Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00897 ATGCAACTCATCTACTTCGCCCTCTCCCTCTTCTTCCTTCTATCACTCTCTTCCACGGCCTTCTTCTGTCTCTATCTCTCCTTCTTTAAATTCTACTGCTTCTCCAAAAACCGCTTTTATTCCCCTCCGTCATACCCTCTCATCGGCTGCTTGATCTCTTTTTACAAAAACCGGCGCCGCCTTCTAAGCTGGTACACCCACCTCCTTTCCCACTCTCCCACTCAGACCATTGTGGTGAATCGCCTTGGTTCGAGGCGGACCGTTGTCACCGCCAACCCCGCCAACGTCGAGCACATGCTCAAGACCAATTTTGTTAACTACCCTAAAGGGAAGCCGTTTACTGATATACTCGGCGATCTCCTCGGCTGTGGCATTTTCAATGTCGACGGCGATTTATGGTCCACCCAACGCAAGCTTGCTAGCCATGAATTTTCCGCTAAGTCTGTTAGGGAATTCGTCGTTAAGACACTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCCATAACGCTGCTCGAACTAACGCCGTCCTCGATTTGCAAGATGTCTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTGACTGTAGGTACAGATGAGCAGTGCTTGGACATGTCGCGCCCAGTACCGGCAATAGTAAATTCATTGGACACGGCAACTGGGATCAGCGCAAGGAGGGCAGTAGCGCCACTTTTTGTCACGTGGAAGGCCAAGCGCATGCTCAACGTCGGCTCCGAAAAGAAGCTCAAAGAAGCGGTGGAAATGGTCCATGAATGGGTCTCCAACATCATTCATAACAGAAACCTGAACAATAGTAATACGCTCGATCATAACCACACACACGGCGATTTGTTATCTCGCCTCTTGTCGGCCGGCCACAGCCAGGAAGTGGTTAGAGACATGGTCGTCAGCTTCATAATGGCCGGCCGTGACACTACCTCCGCCGCCATGACGTGGCTTTTCTGGTTGCTCACTAAGCACCCCAAAGTCGAACAGGCCATAGTGGACGAAGCCATTAAATTGTCTGGCGATTCCGAAACTGCGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAGGCGTGTTTATGTGAGTCCATGCGGCTATACCCGCCGGTGGCTTGGGATTCGAAGCACGCAGCGGCGCCGGATATCCTGCCGGATGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTATGGAATGGGGCGGATGGAGGAGCTGTGGGGGAAGGACCGACTCGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAACCGGTGAGTCCGTTCAAGTTCCCGGTGTTTCAAGCCGGTCCAAGGATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGATGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCGGCGAATGAAAATGCGCCGGTTTTTGTCCCCTTGTTGACAGCTCATATGGCTGGTGGACTGAAGGTTTATGTGGGGGAAAGGAAAGAACAAAAGTCAACCATC 1539 50.88 MQLIYFALSLFFLLSLSSTAFFCLYLSFFKFYCFSKNRFYSPPSYPLIGCLISFYKNRRRLLSWYTHLLSHSPTQTIVVNRLGSRRTVVTANPANVEHMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHEFSAKSVREFVVKTLEDEVHLRLIPLLHNAARTNAVLDLQDVLGRLAFDTVCKVTVGTDEQCLDMSRPVPAIVNSLDTATGISARRAVAPLFVTWKAKRMLNVGSEKKLKEAVEMVHEWVSNIIHNRNLNNSNTLDHNHTHGDLLSRLLSAGHSQEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKVEQAIVDEAIKLSGDSETASLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAPDILPDGTPVRKGDRVTYFPYGMGRMEELWGKDRLEFKPDRWFQNGELKPVSPFKFPVFQAGPRMCLGKEMAFIQMKYVMATVLKRFEFRPANENAPVFVPLLTAHMAGGLKVYVGERKEQKSTI 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8079669 8081475 - Cp4.1LG18g08940.1 Cpe18g00897 485358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00897 513 SUPERFAMILY Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PANTHER CYTOCHROME P450 21 504 - -
Cpe18g00897 513 PANTHER CYTOCHROME P450 94B3 21 504 - -
Cpe18g00897 513 Gene3D Cytochrome P450 25 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 Pfam Cytochrome P450 42 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe18g00897 513 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00048 Cpe-Chr5:255317 Cpe18g00897 Cpe-Chr18:8079669 2.09E-151 dispersed
Cpe08g01337 Cpe-Chr8:9644553 Cpe18g00897 Cpe-Chr18:8079669 5.86E-141 dispersed
Cpe08g01025 Cpe-Chr8:7868850 Cpe18g00897 Cpe-Chr18:8079669 2.21E-141 transposed
Cpe20g00706 Cpe-Chr20:5867387 Cpe18g00897 Cpe-Chr18:8079669 6.60E-143 transposed
Cpe18g00897 Cpe-Chr18:8079669 Cpe03g00622 Cpe-Chr3:3717285 0 wgd
Cpe18g00897 Cpe-Chr18:8079669 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
Cpe18g00897 Cpe-Chr18:8079669 Cpe04g00490 Cpe-Chr4:5518571 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00897 K20665 - csv:101202989 827.009