Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe18g00807 | ATGGAAGAAAAGGGCGAGAAGCCTGAGGTTTTGGAGGCTGTGTTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTTTTTGATAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGGCTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAATTCTTGAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTGTCGCCCTGTTGCTTATCAACTCAACAATTAGTTTTATTGAGGAAAACAATGCCGGTAACGCTGCAGCTGCTCTAATGGCTAGCTTAGCTCCCCAAGCCAAGATTCTCCGAGATGGAAGGTGGAGTGTGCAAGATGCTTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATAATTCCAGCTGATGCTCGTCTTCTAGAAGGGGACCCATTGAAAATTGATCAGTCTGCTCTTACAGGCGAGTCTCTTCCTGTTACGAAAGGTCCGGGTGATGGCATATATTCTGGTTCTACTTGTAAACAGGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTTCATACTTTCTTTGGCAGAGCAGCTCACCTTGTTGACACCACTAATCAAGTGGGACACTTCCAGAAGGTCTTAACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTTTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGTGAATATCGTCCTGGAATTGACAATCTTCTCGTGCTTCTGATTGGAGGAATTCCCATTGCCATGCCCACAGTCCTCTCTGTGACCATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGATAAGACTGGAACACTTACATTAAACAAGCTAACTGTCGACAAAAATCTTGTTGAGGTCAGTAAGGAAATGTAG | 1080 | 44.54 | MEEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGRAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVSKEM | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 7531941 | 7535560 | - | Cp4.1LG18g08140.1 | Cpe18g00807 | 485268 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe18g00807 | 359 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 86 | IPR004014 | - | |
| Cpe18g00807 | 359 | PANTHER | PLASMA MEMBRANE ATPASE 1 | 6 | 356 | - | - | |
| Cpe18g00807 | 359 | SMART | Cation_ATPase_N_a_2 | 20 | 92 | IPR004014 | - | |
| Cpe18g00807 | 359 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 6 | 356 | - | - | |
| Cpe18g00807 | 359 | PRINTS | P-type cation-transporting ATPase superfamily signature | 334 | 348 | - | - | |
| Cpe18g00807 | 359 | PRINTS | P-type cation-transporting ATPase superfamily signature | 184 | 198 | - | - | |
| Cpe18g00807 | 359 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 329 | IPR023298 | - | |
| Cpe18g00807 | 359 | Gene3D | - | 331 | 345 | IPR023214 | - | |
| Cpe18g00807 | 359 | Gene3D | - | 346 | 356 | IPR023299 | GO:0000166 | |
| Cpe18g00807 | 359 | PRINTS | Sodium/potassium-transporting ATPase signature | 76 | 90 | - | - | |
| Cpe18g00807 | 359 | PRINTS | Sodium/potassium-transporting ATPase signature | 327 | 348 | - | - | |
| Cpe18g00807 | 359 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 106 | 352 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe18g00807 | 359 | Pfam | E1-E2 ATPase | 135 | 313 | - | - | |
| Cpe18g00807 | 359 | Gene3D | - | 99 | 330 | - | - | |
| Cpe18g00807 | 359 | Gene3D | - | 137 | 221 | - | - | |
| Cpe18g00807 | 359 | SUPERFAMILY | Calcium ATPase, transduction domain A | 137 | 234 | IPR008250 | - | |
| Cpe18g00807 | 359 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 336 | 342 | IPR018303 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g01518 | Cpe18g00807 | CCT | |
| Cpe18g00807 | Cpe20g00206 | CCT | |
| Cpe18g00807 | Cpe20g00206 | ECH | |
| Cpe04g01518 | Cpe18g00807 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe18g00547 | Cpe-Chr18:6045900 | Cpe18g00807 | Cpe-Chr18:7531941 | 1.43E-152 | dispersed | |
| Cpe18g00548 | Cpe-Chr18:6048594 | Cpe18g00807 | Cpe-Chr18:7531941 | 5.66E-175 | dispersed | |
| Cpe01g02378 | Cpe-Chr1:19893753 | Cpe18g00807 | Cpe-Chr18:7531941 | 1.07E-99 | wgd | |
| Cpe18g00807 | Cpe-Chr18:7531941 | Cpe20g00206 | Cpe-Chr20:1186069 | 0 | wgd | |
| Cpe18g00807 | Cpe-Chr18:7531941 | Cpe04g01518 | Cpe-Chr4:11954464 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe18g00807 | K01535 | - | csv:101217264 | 656.751 |