Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe18g00799 | ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA | 720 | 53.19 | MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGGQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 7484052 | 7484771 | + | Cp4.1LG18g07860.1 | Cpe18g00799 | 485260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe18g00799 | 239 | MobiDBLite | consensus disorder prediction | 213 | 239 | - | - | |
| Cpe18g00799 | 239 | MobiDBLite | consensus disorder prediction | 224 | 239 | - | - | |
| Cpe18g00799 | 239 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 238 | IPR005333 | GO:0003700 | |
| Cpe18g00799 | 239 | MobiDBLite | consensus disorder prediction | 58 | 101 | - | - | |
| Cpe18g00799 | 239 | MobiDBLite | consensus disorder prediction | 58 | 72 | - | - | |
| Cpe18g00799 | 239 | PANTHER | TRANSCRIPTION FACTOR TCP14-LIKE | 1 | 238 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe18g00799 | Cpe20g00029 | CCT | |
| Cpe18g00799 | Cpe20g00029 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01458 | Cpe-Chr1:8738376 | Cpe18g00799 | Cpe-Chr18:7484052 | 6.73E-33 | wgd | |
| Cpe18g00799 | Cpe-Chr18:7484052 | Cpe20g00029 | Cpe-Chr20:145294 | 1.44E-17 | wgd | |
| Cpe18g00799 | Cpe-Chr18:7484052 | Cpe04g01505 | Cpe-Chr4:11884058 | 1.44E-25 | wgd | |
| Cpe18g00799 | Cpe-Chr18:7484052 | Cpe09g00170 | Cpe-Chr9:997754 | 2.29E-29 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe18g00799 | - | - | csv:101221049 | 347.821 |