Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00805 ATGGGTCTCTTCATTTGTGTCTTCTCCATGATTGTAGCAGCAACCCTTTTAAGCCACTGCTCTGTTTCTCTCACTGAAGATGGTTTAACATTGTTGGAAATCAAAAGTGGTTTAAATGACACTAAGAACGCTCTCAGTAATTGGAGCCCTTCAGATGAATCTCCCTGCCAATGGACTGGTATCTCTTGCCATCCCCAGGACTCTCGTGTCAGCTCAATTAATCTACCATACATGCAACTGGGAGGGATTATATCTCCCAGCATTGGTAAACTTAGCAGATTGCAAAGACTGGCTCTCCACCAAAACGGCTTACATGGATACATCCCCAATGAACTTGCTAATTGTTCTGAACTTAGAGCACTGTACCTGAGGGCTAATTATCTTGAAGGTGGCATTCCATCAAATATTGGAAACCTTTCTTACCTTGCCATACTGGATCTATCAAGCAATTCCTTTAAGGGAAGCATACCATCATCAATTGGTCGTCTCACACACTTGCGCAATCTGAATTTATCTACCAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTTAGCACCTTTGGGAATGACTCGTTCCTTGACAATCAAGGTCTTTGTGGCCGGCAAGTGAACAAGCCGTGCCAGACCTCACTGGGATTTCCTGCCGTCTTACCACATGCTGAAATTCCTGCAAAACGATCCTCTCATTACTTGAAGGGACTGTTGATTGGTGCAATATCGACAGCGGGGTTCGTGTTGGTCGTACTTATTGTGTTCATGTGGACTCGTTTGCTGTCAAAGAAAGAACGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAGAAACTACGAACCAAGTGAGAAGCTTATTACATTCCATGGCAATCTTCCATATCCAACATGTGAGATCATAGAGAAGCTGGAGGGCCTTAATGAGACACATGTTATTGGCTCGGGCGGGTTAGGCACTGTGTATCGGATGGTCATGAATGATCGTGGAACATTTGCTGTAAAGAAAATAGATAGGACTCAGGATGGTTCAGAGCAAGTAGTTGAAAGAGAATTGGAGATATTGGGAAGCATTAAACACATAAACATAGTGAAACTGCGTGGCTATTGCAGGCTTCCTTCTTCAAAGCTTCTGATATATGATTATCTGACAGAGGGTAGCTTGGATGATTTCTTGCACGATGTGGAAACATTAGAAGCAATTCTCGAAATAGCGGCGAGGTGCACTAATGGCAACCCGGCTATGCGGCCTACAATGAACCAAGTACTGCAGCTGCTAGAGCGAGAGGATGAAGAAAGAATGAAAAGGACGAAAGCAGAAATGAGGGAAGTAAGGGAAGAAAACGAGAGACTTAAGAAACGTTTGGATGAAACAATGAAGAATTACGAGACACTGAAAAGGCAGCTCCAGCTCCATGAAATGGGTCAACTCAGAGAACCAAAAAAGTCAACACAAACAACTGCAATTGCCATACGTAACCATGAGGTTGAAGAAATGGACCAAGTGGTTTCACTCACATTAGGAAGAAGATTATTCAACAACATTTCCTCACCAACAAAATCAGATCCTCAAAACGTGGGCTTTCTGGGTTTGCCGGCGCCCCCCACCGGAGAAGATGAACTTTCTCGGCACAATCCTCCCAAGAAACCTAGGGTTTCTGTGAGAGCCCGGTGTGATGCCCCGGTGCAAATGAGTGTTGATGATATTTCCATACTAATCACCACCTATGAAGGAACTCACAACCATCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCGGCTGCCGCCTCGATGCTCCTCTCGGGCCCTTCTTCATTCGCCACCGCTGCGGCGAATCTCCATGGATTGAACTCGTATCTCTCTAACAACACAAATTCAAAGGGATTCTACTTGCCAAACTCTTCAACGCTATCTTCTTCTCTCAACCATCCCACAATCACTTTAGACCTCACTTCAAACTCTCCCTCAACTAATTATCTCCCAAAGTTTCCTCTTGATTTTGGCTCTTCTCAATACAGCTTCATGCCTTGGAACAATAGTAACAGTGGCTATGGCTATGGCAATGCCAATCAAGCCGGTCATCAACAATTTTCCAAATCTTCAACTCCGCCCCCGCCATTGTCGTCACCTCTACCGGACACGATTGCAGCAGCAACTAAGGCGATTACGTCTGACCCGAATTTCCATTCGGCATTGGCAGCTGCCCTGAGCTCGATCATCGGCGGCGGGAATGGGAGCAAGACAGCTCCTCCAATGGCTAGCTATGTTGAAGAACCTCAGGGAAATGTGTGTGCATCATCAAGTTTAAGCTCTCAACAAGGAAGTATGGGGTTTGAGGCAGCTAAATCATTATCATGCTCCACCTCCAAGAGTCCTTCCTCATCTCCTGGGGATAGTAGAGAAAATGGCAAGTGA 2421 45.23 MGLFICVFSMIVAATLLSHCSVSLTEDGLTLLEIKSGLNDTKNALSNWSPSDESPCQWTGISCHPQDSRVSSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRALYLRANYLEGGIPSNIGNLSYLAILDLSSNSFKGSIPSSIGRLTHLRNLNLSTNFFFGEIPDIGVLSTFGNDSFLDNQGLCGRQVNKPCQTSLGFPAVLPHAEIPAKRSSHYLKGLLIGAISTAGFVLVVLIVFMWTRLLSKKERTAKSYMEVKKQRNYEPSEKLITFHGNLPYPTCEIIEKLEGLNETHVIGSGGLGTVYRMVMNDRGTFAVKKIDRTQDGSEQVVERELEILGSIKHINIVKLRGYCRLPSSKLLIYDYLTEGSLDDFLHDVETLEAILEIAARCTNGNPAMRPTMNQVLQLLEREDEERMKRTKAEMREVREENERLKKRLDETMKNYETLKRQLQLHEMGQLREPKKSTQTTAIAIRNHEVEEMDQVVSLTLGRRLFNNISSPTKSDPQNVGFLGLPAPPTGEDELSRHNPPKKPRVSVRARCDAPVQMSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSFATAAANLHGLNSYLSNNTNSKGFYLPNSSTLSSSLNHPTITLDLTSNSPSTNYLPKFPLDFGSSQYSFMPWNNSNSGYGYGNANQAGHQQFSKSSTPPPPLSSPLPDTIAAATKAITSDPNFHSALAAALSSIIGGGNGSKTAPPMASYVEEPQGNVCASSSLSSQQGSMGFEAAKSLSCSTSKSPSSSPGDSRENGK 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7509306 7516863 - Cp4.1LG18g08130.1 Cpe18g00805 485266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00805 806 ProSiteProfiles Protein kinase domain profile. 306 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00805 806 MobiDBLite consensus disorder prediction 688 704 - -
Cpe18g00805 806 Coils Coil 426 471 - -
Cpe18g00805 806 Pfam Protein kinase domain 308 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00805 806 SUPERFAMILY L domain-like 25 192 - -
Cpe18g00805 806 SUPERFAMILY Protein kinase-like (PK-like) 280 396 IPR011009 -
Cpe18g00805 806 Gene3D Phosphorylase Kinase; domain 1 266 381 - -
Cpe18g00805 806 ProSiteProfiles WRKY domain profile. 561 584 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe18g00805 806 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 397 - -
Cpe18g00805 806 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Cpe18g00805 806 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 397 - -
Cpe18g00805 806 MobiDBLite consensus disorder prediction 763 806 - -
Cpe18g00805 806 MobiDBLite consensus disorder prediction 515 555 - -
Cpe18g00805 806 MobiDBLite consensus disorder prediction 540 554 - -
Cpe18g00805 806 MobiDBLite consensus disorder prediction 688 715 - -
Cpe18g00805 806 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01513 Cpe18g00805 CCT
Cpe18g00805 Cpe20g00199 CCT
Cpe04g01513 Cpe18g00805 ECH
Cpe18g00805 Cpe20g00199 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00591 Cpe-Chr2:3536733 Cpe18g00805 Cpe-Chr18:7509306 3.68E-101 dispersed
Cpe04g01517 Cpe-Chr4:11950097 Cpe18g00805 Cpe-Chr18:7509306 0 dispersed
Cpe06g00589 Cpe-Chr6:3606362 Cpe18g00805 Cpe-Chr18:7509306 1.92E-103 dispersed
Cpe18g00805 Cpe-Chr18:7509306 Cpe07g00017 Cpe-Chr7:106748 1.06E-50 dispersed
Cpe18g00805 Cpe-Chr18:7509306 Cpe20g00199 Cpe-Chr20:1150014 2.79E-27 wgd
Cpe18g00805 Cpe-Chr18:7509306 Cpe04g01513 Cpe-Chr4:11927860 8.27E-92 wgd
Cpe18g00805 Cpe-Chr18:7509306 Cpe09g01063 Cpe-Chr9:9264529 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63004 PF00069 Pkinase 9.90E-14 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00805 - - csv:101217728 696.427