Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00823 | ATGGCGGCGGTTCCCGGCGAACTTGTTGGGGTTTCTGAGGATGATTTGAAACAGAGTGGTTTGACCCAGATTCATGTTCTTGCTGTTGATGATAGCCTCGTTGATCGGAAGGTTATTGAGCGGTTGCTGAAGATCTCGTCTTGTAAAGTGACTGCTGTTGAGAGTGGGAGAAGTGCTCTTCAATATCTGGGTTTGGATGGGGAAACCAATTCTGTCCGGTTTAGTGATTTGAAGGTGAATCTCATCATCACAGATTATTCCATGCCTGAAATGAATGGATATGAACTGCTGAAGAAGATCAAGGAATCATCGGCTCTCCGGGAGATTCCTGTTGTGATAATGTCATCGGAGAATATTATGGGTCGAATAGAGAATTGCTTGAAGGAAGGGGCTGAGGAGTTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGACTGAGAGACTGCTTCATTATGGAAGGAGAAAATGGAGGGAAGAAGATGAGTCATAAGAGGAAGCTTCGTGTTGATGATCATGATCACCACTTCTTGACTCCTGGGTCTCCGCCGCCGCCGCCGCCGATGGTGGGTTTCGACCATTGCCAAGGGTATCTGCACCGAATCACATGTTCGTCAAAGAAACCAAGGTTCCTCAATGGCGACCAGTTCACGTAA | 657 | 46.73 | MAAVPGELVGVSEDDLKQSGLTQIHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGETNSVRFSDLKVNLIITDYSMPEMNGYELLKKIKESSALREIPVVIMSSENIMGRIENCLKEGAEEFIVKPVKLSDVKRLRDCFIMEGENGGKKMSHKRKLRVDDHDHHFLTPGSPPPPPPMVGFDHCQGYLHRITCSSKKPRFLNGDQFT | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 7635924 | 7637453 | - | Cp4.1LG18g08270.1 | Cpe18g00823 | 485284 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00823 | 218 | Gene3D | - | 24 | 173 | - | - | |
Cpe18g00823 | 218 | ProSiteProfiles | Response regulatory domain profile. | 25 | 152 | IPR001789 | GO:0000160 | |
Cpe18g00823 | 218 | SUPERFAMILY | CheY-like | 23 | 146 | IPR011006 | - | |
Cpe18g00823 | 218 | SMART | REC_2 | 24 | 148 | IPR001789 | GO:0000160 | |
Cpe18g00823 | 218 | CDD | REC_typeA_ARR | 26 | 147 | - | - | |
Cpe18g00823 | 218 | Pfam | Response regulator receiver domain | 26 | 144 | IPR001789 | GO:0000160 | |
Cpe18g00823 | 218 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 21 | 173 | IPR045279 | GO:0009736 | |
Cpe18g00823 | 218 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR6 | 21 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00267 | Cpe-Chr1:1524322 | Cpe18g00823 | Cpe-Chr18:7635924 | 1.00E-45 | dispersed | |
Cpe18g00823 | Cpe-Chr18:7635924 | Cpe19g00016 | Cpe-Chr19:135237 | 9.84E-34 | dispersed | |
Cpe13g00622 | Cpe-Chr13:5978830 | Cpe18g00823 | Cpe-Chr18:7635924 | 2.04E-12 | transposed | |
Cpe01g01415 | Cpe-Chr1:8503744 | Cpe18g00823 | Cpe-Chr18:7635924 | 9.79E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50926 | PF00072 | Response_reg | 1.30E-21 | CL0304 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00823 | K14492 | - | csv:101214143 | 280.796 |