Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe18g00870 | ATGAGGGACTCTTCCCTTTTCCCTCCTCGACGTATTGGTTATCCAAGTTTTCGATTGATTTCTGGGGCGGCTTTTGAGGATTTGTTGCAAGAAATTCTACATGTTTCTGACCTGTCTGTGTTCTTCTTGCTGTACTTGAAATCTCGGTATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGCTGAAGAGGTTGTAAAGAAAGAAGCTCGGTTTGCTCGGGAGGTTGCAATGTTGTCTAAAGTGCAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACGGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGTCCACGGTGCTTGGACACACGCGTGGCTGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTTCACTCCCATGGCATCATTCATCGTGATCTGAAACCTGAGAACCTTCTGTTGACTGCAGATCACAAGACAGTTAAATTAGCTGATTTTGGCTTGGCAAGAGAAGAGTCGTTGACAGAGATGATGACGGCGGAGACGGGGACCTACCGATGGATGGCTCCAGAGAATGTAAGGCCTAGCGCAGAGAATCTTCCTGAGGAACTGGCTATGGTTCTAACATCATGCTGGCAGGAGGATGCAAATGCTCGTCCTAATTTCTCCCAAATTATTCAAATGCTACTCAATTACCTTTACACTATTTCACCCCCCGAGCCGATGATTGCTTCCCGATTTTTCTCTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGTTCACTGATGGCAGTCCGTGATGATTCAGGTGACACTCCGAAAGCTAAAACGGAAAATAATCCCAGAGGTTGTTTCTCCTGCTCCTATGACTGTTTCTAA | 915 | 45.46 | MRDSSLFPPRRIGYPSFRLISGAAFEDLLQEILHVSDLSVFFLLYLKSRYKNQTVAIKIVHKGETAEEVVKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPENVRPSAENLPEELAMVLTSCWQEDANARPNFSQIIQMLLNYLYTISPPEPMIASRFFSSENTVFPPESPGTSSLMAVRDDSGDTPKAKTENNPRGCFSCSYDCF | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 7964351 | 7970242 | + | Cp4.1LG18g08640.1 | Cpe18g00870 | 485331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe18g00870 | 304 | MobiDBLite | consensus disorder prediction | 267 | 290 | - | - | |
Cpe18g00870 | 304 | SMART | serkin_6 | 41 | 242 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00870 | 304 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 48 | 200 | - | - | |
Cpe18g00870 | 304 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 201 | 279 | - | - | |
Cpe18g00870 | 304 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 151 | 163 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe18g00870 | 304 | SUPERFAMILY | Protein kinase-like (PK-like) | 49 | 266 | IPR011009 | - | |
Cpe18g00870 | 304 | Gene3D | Transferase(Phosphotransferase) domain 1 | 39 | 250 | - | - | |
Cpe18g00870 | 304 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 48 | 200 | - | - | |
Cpe18g00870 | 304 | Pfam | Protein kinase domain | 48 | 203 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe18g00870 | 304 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 201 | 279 | - | - | |
Cpe18g00870 | 304 | ProSiteProfiles | Protein kinase domain profile. | 14 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe18g00870 | Cpe-Chr18:7964351 | Cpe19g00798 | Cpe-Chr19:6021387 | 2.04E-56 | dispersed | |
Cpe01g02327 | Cpe-Chr1:19575002 | Cpe18g00870 | Cpe-Chr18:7964351 | 1.01E-134 | wgd | |
Cpe18g00870 | Cpe-Chr18:7964351 | Cpe03g00588 | Cpe-Chr3:3541980 | 7.39E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63008 | PF00069 | Pkinase | 4.30E-36 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe18g00870 | - | - | csv:101223021 | 464.922 |