Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00867 ATGGAACGACAACGGCGGCGGCGACGACGACGACCTCTGTTACTTCTACTTCAGCTCTGTATCTTCTTCATCCTTTTCTTTCCCTCTTACGCAGTTGATTTCCTCTTCAATTCGTTCACAAACGGCTCGAATGGCACCGACATCATTCTCATTAGCGACGCGAGGTTCGATTCCCCTGTAATTCGTCTCAATAATGACTCAAACCCAAATTCAATCGGGCGAGCTTTCTATCACACGAAGCTGATTATGAAACCCACTTCGAATTCAACTACGATCTCTTCTTTTTCAACTACTTTCGTGTTTTCAATTTTGCTGGAAGTCGCTACTAGTCCAGGCTTCGGTATGGCCTTCGTTCTTTCCAATTCCACTTCACCTCCCGACGTCATAGCGGGTCAATACTTCGGTCTCTTCACAAATTCCACTACCCATGTCGTTGCTCCGCTTCTCGCCGTTGAATTCGACACCGGTCGAAACACGGAGTTCAACGATCCCGATGATAGCCATATCGGAATCGATTTGAACAGTATGTTGTCGATAAAAACACAGACCGCTGGGTATTTTGACCATAGTGGAATTTTTGTTCCAATTCAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTTGATGGGTCCAATTTCGAAATCAATGTCACGATTGCCCCAATTGGAATTCCTCGTCCATCGAAACCCACTTTGAGTTTTAGGGATCCTGAAATAGCAAATTATGTATCGAATGAAATGTTTGTGGGATTTTCAGCGTCGAAGACAAAATGGGTTGAGGCGCAGAGGATTTTGGCTTGGAGTTTTAGTGACACTGGTGTTGCTAGAGAGATTAACAACACGAATTTCCCTGTGTTTATGAGAGCATCACCGCCGTCTTCCTTGTCGCCGGGATCTGTTGCCGGTATTGTAATCGGCAGTGTTGTGTTTGTGATCTTAATTGGATTTGTGGGGTTTTTGTATTGGCGAAAGAACAGAGCAAGTGAAGAAGATGATGAAATTGAGGATTGGGAGCTCGAATATTGGCCTCACAGATTCTCTAACGAGGAGCTTTCACAGGCCACTGATGGATTTTCGGATAAGAATCTGTTGGGTTCCGGTGGATTTGGAAGAGTATTCAAAGGAACTTTACCAAACAACACGGAAATCGCCGTGAAGTGCGTAAATCACGATTCAAAACAGGGGCTAAAGGAATTCATGGCGGAAATCTCGAGCATGGGTAGGCTTCAACATAAAAATCTAGTCCAAATGCGTGGATGGTGTCGAAAAGGCAATGAATTAATGTTGGTATACGATTACATGCCGAATGGAAGCCTTAATCGGTGGATTTTCGACAAACCCACAACGCTACTCGGCTGGAAACAGCGCCGCCGTGTGCTCGCTGACGTTGCAGAGGGTTTGAACTATCTCCACCATGGTTGGGACCAAGTGGTGATTCACAGAGACATAAAATCAAGCAACGTGTTAATGGATTCGGAAATGAGAGGCAGACTGGGCGATTTTGGGCTGGCAAAACTGTACCAACACGGCGAGACTCCAAATACCACGCGCGTCGTTGGGACCTTGGGGTATTTAGCGCCGGAGATTGCAACGGTGGCTACTCCGACGGCGGCTAGCGATGTGTATAGTTTTGGGGTTGTGATTCTTGAAGTAGCATGTGGGCGGCGACCGATTGAGATGGCAGTGGAGGAAGAAGAAATGGTACTTATAGATTGGGTGAGGGATCTTTACTCCGCCGGACGGTTGATTGCGGCGGCGGACTTGCGAATCAGAGAGGAGTATGAAACAGAGGAGATGGAGTTGATGTTGAAGCTTGGTTTAGCTTGTTGTCATCCAGACCCTGAACGGCGGCCGACAATGAGGGAGGTTGTGGCTGTTTTGATTGGAGAACAACAGACAGCTGAGTCAGTGGAACTTTTGTCGGGATTGTCCGGCGGCGCTGTTGATGGCAGTCCAGAAGTTTGA 1971 47.03 MERQRRRRRRRPLLLLLQLCIFFILFFPSYAVDFLFNSFTNGSNGTDIILISDARFDSPVIRLNNDSNPNSIGRAFYHTKLIMKPTSNSTTISSFSTTFVFSILLEVATSPGFGMAFVLSNSTSPPDVIAGQYFGLFTNSTTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSMLSIKTQTAGYFDHSGIFVPIQMRNGQNLRAWIEFDGSNFEINVTIAPIGIPRPSKPTLSFRDPEIANYVSNEMFVGFSASKTKWVEAQRILAWSFSDTGVAREINNTNFPVFMRASPPSSLSPGSVAGIVIGSVVFVILIGFVGFLYWRKNRASEEDDEIEDWELEYWPHRFSNEELSQATDGFSDKNLLGSGGFGRVFKGTLPNNTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWIFDKPTTLLGWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLMDSEMRGRLGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVILEVACGRRPIEMAVEEEEMVLIDWVRDLYSAGRLIAAADLRIREEYETEEMELMLKLGLACCHPDPERRPTMREVVAVLIGEQQTAESVELLSGLSGGAVDGSPEV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7950210 7952180 - Cp4.1LG18g08720.1 Cpe18g00867 485328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00867 656 Gene3D Phosphorylase Kinase; domain 1 323 435 - -
Cpe18g00867 656 PANTHER - 15 645 - -
Cpe18g00867 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Cpe18g00867 656 Pfam Legume lectin domain 32 284 IPR001220 GO:0030246
Cpe18g00867 656 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 15 645 - -
Cpe18g00867 656 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Cpe18g00867 656 Gene3D Transferase(Phosphotransferase) domain 1 436 643 - -
Cpe18g00867 656 Gene3D - 30 289 - -
Cpe18g00867 656 ProSiteProfiles Protein kinase domain profile. 360 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00867 656 SMART serkin_6 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00867 656 CDD STKc_IRAK 366 629 - -
Cpe18g00867 656 Pfam Protein kinase domain 361 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe18g00867 656 CDD lectin_legume_LecRK_Arcelin_ConA 32 275 IPR001220 GO:0030246
Cpe18g00867 656 SUPERFAMILY Protein kinase-like (PK-like) 338 629 IPR011009 -
Cpe18g00867 656 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Cpe18g00867 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 289 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00867 Cpe-Chr18:7950210 Cpe20g00435 Cpe-Chr20:2503213 2.12E-169 dispersed
Cpe18g00867 Cpe-Chr18:7950210 Cpe10g00899 Cpe-Chr10:5048944 1.93E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63007 PF00069 Pkinase 9.30E-52 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00867 - - cmo:103502376 1107.05