Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00807 ATGGAAGAAAAGGGCGAGAAGCCTGAGGTTTTGGAGGCTGTGTTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTTTTTGATAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGGCTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAATTCTTGAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTGTCGCCCTGTTGCTTATCAACTCAACAATTAGTTTTATTGAGGAAAACAATGCCGGTAACGCTGCAGCTGCTCTAATGGCTAGCTTAGCTCCCCAAGCCAAGATTCTCCGAGATGGAAGGTGGAGTGTGCAAGATGCTTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATAATTCCAGCTGATGCTCGTCTTCTAGAAGGGGACCCATTGAAAATTGATCAGTCTGCTCTTACAGGCGAGTCTCTTCCTGTTACGAAAGGTCCGGGTGATGGCATATATTCTGGTTCTACTTGTAAACAGGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTTCATACTTTCTTTGGCAGAGCAGCTCACCTTGTTGACACCACTAATCAAGTGGGACACTTCCAGAAGGTCTTAACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTTTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGTGAATATCGTCCTGGAATTGACAATCTTCTCGTGCTTCTGATTGGAGGAATTCCCATTGCCATGCCCACAGTCCTCTCTGTGACCATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGATAAGACTGGAACACTTACATTAAACAAGCTAACTGTCGACAAAAATCTTGTTGAGGTCAGTAAGGAAATGTAG 1080 44.54 MEEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGRAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVSKEM 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 7531941 7535560 - Cp4.1LG18g08140.1 Cpe18g00807 485268
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00807 359 Pfam Cation transporter/ATPase, N-terminus 23 86 IPR004014 -
Cpe18g00807 359 PANTHER PLASMA MEMBRANE ATPASE 1 6 356 - -
Cpe18g00807 359 SMART Cation_ATPase_N_a_2 20 92 IPR004014 -
Cpe18g00807 359 PANTHER CALCIUM-TRANSPORTING ATPASE 6 356 - -
Cpe18g00807 359 PRINTS P-type cation-transporting ATPase superfamily signature 334 348 - -
Cpe18g00807 359 PRINTS P-type cation-transporting ATPase superfamily signature 184 198 - -
Cpe18g00807 359 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 329 IPR023298 -
Cpe18g00807 359 Gene3D - 331 345 IPR023214 -
Cpe18g00807 359 Gene3D - 346 356 IPR023299 GO:0000166
Cpe18g00807 359 PRINTS Sodium/potassium-transporting ATPase signature 76 90 - -
Cpe18g00807 359 PRINTS Sodium/potassium-transporting ATPase signature 327 348 - -
Cpe18g00807 359 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 106 352 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe18g00807 359 Pfam E1-E2 ATPase 135 313 - -
Cpe18g00807 359 Gene3D - 99 330 - -
Cpe18g00807 359 Gene3D - 137 221 - -
Cpe18g00807 359 SUPERFAMILY Calcium ATPase, transduction domain A 137 234 IPR008250 -
Cpe18g00807 359 ProSitePatterns E1-E2 ATPases phosphorylation site. 336 342 IPR018303 -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00547 Cpe-Chr18:6045900 Cpe18g00807 Cpe-Chr18:7531941 1.43E-152 dispersed
Cpe18g00548 Cpe-Chr18:6048594 Cpe18g00807 Cpe-Chr18:7531941 5.66E-175 dispersed
Cpe01g02378 Cpe-Chr1:19893753 Cpe18g00807 Cpe-Chr18:7531941 1.07E-99 wgd
Cpe18g00807 Cpe-Chr18:7531941 Cpe20g00206 Cpe-Chr20:1186069 0 wgd
Cpe18g00807 Cpe-Chr18:7531941 Cpe04g01518 Cpe-Chr4:11954464 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00807 K01535 - csv:101217264 656.751