Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00809 ATGGGGCGCAAGAAGAAAAACATTGATCCGCGTTCTAAACAATCTCCGTCGGTTCGTGGAGTCGCCGTTGATGCTTCGAGTTTACCAAACGCCGCCGACAAGAGTTCAATACCTGATAAGGCAAGTTGTAACAACCAAAGTAGGATCGAGTCGGTGTCTGTCAATGAATCGGATGGCTTCTCTTATTCCACAATTAAACTCGAATGCGAGCGGGCTCTTAACGTGCTTCGGCGCGGGAACCACTCTAAGGCACTTAGGCTTATGAAGGAGTTGAACTCCAAGATTAATAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAAGGTACTATTTGTGTCAAACTAGCATCGGTTATTGAGGACGTGAATACGAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGCAAAGCAGTCGAGCTCTCACCAAACTCGATTGAGTTTTCCCATTTTTATGCAAATTTGCTTTACGAGGGTGCAAATGATGCTAAGGAGTACGAGGAGGTGGTGCAAGAGTGTGAGCGGGCCCTTGGCATTGAAAATCCAATCGATCCCGCTAAAGAAAGCTTGCAAGATGAAAAGGATCAGAAAATACCTACTGCAGAAGCGCGAATTACACACGTTCAGACTGAATTGAGGCATTTAGTTCAAAAATCAAACATATACTCGATATCATCTTGGATGAAGAACTTGGGTAATGGGGAGGAGAAATTTAGGTTGATTCCGATTAGAAAAGTGACAGAGGACCCAATGGAGGCAACGTTGGTTCAGGCTAAGAGGGCAAATGAAATCAAGAAGGCAACGAAAACGCCTGAGGAGCGAAGGAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTGTTGCAACAGAAGTTTGAGTCGCCTCAAATGCAAAACGAAGGAGGTAAAGCTGATCGGACCCTGGATTCATCTTTAGGGTCTAGTACAAAAGTTGGTGAGCGGCGGAAACACGCCAATGTGCGGAAACATGGCTCTTCACGTGAAAGTAGGGATTGGGTTTATTCTTTTTGGAATTCCTTGAGTACAGAATCAAAGAAAGAGTTGCTTAAGATCAAGATAAGTGATCTTAAGACTCATTTTAGTTCTTCAAAGGATACCTTGGCAAATGAAGTTATTTCAGAAGCTGTGTCCTTTTATGATGCCAATAAAACATGGAATTTTTTGGTGTGTTGCAAATGTGATGAGAAATTTGTGTATCCGGAATCCCATATGCATCATGTGCTTCAAGAGCACATGGGTAACCTTTTGCCGAAAATGCAATCTATCATGCCACAGAATGTTGACAATGATTGGAGTCAAATGCTTCTAAATTGCTCTTGGAAACCATTTGATGTTTCAGCTGCAGCTAAAATACTCATAGGTCAAACAAAATGCAATGACTCGGAGTTGGTTAAGGATATCGACTTACAGCATCACTCAGAATGTGAAGAGTCTCTCAAAGATGCATGTGGTTCATCTCCAGAGAAGTATAATCATGGGCATGGTTTAAATGAACTCAAGCTTTATGAAAAAATTAGCAACAGCGGATTTGCATTATCTGATAGTTTTCCAGTATCTGATGACTCTGAGCGAACAACGCTTCTTGAAAAAATTCATGCGGTATTTGAGTTACTTATTGGACATAAATGCCTTGCTGCAAGCCATCTAAACAAGGTGATACAATTTGCAATGGATGAGTTACAGGGCATTGTTTCTGGATCTCATTTTCTAAAGCGGGGTCTGGACCAAACACCTCTATGTATTTGCTTTCTGGGCGCTTCTCAGCTTGGAAAAATCCTAAAGTTCTTGCAAGAATTATCTCAGTCTTGTGGTATTGGTAGATACTCTGATAAAAGTACTGGTCAAGTTGAAGATCCAGAGAGTGATAAACAAGCTGTTGATGTCAAAGAGAAACTTGTTCTCAATGGAGATGCGTCACTTCTCCTCCTAAACGAGTGTTTTCTGTCGTCTGATATCCCTCATGCCAATGATCAGGTTGCAGCCACAGATCATATGCCTGCTGCAACTGTTAAAGATACTACTGCAAATGAGGTTCTTTCTGATGTCGATTCTTTCCTATCTTGGATATATGCAGATCCCTCTAATGGGGAACAGGTAGCATCATGGACAAAAACAAAGGAAGAAAAGACAAAACAACAATTGGAAATTTTTCAAATGCTTGAGAAGGATTTTTACCTTCTGCAGAACCTTTGTGAGAGAAAATGTGAGCATTTGAACTATGAGGAAGCGTTGCAGTCAGTAGAGGATCTCTTCTTTGAGGAGAGCAAGAAGGAGGAAGCTACGGCTGAATTTATCCCCAAGAGTTATGTGTCAGTCCTGAGGAAGCGAAGAGAGGAGCTTCTTGAGACTGAAAATAATGTGATGTATATCGGCAGTAGGTTTGAGTTAGATGTTGTAACTAATATTTTGAAAGAAGCTGAAGCTCTGAAGGTTAATCAATTTGGATATGAGGAAACTGTTGCCAATGTGCCTTCTCAGTCATGTGATCTGGAATCCGGTGAAGATGAAAATTGGAGGGCCAAGGGTTATTTGCATCAAGTTGATACTTGTATAGAAATTGCAATAAAGAGACAGAAAGAACAATTATCTATTGAGGTTAGCAAAATCGATGCACGTATCATGCGGAATGTTTCCGGAATGCAAGAGATGGAACTTAAGCTCGAGCCTGTTTCAGCACATGATTATCAATCAGTATTGTTGCCTCTTGTGAACTCATACTTGAGGGCATATTTAGAAGATTTGGCTGAAAAAGATGCTACGAAGAAGTCTGATGCTGCAAGAGAGGCATTTTTAGCTGAACTGGCACTGGATTCAGAAAAAGGTATCAAAGGAGGAAGTGATAATTCGAGACATGCACATGAAAAGCCAAAGGAAAAGAAAAGGAGCAAGGAGTTTAGGAAATCCAAGGACTCTAAGGTGGTCAGTGGTCCTGAGCAGAATGTGTTTCATGATGGGGCTGTCGATGGAGTTCCCGTTCAAGTTTCACCTGATGGTGATGTGGCAAAGGTAGACGTTGCTGCTTTTGAGAACTCTGATGCTTTAAGACTACAGGAGGAAGAGCTTAGACGCAAAATTGAGCTGGAAGCAGATGAAAGAAGGCTAGAAGAGGCTCTGGAGTATCAAAGACGGGTTGAGAATGAGGCTAAACAAAAGCTTCTGGCTGAACTACAAAAGAAATCTGCCCAGACAAATCTAGAGGACAAAGTTGCTCTGGCAGAACATGATAATCCCATTGAACTCGTCCCCAGTGTTGAGGGTGCTGAAGAGCATTTTAAACCCTCTGTTGTGGATCAATTGGCAGAAAGTGAATCGATTCCCGGCTTGTCTAGGAATTTTCCTGCAATGCCAAATGCTGTTTCAGGTTCATACAATGCTGGAATTGTAGAGAATACCCCGCCACCTTCTGATAGGAAGAAGGGGAGGAAAGGTAGACGACACAAGGTTGCAATCAAACGAGTTGATGGAAATCAGCCTCCACAATCTTATAATGATAATGTAGCCTTTGACAACCAATTGAATGAGCAAGTCAGAGATCATGACAATCTCGTAGTAGATAGTGTTAATCCACTCTCTGAAGAAAATGGTACAAAGACTTTGGGACAACAACATGCGGAGGATGATGAGGAAAGATTTCAAGCTGACCTTAAGAAGGCTGTACGCCAGAGCCTTGATGCATTTCAAGAACAGCAGGAATTGCCATTGATTACAAGTTCCAGTACACCATCGATCAGCTGTGGTGAAGTAGATGGTAATGATCTTCCATCAAATGAACTCAACGTAGAGAATGTGCAGGAAGCAGATGTATTTGGTACAGGACTTAAAAATGAAGTTGGTGAATATAATTGCTTTCTGAATGTGATTATTCAGTCCTTATGGCATTTAAGATGGTTTCGAGAAGAGTTCCTGAGAAGATCTACGACTGAACATGTTCATGTTGGGGATCCTTGTGTTCTTTGTGCATTATATGAAATCCTTGCTGCCTTGAGCACGGCATCTGCAGATTCTAGAAGAGAAGCAGTCGCCCCCACTTCTTTGAGAATAGCTCTGAGCAATTTTTGTCCTGATAGTAATTTCTTCCAAGAGGGCCAGATGAATGATGCCTCTGAAGTGCTAGCAGTCATTTTTGATTGCCTACACAAGTCGTTGACTCGTAGCTCGGGTGTTTCTGATACAGAATCAGTGGAAAGCAATTGCATGGGGTCGTGGGACTGTGCAAGTGACACTTGTTTGGTTCATTCCATCTTTGGTATGGACATTTTTGAACGAATGAATTGCTATAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCCCATGCCCTTCGAACAATGAAGGTTATGTGTACAGAAAGCTCCTTTGATGAACTTCTGAATGTTGTTGAAATGAATCATCAGCTAGCTTGTGATTTGGATGTTGGTGGCTGCGGAAAGCTCAATTACATTCATCGCTTTCTCTCTGCAGCACCACACGTGTTCACAACAGTCTTGGGTTGGCAGAACACTTGTGAGAGTGCTGATGACATCACAGCGACATTAGCTGCTCTGAATACTGAAGTAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAATACTACCCATAATTTAGTATCAGTGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCCTACAGTCACGACAAGAAATGCTGGATAATGTACGATGATAAAACTGTTAAGGTAATTGGCGGCTGGCCTGATGTTCTTACCATGTGCGAAAAAGGACACTTGCAACCTCAGGTTCTTTTCTTTGAAGCTGTAGATTAG 4839 41.95 MGRKKKNIDPRSKQSPSVRGVAVDASSLPNAADKSSIPDKASCNNQSRIESVSVNESDGFSYSTIKLECERALNVLRRGNHSKALRLMKELNSKINNSVHSALIHRVQGTICVKLASVIEDVNTKQRHLKNAIESARKAVELSPNSIEFSHFYANLLYEGANDAKEYEEVVQECERALGIENPIDPAKESLQDEKDQKIPTAEARITHVQTELRHLVQKSNIYSISSWMKNLGNGEEKFRLIPIRKVTEDPMEATLVQAKRANEIKKATKTPEERRKEIEVRVAAARLLQQKFESPQMQNEGGKADRTLDSSLGSSTKVGERRKHANVRKHGSSRESRDWVYSFWNSLSTESKKELLKIKISDLKTHFSSSKDTLANEVISEAVSFYDANKTWNFLVCCKCDEKFVYPESHMHHVLQEHMGNLLPKMQSIMPQNVDNDWSQMLLNCSWKPFDVSAAAKILIGQTKCNDSELVKDIDLQHHSECEESLKDACGSSPEKYNHGHGLNELKLYEKISNSGFALSDSFPVSDDSERTTLLEKIHAVFELLIGHKCLAASHLNKVIQFAMDELQGIVSGSHFLKRGLDQTPLCICFLGASQLGKILKFLQELSQSCGIGRYSDKSTGQVEDPESDKQAVDVKEKLVLNGDASLLLLNECFLSSDIPHANDQVAATDHMPAATVKDTTANEVLSDVDSFLSWIYADPSNGEQVASWTKTKEEKTKQQLEIFQMLEKDFYLLQNLCERKCEHLNYEEALQSVEDLFFEESKKEEATAEFIPKSYVSVLRKRREELLETENNVMYIGSRFELDVVTNILKEAEALKVNQFGYEETVANVPSQSCDLESGEDENWRAKGYLHQVDTCIEIAIKRQKEQLSIEVSKIDARIMRNVSGMQEMELKLEPVSAHDYQSVLLPLVNSYLRAYLEDLAEKDATKKSDAAREAFLAELALDSEKGIKGGSDNSRHAHEKPKEKKRSKEFRKSKDSKVVSGPEQNVFHDGAVDGVPVQVSPDGDVAKVDVAAFENSDALRLQEEELRRKIELEADERRLEEALEYQRRVENEAKQKLLAELQKKSAQTNLEDKVALAEHDNPIELVPSVEGAEEHFKPSVVDQLAESESIPGLSRNFPAMPNAVSGSYNAGIVENTPPPSDRKKGRKGRRHKVAIKRVDGNQPPQSYNDNVAFDNQLNEQVRDHDNLVVDSVNPLSEENGTKTLGQQHAEDDEERFQADLKKAVRQSLDAFQEQQELPLITSSSTPSISCGEVDGNDLPSNELNVENVQEADVFGTGLKNEVGEYNCFLNVIIQSLWHLRWFREEFLRRSTTEHVHVGDPCVLCALYEILAALSTASADSRREAVAPTSLRIALSNFCPDSNFFQEGQMNDASEVLAVIFDCLHKSLTRSSGVSDTESVESNCMGSWDCASDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINAHALRTMKVMCTESSFDELLNVVEMNHQLACDLDVGGCGKLNYIHRFLSAAPHVFTTVLGWQNTCESADDITATLAALNTEVDISVLYRGLDPNTTHNLVSVVCYYGQHYHCFAYSHDKKCWIMYDDKTVKVIGGWPDVLTMCEKGHLQPQVLFFEAVD 1612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7543724 7552648 + Cp4.1LG18g08050.1 Cpe18g00809 485270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00809 1612 Gene3D Tetratricopeptide repeat domain 62 190 IPR011990 GO:0005515
Cpe18g00809 1612 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1611 - -
Cpe18g00809 1612 ProSitePatterns Zinc finger C2H2 type domain signature. 398 419 IPR013087 -
Cpe18g00809 1612 CDD Peptidase_C19 1371 1609 - -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 949 992 - -
Cpe18g00809 1612 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1279 1611 IPR028889 -
Cpe18g00809 1612 SUPERFAMILY Cysteine proteinases 1279 1609 IPR038765 -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 293 316 - -
Cpe18g00809 1612 Coils Coil 119 139 - -
Cpe18g00809 1612 Coils Coil 1019 1074 - -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 29 46 - -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 1131 1154 - -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 1 46 - -
Cpe18g00809 1612 Pfam Ubiquitin carboxyl-terminal hydrolase 1280 1587 IPR001394 GO:0004843|GO:0016579
Cpe18g00809 1612 Pfam Protein of unknown function (DUF629) 342 861 IPR006865 -
Cpe18g00809 1612 Pfam Protein of unknown function (DUF627) 71 181 IPR006866 -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 951 981 - -
Cpe18g00809 1612 MobiDBLite consensus disorder prediction 293 332 - -
Cpe18g00809 1612 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1611 - -
Cpe18g00809 1612 Gene3D Cysteine proteinases 1265 1612 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01519 Cpe18g00809 CCT
Cpe04g01519 Cpe18g00809 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00809 Cpe-Chr18:7543724 Cpe07g00714 Cpe-Chr7:6014731 1.42E-06 dispersed
Cpe18g00809 Cpe-Chr18:7543724 Cpe04g01519 Cpe-Chr4:11964174 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00809 - - mcha:111007268 2561.18