Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00714 ATGGAAATCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCGACAGCAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGACGGCAGATGGATATGTTGCTGCAGTGACAATGAATAATTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCAGTAGACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTAATGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCGTTTCTACCCAACTCTGCGCCTGGAGGGTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAA 744 43.15 MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVDDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGGSSAVAKFTATLLLILWFLL 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7039262 7042664 - Cp4.1LG18g07210.1 Cpe18g00714 485175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00714 247 PANTHER PROTEIN COBRA 20 152 IPR006918 GO:0010215|GO:0031225
Cpe18g00714 247 PANTHER COBRA-LIKE PROTEIN 153 244 - -
Cpe18g00714 247 PANTHER PROTEIN COBRA 153 244 IPR006918 GO:0010215|GO:0031225
Cpe18g00714 247 Pfam COBRA-like protein 60 160 IPR006918 GO:0010215|GO:0031225
Cpe18g00714 247 PANTHER COBRA-LIKE PROTEIN 20 152 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00714 Cpe20g00086 CCT
Cpe04g01448 Cpe18g00714 CCT
Cpe18g00714 Cpe20g00086 ECH
Cpe04g01448 Cpe18g00714 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01448 Cpe-Chr4:11568796 Cpe18g00714 Cpe-Chr18:7039262 1.29E-49 dispersed
Cpe18g00714 Cpe-Chr18:7039262 Cpe20g00086 Cpe-Chr20:461896 1.96E-23 dispersed
Cpe18g00713 Cpe-Chr18:7036903 Cpe18g00714 Cpe-Chr18:7039262 4.02E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00714 - - csv:101221756 304.293