Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00703 | ATGGCGTCCGGCAAGCGATGCCATTACGAGGTCCTCGGCCTCCACATCGACTGCACCGCCGACGAGATTCGATCGGCGTACCGGAAGCTAGCCCTCCAACGCCACCCCGATAAGCTCGTCCAGTCCGGTTTGTCACAATCTGATGCCACCGCTCAGTTTCAAGAGCTTCAGCACGCGTACGAGGTCCTCTCCGATCCTAAAGAACGCGCCTGGTACGACTCTCATCGTTCCCAAATCCTCTTTTCTGATGCCGGATCGGTTAATTCCAACTCTGTTGTTCCGAATCTATTTCCATTCTTCTCCAATACCGTTTATTCTGGCTATTCGGATTCTGGACGAGGGTTCTATAAGATTTATTCCGACATTTTTGACAAAATTTACGGGAATGAGATTAACTTCGCAAAGAAATTAGGATTGCGCTTGGATACGATTCGCAATGCTCCGGTGATGGGGAATTTGGATGCTCCGTACACGCAGGTGACTGCGTTTTATAATTACTGGCTTGGATTTTGCACGGTTATGGATTTTTGCTGGGTTGATCAGTACGATGTCATGGCCGGTCCAAACCGGAAATCGAGGAGGCTAATGGAGGAGGATAACAAGAAGCTGAGGAAGAAGGCAAAGAGGGAGTACAATGAGACAGTAAGAGGTTTGGCCGAGTTTGTGAAGAAGAGGGATAAGAGAGTGACTGATATGGCTATGAAAAGGAACATAGAAATGGAGAAGAAGAAGGAAGAGGAGAGGGAAAGGAAAAAGAAGCTAGAGAGGGAGAAGATGGAGAAGCTTAAGGCATTCGAGGAACCGGATTGGGCCAAAGTTGAGGAAATTGAGGAGGATCCGGAAGATGAATCTGAGGAAGAGAAGAGAGCGAAAGAGCTGTACTGTGTTTTGTGTGGGAAAAAGTTCAAGAGTGAAAAGCAGTGGAAGAATCACGAACAGTCAAAAAAACACAAGGAGAAGGTCGCAGAGTTCAAGGAATCCCTTGACGACGAGGAAGAATCTGAAGAATTTGTTGATGAAGAACAAGATGAAGAAGAAGCCACACTGCTGGATGTTGGGATAGATAAACTAGAGGAGCAGTTCAAGGAAAGTTTTGATATTGAAGCAGAAGAAGCTGAACTTAGTGGGAGTGAATATTATGATGTTCATGAAGTTGATCGATCAGATATCGTTGCTGAGGAACTTGGATCCAATGACGACGACGACGAAACAGATATTCTTGAAGCAATGGCAGCTGGGCTGAGGAATAGGAAAAATGCAGCTTCATTGGATCAGCCTAAAGCTTCCTCAGACAAAGCTCATTTTGAAAGTGAGAACGATGAGCCTAATCCAGCGGAGTTCGAAAATGTTAGGAGGGGAGGAAAGAATCGTCGAGCCAAAAAGAAGGGCAAGGGAAATGATGAAGCTAGGAACGAAACTGAACCCGATTCTCAAAATGACAAAAACAACGGAGACGATACATCATATCAGCAGGATTCCCCTTCCAATTCGTTGGCTAAAGAACAAAGGAATTCAACTCAACCAGCTGATCGGAAAGCAGTCGCACAGAAGGACACAAAGACCAACACTAGGCACGCATCTAAAGGGAAGAAATCCAAGGCAACAGCCAAGGATTCTGGCAATTCATGCGAAACATGTGGGGAGCAGTTTGAATCAAGGAATAAACTGCATAAGCATTTGGGAGCCACAGGGCATGCTGCATTAAAATATCGATGA | 1716 | 45.75 | MASGKRCHYEVLGLHIDCTADEIRSAYRKLALQRHPDKLVQSGLSQSDATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDAGSVNSNSVVPNLFPFFSNTVYSGYSDSGRGFYKIYSDIFDKIYGNEINFAKKLGLRLDTIRNAPVMGNLDAPYTQVTAFYNYWLGFCTVMDFCWVDQYDVMAGPNRKSRRLMEEDNKKLRKKAKREYNETVRGLAEFVKKRDKRVTDMAMKRNIEMEKKKEEERERKKKLEREKMEKLKAFEEPDWAKVEEIEEDPEDESEEEKRAKELYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKESLDDEEESEEFVDEEQDEEEATLLDVGIDKLEEQFKESFDIEAEEAELSGSEYYDVHEVDRSDIVAEELGSNDDDDETDILEAMAAGLRNRKNAASLDQPKASSDKAHFESENDEPNPAEFENVRRGGKNRRAKKKGKGNDEARNETEPDSQNDKNNGDDTSYQQDSPSNSLAKEQRNSTQPADRKAVAQKDTKTNTRHASKGKKSKATAKDSGNSCETCGEQFESRNKLHKHLGATGHAALKYR | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6961937 | 6965540 | - | Cp4.1LG18g07020.1 | Cpe18g00703 | 485164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00703 | 571 | Pfam | Zinc-finger double-stranded RNA-binding | 293 | 318 | IPR022755 | - | |
Cpe18g00703 | 571 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 541 | 570 | IPR013087 | - | |
Cpe18g00703 | 571 | PANTHER | DNAJ PROTEIN JJJ1 HOMOLOG | 1 | 571 | IPR044648 | - | |
Cpe18g00703 | 571 | SMART | c2h2final6 | 293 | 317 | IPR013087 | - | |
Cpe18g00703 | 571 | SMART | c2h2final6 | 541 | 565 | IPR013087 | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 328 | 346 | - | - | |
Cpe18g00703 | 571 | ProSitePatterns | Nt-dnaJ domain signature. | 53 | 72 | IPR018253 | - | |
Cpe18g00703 | 571 | Coils | Coil | 314 | 334 | - | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 305 | 327 | - | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 429 | 453 | - | - | |
Cpe18g00703 | 571 | Pfam | DnaJ domain | 8 | 73 | IPR001623 | - | |
Cpe18g00703 | 571 | PRINTS | DnaJ domain signature | 9 | 27 | IPR001623 | - | |
Cpe18g00703 | 571 | PRINTS | DnaJ domain signature | 27 | 42 | IPR001623 | - | |
Cpe18g00703 | 571 | PRINTS | DnaJ domain signature | 48 | 68 | IPR001623 | - | |
Cpe18g00703 | 571 | CDD | DnaJ | 7 | 65 | IPR001623 | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 482 | 512 | - | - | |
Cpe18g00703 | 571 | Coils | Coil | 193 | 213 | - | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 305 | 346 | - | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 416 | 549 | - | - | |
Cpe18g00703 | 571 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 543 | 565 | IPR013087 | - | |
Cpe18g00703 | 571 | ProSiteProfiles | dnaJ domain profile. | 7 | 76 | IPR001623 | - | |
Cpe18g00703 | 571 | MobiDBLite | consensus disorder prediction | 461 | 481 | - | - | |
Cpe18g00703 | 571 | Gene3D | DnaJ domain | 1 | 90 | IPR036869 | - | |
Cpe18g00703 | 571 | Gene3D | Classic Zinc Finger | 272 | 340 | - | - | |
Cpe18g00703 | 571 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 295 | 317 | IPR013087 | - | |
Cpe18g00703 | 571 | SUPERFAMILY | Chaperone J-domain | 4 | 97 | IPR036869 | - | |
Cpe18g00703 | 571 | SUPERFAMILY | beta-beta-alpha zinc fingers | 282 | 338 | IPR036236 | - | |
Cpe18g00703 | 571 | SMART | dnaj_3 | 6 | 68 | IPR001623 | - | |
Cpe18g00703 | 571 | SMART | ZnF_U1_5 | 290 | 324 | IPR003604 | GO:0003676|GO:0008270 | |
Cpe18g00703 | 571 | Coils | Coil | 235 | 264 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe14g00326 | Cpe-Chr14:1949527 | Cpe18g00703 | Cpe-Chr18:6961937 | 2.61E-20 | dispersed | |
Cpe18g00703 | Cpe-Chr18:6961937 | Cpe01g00042 | Cpe-Chr1:289192 | 4.49E-16 | dispersed | |
Cpe18g00703 | Cpe-Chr18:6961937 | Cpe04g01465 | Cpe-Chr4:11665662 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50904 | PF00226 | DnaJ | 3.60E-21 | CL0392 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00703 | K09506 | - | csv:101217729 | 865.144 |