Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00884 ATGAAGAAAGCAACAACAGGCAGCATCGTTCTTCTTTTAGCTTTGCTTTCTCTTCAGGACTTTGTTCATTTTGCATTGGCGCTACCTGTTTCAGAGAGTAATCAGGACGAGGAGCAATCTGCAACTACGAGACCTCTCGAGCAAGACAAAGAGCATTTTGAGGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTATTGAGAAGGAGAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAATGATCTCTTCAGGGATCAGGAGCAGCACAAGATTCATTTTGATATAAATCATTGGCAGTGTGGATACTGTCGCAAAAGCTTTCGGGCGGAAAAATTTCTTGATAAGCATTTCGACAACAGACATTACGATCTTCTGAATGTTAGTCACGGGAAGTGCTTAGCTGATTTATGTGGGGCTTTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAAGCCTGCAGCTGCAGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATACTTGTTTTCCAATTAATGAGGGACCATCAGCAAGCCGTCTTCATGAGCTATTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGAGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCAATTTTCTATGTCATTGTCTATTTGCACCGCAGAGAATCGAGAAACGGAATCGAAGTGCTTAGAAGAATCTCAAAGGCTGGACGTAAAACCAAACCCTTGTAA 840 41.79 MKKATTGSIVLLLALLSLQDFVHFALALPVSESNQDEEQSATTRPLEQDKEHFEEVHCSRERSRTAWNILEEHLLPFIEKENYQVSTKCRLHPNNDLFRDQEQHKIHFDINHWQCGYCRKSFRAEKFLDKHFDNRHYDLLNVSHGKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADTCFPINEGPSASRLHELFLHQFCGAHSCTEKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRKTKPL 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8015177 8023045 - Cp4.1LG18g08920.1 Cpe18g00884 485345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00884 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Cpe18g00884 279 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 278 - -
Cpe18g00884 279 PANTHER ZINC FINGER PROTEIN-RELATED 17 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00884 Cpe-Chr18:8015177 Cpe03g00604 Cpe-Chr3:3625746 4.70E-100 wgd
Cpe18g00884 Cpe-Chr18:8015177 Cpe04g00511 Cpe-Chr4:5639999 4.87E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50934 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00884 - - csv:101218367 513.457