Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00713 ATGAAGGCTCGGCGTTTCGCTTCCACTGGATCCGTCGCCGGACTTACTGGCTTTGCCGTCTTGCTTCTCTTTATACTTTCCAGCTTCAGTTTCACTGCAACAGATTTAGCTGCTGGACGTGGTTTTGTTATCCGTTCACTAATTCATCCTGGTTATATGGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATTGCAGCTCCAGGTTGGACATTGGGGTGGACATGGGCAAAGAAAGAAGTAATTTGGAGCATGATGGGAGCCCAAACAACAGAACAGGGCGACTGTTCAAAATTCAAAGGAAATATTCCTCATTGCTGCAAGAAAGATCCAACCGTTGTGGATTTATTGCCAGGAACTCCTTACAATCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTGATAAACTCATGGGCCCAAGACCCAGCCAATGCAGCAAGTTCATTTCAAGTCAGTGTTGGTGCTGCAGGAACAAGTAACAAAACTGTCAAACTCCCCAAAAACTTCACCCTTAAAGCCCCAGGACCTGGATACACTTGTGGGCCAGCAAAGATTGTGAAGCCAACCAGATTTGTATCTGGAGATAAAAGAAGAATAACTCAAGCTTTGATGACGTGGAATATTACATGCACCTATTCTCAGTTCCTCGCTCAGAAGACACCCACTTGTTGTGTTTCCCTCTCTTCCTTCTACAATGATACTATAGTCAACTGCCCAACCTGCACATGCGGATGTCAAAATAACACGGCAGGTTCTGGGAGCTGTGTGGATCCGGACTCTCCATATTTAGCTTCAGTAGTCTCAACTCCTGATAAATCAGGCAGCAATGCACCCTTGGTTCAGTGTACCAGCCACATGTGCCCGATTCGAGTCCATTGGCACGTGAAGCTGAATTATAAGGATTACTGGAGGGTGAAGATCACAATCACCAATTTCAATTACAGAATGAACTACACACTCTGGAATCTCGTGGTGCAGCATCCCAATTTTGATAACATTACTAAATTATTCAGCTTTAACTACAAGTCGTTGAGCCCATATGGTGACCTAAATGATACTGCGATGTTGTGGGGAGTTAAGTTCTACAATGATCTGCTCAATCAAGCTGGCCCTCTTGGTAATGTGCAATCTGAGCTCCTATTTCAGAAAGACCAGAACACTTTCACTTTCGACAAGGGTTGGGCTTTTCCAAGAAGAGTTTATTTCAATGGTGATAACTGTGTGCTGCCACCTCCAGATGCCTATCCTTATTTGCCAAATGCCAGTTCCAGACCAGCTATATCTCTACTTATGACCATCTTAATATCTTTGACATTACTGTTGAATTTTGCACAATAA 1344 43.9 MKARRFASTGSVAGLTGFAVLLLFILSSFSFTATDLAAGRGFVIRSLIHPGYMAVVTMYNFQQYRHIAAPGWTLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAASSFQVSVGAAGTSNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTRFVSGDKRRITQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGSGSCVDPDSPYLASVVSTPDKSGSNAPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITKLFSFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVLPPPDAYPYLPNASSRPAISLLMTILISLTLLLNFAQ 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7036903 7040972 + Cp4.1LG18g07130.1 Cpe18g00713 485174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00713 447 PANTHER PROTEIN COBRA 10 443 IPR006918 GO:0010215|GO:0031225
Cpe18g00713 447 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
Cpe18g00713 447 PIRSF COBRA 21 447 IPR006918 GO:0010215|GO:0031225
Cpe18g00713 447 PANTHER COBRA-LIKE PROTEIN 10 443 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01449 Cpe18g00713 CCT
Cpe04g01449 Cpe18g00713 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01449 Cpe-Chr4:11570360 Cpe18g00713 Cpe-Chr18:7036903 0 dispersed
Cpe18g00713 Cpe-Chr18:7036903 Cpe18g00714 Cpe-Chr18:7039262 4.02E-31 tandem
Cpe15g00578 Cpe-Chr15:6611543 Cpe18g00713 Cpe-Chr18:7036903 1.83E-25 transposed
Cpe18g00713 Cpe-Chr18:7036903 Cpe02g01399 Cpe-Chr2:12223631 0 wgd
Cpe18g00713 Cpe-Chr18:7036903 Cpe20g00086 Cpe-Chr20:461896 1.57E-30 wgd
Cpe18g00713 Cpe-Chr18:7036903 Cpe04g01448 Cpe-Chr4:11568796 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00713 - - csv:101213424 855.514