Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00780 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAAATCTCCGAGAGAGTCTATGTGTTTGATTGCTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTGCAGGGCCACTTTCCCGATGCCTCTTTCATGGTTTTCAACTTCAGAGAAGGTGATAAGCGTAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTACTGTCATTGGAGATGGTTCACCACTTCCTTCGATCTAGTGAAAGCTGGTTGTCGGTGGAGGGTCAACAGAATGTTCTATTGATGCACTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTCTTGTATAGAAAACAATACAGTGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCATCTGAGATACCTTCAATACATTTCCAGGAGAAATTTAGGTTCCGATTGGCCTCCATCAGATACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAGGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAACACCAGCAAATAGAACTTCAAGGCTTTTATTTTCAACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTCCAAGGAGACGTAGTTCTTGAATGCATCCATTTGGATGAAGATCTAGTGCACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTCGTAAGATCAAACATTATGATGCTGAACCGTGACGAAGTTGATGTTTTATGGGATGCAAAGGACCAGTTTCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACAGCCTTAGACGATGAAGATGGTAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGGTCCAATGATCCTCAAGTGGTCAAGCATATCAACCATAACGAAGATTTGAAGGAGGACTTGGATCCTCCTGCATTCCAAGATTGTGCATCTGACGATGGAAATCATCTTAGGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAGGTACAAACGGGATGAAAATATATATCCTGATCTTAATGTAGTTAAGGACATTGGTGTAGATGATGGGGATATGAATTCAAATTCCTTCATGGTTGCTGCTAATGTCCTGACCCATGTGGAAGCCCAGGGTTTGGTGGATGATGCATACGAGAAATTTGAAGATATAGAAGAAAAGGATGATGGTAGATATACAACTGAGAAATTTGAAAACAAGACTCTGCAGAAAAAGTTGAGTGCTGATGGTTCAGAATCTGAAAAATTGCAAAAACCGATTTCCAAGAAACAGCCTATTTCAAGTGCAGAACCGACCACTGATATGGGTTTAACTGAACAGAGAGTCGAACAACAAGAGGCTCAAGGGTTTTCTGCAAAACAAGCAAGGCCAAATATAGTTTCTAGGTGGATCCCACCTAACAAAGGCTCCTATATGAATTCTGTGCATGTTTCCTATCCGCCTTCAAGATATAACAGTGCCCCTGCTGCCACTCTCAGTTCCCTAGTTGCTACAGATGTGAATAATGACGTGGATTCTGTAAGGCCTTCATACTCTGCACTTGGGGAACTCGTGCTTGGCCCATCGTCTCCAGTTGAGTCGATAGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACACTGCGATCCACAACTTGAAGTACCTCCTCCCCCACTGCCCACAAAGCCTCCATCTCCATATTTTCCATCACCCCCCCGAGCAAATGCAATACCTCCTCCACCACCTCCACCACCTACTTCATTTCATCATATTGAGTCAACGTACTCTCCTCCACCACTTTCTGTGTCTTCAGCACCACCACCCCTAGTTAGCTCATCAAACACAGTGACTACCCCTTCCCCTTCCCCTCCCCCTCCTCCTCCCCCTCCCCCTCCATTCAGCAGGCAGAGTAGTGTTTTTCCCCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTATTGCAATGGTGGCTGGTTCTATACCGCCTCCACCTCCACCACCCCCACCCCCACCACCACCTTTCTCCTCTCTCTCTCTGGTTAGGCCATATACATCAAAGAATATTGTAAGTACTCCTCCAGCACCTGTTTTATCCCCTCCCCCACCTTCTGTGATGAATGAAACACTTGCTTCACCACCTCCACCATCCTCACCTGCTTCAGTATATGGTGATAAAGCGTCACCGACTCTAGCATCTACAGCACCCTCCCCTATTACTTCAGTTCATGGTGCTTCTCCACCCCCACCCCCACCCTCATCCTCACATATTAGTTCAGTTCATGGTGCTTCCTCGCCCCCGCCTTTAGCACCTCAAACAACCCCACCTATTACTATAGTGCATCGTCTGCCCCCGCCCCCACNCCCACCCCCATTAATGTATGAGGCATTTCCTTCAGCATCTCTAATGAAAAGCACACCACCTCCACCACCTCCACCCCCACCCATGCATGGTGCATCTCCAACACTATCTTTATTAGGACCACCACCTCCTTCGATGCATGGGGCTTTTCCACCATTGCCTCCTCCACCACCTCCGCCTCCACCAATCCATGGGACTCCGTCACCATCACCACCCCCACCACCACCGCCTCCACCAATGCACGGGGCTCCTCCCCCACCACCACCTCCTCCATCAATGCATGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCACCACCACCTCCACCAATGCATGGGACTCCTCCACCCCCGCCACCACCTCCTCCTATGTATGGGGCTCCTCCCCCACCACCACCTCCTCCAATGCATGGGGCCCCTCCCCCGCCGCCGCCACCACCCGGTGGAGGGAGAGCGCCTCCCCCGCCGCCGCCACCACCCGGTGGAGGGAGAGCCCCTCCCCCGCCGCCGCCACCACCCGGTGGAGGGAGAGCCCCTCCCCCGCCGCCGCCACCACCCGGTGGAGGGAGAGCCCCTCCCCCGCCTCCACCACCACCCGGTGGAGGGAGAGCCCCTCCCCCGCCTCCACCACCACCCGGTGGTGGGAGAGCCCCACCCCCGCCTCCACCACCACCCGGTGGTGGGAGAGCCCCACCCCCGCCTCCACCACCCGGTGGTGGGAGAGCCCCTCCACCGCCTCCCCCACCCGGTGGTGGGAGAGCCCCACCACCACCTCCCCCACCGGGTGGTGGTGGAGCCCCAGCACCCCCTCCCCCTCCGGGAGGTCGTGGAGCCCCACCCCCTCCTAGACCTCCTGGTGGTGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAGAGGAGCAAACGCTCCACCTGACCCTAGAGGTTTGTCCTCTGGAAGAGGGCGTGGGCTATCACGCTCAACAGCTACAGCACCTCGAAGGTCCTCCTTAAAGCCCCTACATTGGAGCAAAGTAACGAGAGTTCTGCAAGGGAGCCTGTGGGAAGAACTGCAGAGATATGGAGAACCTCAAATTGCACCAGAGTTTGATGTGTCTGAGTTGGAGAGCCTCTTTTCTGCAAATGTTCCCAAACCTGCTGATGGAGGTAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAAGTGACAAAGTTCACCTGATTGACCTCAGAAGAGCTAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCTCTTCCTGATATGATGGCTGCAGTGCTAGCTATGGACGAGTCAGTATTAGACGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGTTGAGAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGTCGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCATTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTTAATTTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAAGTGATGGTCCAGTCTCTGAAATTTTTCGCAAGACGCTGAAAGAATTTATTGCTATCGCTGAGACAGAGGTGGCATCAGTGACAAATCTATACTCTACTGTGGGTAGAAACGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGTTGTCCATTTGAGCAGGTTACAGTGACATTATTGAACTTCATGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCCGAACTGGAAAGGAAAAAGGCGGAGAAAGAAGCTGAAATGGAGAAAGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 5430 50.88 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQGHFPDASFMVFNFREGDKRSQISDVLTQYDMTVMDYPRQYEGCPLLSLEMVHHFLRSSESWLSVEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSRLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHLDEDLVHEEMMFRVMFHTAFVRSNIMMLNRDEVDVLWDAKDQFPKDFRVEALFLDADAVVPSLTTALDDEDGNETGAASPEEFFEVEEIFSNAMDGQEAKGSNDPQVVKHINHNEDLKEDLDPPAFQDCASDDGNHLRHDKKSDFDAVKDITVDDVRYKRDENIYPDLNVVKDIGVDDGDMNSNSFMVAANVLTHVEAQGLVDDAYEKFEDIEEKDDGRYTTEKFENKTLQKKLSADGSESEKLQKPISKKQPISSAEPTTDMGLTEQRVEQQEAQGFSAKQARPNIVSRWIPPNKGSYMNSVHVSYPPSRYNSAPAATLSSLVATDVNNDVDSVRPSYSALGELVLGPSSPVESIEETYSSSETLKPSHCDPQLEVPPPPLPTKPPSPYFPSPPRANAIPPPPPPPPTSFHHIESTYSPPPLSVSSAPPPLVSSSNTVTTPSPSPPPPPPPPPPFSRQSSVFPHSSTQPSWEQIYSSVSIAMVAGSIPPPPPPPPPPPPPFSSLSLVRPYTSKNIVSTPPAPVLSPPPPSVMNETLASPPPPSSPASVYGDKASPTLASTAPSPITSVHGASPPPPPPSSSHISSVHGASSPPPLAPQTTPPITIVHRLPPPPXPPPLMYEAFPSASLMKSTPPPPPPPPPMHGASPTLSLLGPPPPSMHGAFPPLPPPPPPPPPIHGTPSPSPPPPPPPPPMHGAPPPPPPPPSMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPPPMHGTPPPPPPPPPMYGAPPPPPPPPMHGAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGRGAPPPPRPPGGGGPPPPPPLGARGANAPPDPRGLSSGRGRGLSRSTATAPRRSSLKPLHWSKVTRVLQGSLWEELQRYGEPQIAPEFDVSELESLFSANVPKPADGGKSGGRRKSVGSKSDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNTVNSACVEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVRQELVASESDGPVSEIFRKTLKEFIAIAETEVASVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFMRLFRKAHEENCKQAELERKKAEKEAEMEKAKGISLTKKSVK 1809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7393833 7409228 + Cp4.1LG18g07830.1 Cpe18g00780 485241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00780 1809 Gene3D Formin, FH2 domain 1395 1783 IPR042201 -
Cpe18g00780 1809 PRINTS Kv3.3 voltage-gated K+ channel signature 721 734 IPR005404 GO:0005249|GO:0006813|GO:0016021
Cpe18g00780 1809 PRINTS Kv3.3 voltage-gated K+ channel signature 966 982 IPR005404 GO:0005249|GO:0006813|GO:0016021
Cpe18g00780 1809 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1356 1791 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 769 788 - -
Cpe18g00780 1809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cpe18g00780 1809 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cpe18g00780 1809 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Cpe18g00780 1809 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 833 851 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 628 754 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 724 742 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 401 423 - -
Cpe18g00780 1809 PANTHER FORMIN-J 1307 1802 - -
Cpe18g00780 1809 PANTHER FORMIN-J 1 743 - -
Cpe18g00780 1809 Coils Coil 1678 1698 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 804 830 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 531 550 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 913 1377 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 637 652 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 514 530 - -
Cpe18g00780 1809 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1397 1797 IPR015425 -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 789 803 - -
Cpe18g00780 1809 Coils Coil 1772 1801 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 656 694 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 514 550 - -
Cpe18g00780 1809 SMART PTEN_C2_2 198 1509 IPR014020 -
Cpe18g00780 1809 Pfam Formin Homology 2 Domain 1402 1771 IPR015425 -
Cpe18g00780 1809 Gene3D - 205 336 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 766 1407 - -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 878 904 - -
Cpe18g00780 1809 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cpe18g00780 1809 SMART it6_source 657 1807 IPR015425 -
Cpe18g00780 1809 MobiDBLite consensus disorder prediction 1450 1471 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe18g00780 Cpe20g00055 CCT
Cpe04g01480 Cpe18g00780 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00327 Cpe-Chr2:1729095 Cpe18g00780 Cpe-Chr18:7393833 2.17E-173 dispersed
Cpe06g00297 Cpe-Chr6:1626314 Cpe18g00780 Cpe-Chr18:7393833 1.82E-171 dispersed
Cpe15g00167 Cpe-Chr15:1385769 Cpe18g00780 Cpe-Chr18:7393833 8.11E-140 dispersed
Cpe18g00562 Cpe-Chr18:6145810 Cpe18g00780 Cpe-Chr18:7393833 6.29E-158 dispersed
Cpe18g00780 Cpe-Chr18:7393833 Cpe20g00055 Cpe-Chr20:268773 0 dispersed
Cpe18g00780 Cpe-Chr18:7393833 Cpe02g01046 Cpe-Chr2:9648943 0 wgd
Cpe18g00780 Cpe-Chr18:7393833 Cpe04g01480 Cpe-Chr4:11754724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00780 - - cpep:111780176 1640.94