00696 485157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00696 359 ProSiteProfiles Protein kinase domain profile. 33 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00696 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Cpe18g00696 359 SUPERFAMILY Protein kinase-like (PK-like) 67 320 IPR011009 -
Cpe18g00696 359 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 65 338 - -
Cpe18g00696 359 Gene3D Transferase(Phosphotransferase) domain 1 126 346 - -
Cpe18g00696 359 SMART serkin_6 57 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00696 359 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 65 338 IPR044652 -
Cpe18g00696 359 Pfam Protein kinase domain 68 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00696 359 Gene3D Phosphorylase Kinase; domain 1 64 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g01140 Cpe-Chr13:9070975 Cpe18g00696 Cpe-Chr18:6922562 9.41E-123 dispersed
Cpe18g00696 Cpe-Chr18:6922562 Cpe13g01098 Cpe-Chr13:8857398 1.83E-66 dispersed
Cpe18g00696 Cpe-Chr18:6922562 Cpe02g01414 Cpe-Chr2:12308346 1.16E-35 wgd
Cpe18g00696 Cpe-Chr18:6922562 Cpe20g00131 Cpe-Chr20:727800 6.64E-13 wgd
Cpe18g00696 Cpe-Chr18:6922562 Cpe04g01393 Cpe-Chr4:11263862 9.84E-13 wgd
Cpe18g00696 Cpe-Chr18:6922562 Cpe09g00318 Cpe-Chr9:1891216 4.15E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63002 PF00069 Pkinase 3.60E-43 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00696 - - csv:101210087 555.444