Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe18g00739 | ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCTAATTCCCCTGACCGTTCCCTCTCCGGTCCGCCCAACTGTGTCCCTTCTCAACAATCCCTCTCTCCTCCTACCAATTCCTTGTCTCCGGTTATGATCCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGCTCTGCTGTTCTTCCTGTTCCGGCTCCTGCCAATTGGAGGAATTCTGCTGATCAGATTCCTGTTGGCAGCTATAACCCTTCCGAGACGCTGCTTGCGACGTCCCCTATGGCGTCGCCTTCCAGTAGAATTGAGGACGAAGAGCTGGAGATGTCGGAGGATTCCTCCACCTCCGTTTGGTATCGCCGGAGTGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCCACATGGCGGCCAAGTCGTCCGAGAACTCGCAGGCGCTGCCTCTTAAGGCGTTGGAACCTAATAAGCCTGCTGGAGTTTCAGAAAAGAACGGAGGGGCATCCACAGAGGTACAGAATCGACAACCACCATCAAATTCGAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGAGCTCTACAGGAGGCACAACGAGCTGCAAAAGGTGAGGCGAATAAGTCAGGTAATGCTCCTGGTAAAGCTGTGAAGCAGTCATTGGCTATGAAAGATAACAATGCGACGCCTTCGGTTGCACCTACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTCGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTCGTGTCAAAGTTTTTCCAACTTGACCCTATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCTATCAAAGACTACTCAACTCCGCCACAGAAGGTTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGTAGGCCACTATCTGTTAGCATGGGAAATGCTATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACGCTTTGCTCAGATATCGATCGCTTTATCAATGAAAAGATTATAATAGCGGCTGAGGTCATAGTTAGACATGCTGCTACTAAAATAAGGGATGGAGATGTTCTTCTTACATATGGATCATCGTCTGTTGTAGAGATGCTTCTATTACATGCCCATGAACTTGGAAAAGAATTCCGTATTGTGGTGGTGGATTCCCGTCCAAAACAAGAAGGGCGAGCATTGCTTCGTAGGCTCATAGAGAGGGGCCTAAATTGTACATACACTCATATCAATGCTATTTCTTATGTGATGCATGAAGTGACGCGAGTTTTTCTCGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCTAATGCATTCCGTGTTCCAGTCTTAATCTGCTGCGAAGCTTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGATCCAGATGCTATCTCAAAGGTTCCCGAAAGGAAGGATATAAATTATCTAGATAATATGACTGCTAAAGAACAATTGCAACTTCTAAATTTAATGTATGACGCTACTCCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCACCTACAAGCGTGCCGGTGATCGTGCGCGAGTATCGGAGAGAGCACCTATGGATATAA | 1950 | 46.05 | MDARRGSRIVNPKVRQVGFFTLDAPNSPDRSLSGPPNCVPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPMASPSSRIEDEELEMSEDSSTSVWYRRSGSGKIASSFPGVGIHMAAKSSENSQALPLKALEPNKPAGVSEKNGGASTEVQNRQPPSNSKPLKAKTTKAERRALQEAQRAAKGEANKSGNAPGKAVKQSLAMKDNNATPSVAPTDKRGGDRTLDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKVLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDIDRFINEKIIIAAEVIVRHAATKIRDGDVLLTYGSSSVVEMLLLHAHELGKEFRIVVVDSRPKQEGRALLRRLIERGLNCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFRVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPERKDINYLDNMTAKEQLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI | 649 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 7184511 | 7189808 | + | Cp4.1LG18g07260.1 | Cpe18g00739 | 485200 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 153 | 278 | - | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 78 | 127 | - | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 198 | 212 | - | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 251 | 278 | - | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 21 | 63 | - | - | |
| Cpe18g00739 | 649 | Gene3D | - | 435 | 642 | IPR042529 | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 26 | 51 | - | - | |
| Cpe18g00739 | 649 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 1 | 649 | - | - | |
| Cpe18g00739 | 649 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 1 | 649 | - | - | |
| Cpe18g00739 | 649 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 295 | 642 | IPR037171 | - | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 86 | 110 | - | - | |
| Cpe18g00739 | 649 | Pfam | Initiation factor 2 subunit family | 341 | 632 | IPR000649 | GO:0044237 | |
| Cpe18g00739 | 649 | MobiDBLite | consensus disorder prediction | 178 | 197 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01920 | Cpe-Chr1:16372713 | Cpe18g00739 | Cpe-Chr18:7184511 | 9.88E-19 | dispersed | |
| Cpe04g01424 | Cpe-Chr4:11433515 | Cpe18g00739 | Cpe-Chr18:7184511 | 0 | dispersed | |
| Cpe17g00426 | Cpe-Chr17:3191706 | Cpe18g00739 | Cpe-Chr18:7184511 | 1.92E-14 | dispersed | |
| Cpe18g00739 | Cpe-Chr18:7184511 | Cpe04g01423 | Cpe-Chr4:11427317 | 1.62E-98 | wgd | |
| Cpe18g00739 | Cpe-Chr18:7184511 | Cpe04g01423 | Cpe-Chr4:11427317 | 1.62E-98 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe18g00739 | K03680 | - | csv:101215104 | 1174.07 |