Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00710 ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTCCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCACCGTTGCAGATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTATTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCTGCCCTTCGCCGTCGACGTGAAAGGCGATTCTACGGCGATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACTAAAGGGAAGTGGGTTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCATCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACAAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATCCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCGCCGACCGCTCCAATAAAGATGGGGCGGCTGGTGACTCATAG 942 43.21 MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKASSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7003353 7004294 + Cp4.1LG18g07140.1 Cpe18g00710 485171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00710 313 Pfam TCP family transcription factor 47 162 IPR017887 -
Cpe18g00710 313 ProSiteProfiles TCP domain profile. 47 105 IPR017887 -
Cpe18g00710 313 PANTHER TRANSCRIPTION FACTOR TCP5 18 313 - -
Cpe18g00710 313 MobiDBLite consensus disorder prediction 1 21 - -
Cpe18g00710 313 MobiDBLite consensus disorder prediction 1 29 - -
Cpe18g00710 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 313 IPR005333 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00710 Cpe20g00081 CCT
Cpe04g01456 Cpe18g00710 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00977 Cpe-Chr3:7885521 Cpe18g00710 Cpe-Chr18:7003353 2.37E-44 dispersed
Cpe10g00078 Cpe-Chr10:550276 Cpe18g00710 Cpe-Chr18:7003353 1.50E-24 dispersed
Cpe18g00710 Cpe-Chr18:7003353 Cpe19g01146 Cpe-Chr19:7689983 1.59E-24 dispersed
Cpe18g00710 Cpe-Chr18:7003353 Cpe02g01404 Cpe-Chr2:12257575 2.77E-39 wgd
Cpe18g00710 Cpe-Chr18:7003353 Cpe20g00081 Cpe-Chr20:421585 7.50E-42 wgd
Cpe18g00710 Cpe-Chr18:7003353 Cpe04g01456 Cpe-Chr4:11614584 4.86E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50905 PF03634 TCP 6.20E-24 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00710 - - csv:101218680 408.683