Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00900 ATGGCCGCCACCAACACCAATGTCGCCACCGCCGTCGACGACCGCGTCTTGGCCACTGCGCAGCAGATCGTCAAGAGCCTCAATACCCCTAAAGAGGTTCGTGAGGACATGCTCTTGATTCTCTCCAATTTCGATAATCGCCTTTCCAGTATCGGTAGTATGATCAACAGTGACAACAACTCCAACACCGAGAACGATAGGTTGGATGCTGCTGAGAAGGTGATTCTACGTTGGGATCCTAATTCAGATGTACCGAGACCGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAATATTTATCTGCGGTGGATGATATACTCCGGCTAGTTGAAGGCCTGTCAATTGGGTCCGAGTCGACCAAGATCGTTGCCCGGGCGGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGAGCGAATTTCGCCATATCCTGATCCAGAGCACAGTTCCTCTCGACGCCGATCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCATTTGCGTCCCATTACAGTGAAATTGACGACGAATTCGAGAGTTTCGGCGAGGAAAGTCGCAATTCCGGGCGATTCCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCCGATGCGGCTGTTGATCTCTCGGAAATTGCGGACCGTATGATTCGCTCTGGCTACGAAAAGGAGTGTGTTCAAGTCTACAGCACCGTTCGTCGCGATGCTTTGGACGAGTGTTTGGCAATTCTTGGCGTCGAACGGCTCAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTCTAGACGAGAAGATGAAGAAATGGATCCAGGCCGTCAAAATTACTGTCCGGTTGATTTTGGTCGGTGAGAAGAGGCTCTGTGACCAGATTTTTAGTGGCGCCAATGAATCCCAGGAGATTTGTTTTAACGAAACAGCAAAAGGGTGTGTAATGCAGCTGCTAAATTTCGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGCTGTTCCGAATCTTGGATATGTATGACGCTCTGGCTGGCGTTTTGCCACACTTGGAAGCCATGGTTTCCGATGAGTTTCTGATCGGTGAAGTACACGGAGTATTGTCTGGACTGGGAGAAGCAGCCACGGGAACTTTTGTGGAGTTTGAGAACGCTATTCTTAGCGAAAATTCAAAGAAAGCAATGCAAAATGCCGATATTCACCCGCTCATTCGATATGTAATGAATTATGTTAGGCTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTTTAGAAGATGAGGAAGAACAAGACATGCCAAATGAGAAGGATAACGATGATATACTGCAGTTGGAAAGCACGTCGCCTTTGGCTCGTCGATTGTTCATGTTGTTATCGTCTCTGGAGTCCAATCTTGTGGAGAAATCTAAATTTTATGAGGATGTTTCTATGCAGTTCATATTCCTAATGAACAATATACTGTACATAGTGAAAAAGGTGAAAGATTCTGAGCTTGCCCAGCTGCTTGGCGATAACTGGCTTCGCAGGCGTAGCGGCCAAATTCGCCAATATGAAACTAGTTACCTTAGAGCCTCTTGGAGCAAAGTCTTGTCTTGCTTAAAGGATGAAGGCATTGGTGGGAGCCCAAGCAACGCCTCCAAGGTAGCTTTGAAGGAGAAGTTCAAGAATTTCAATGCAGGTTTTGAGGAAATCTGCAGGGTTCAAACAGCTTGGAAGGTGTCGGATACTCAACTGCGCGATGAGCTGATCATATCGGTTTCGGAGAAGGTGATTCCTGCGTACCGCTCCTTCTTAGGAAGGTTTAGAAATCAGTTAGAGAGCGGAAGGCATTCTGGGAAGTACATAAAGTACACGCCAGAGGATTTAGAGAACTATCTGTCAGATTTGTTTGAAGGATCACTTGCTGTATCACATCACTTGCGAAGAAAGAGTACTTGA 1959 47.58 MAATNTNVATAVDDRVLATAQQIVKSLNTPKEVREDMLLILSNFDNRLSSIGSMINSDNNSNTENDRLDAAEKVILRWDPNSDVPRPSLNWEDSPDEAAEYLSAVDDILRLVEGLSIGSESTKIVARAENAIQMAMCRLESEFRHILIQSTVPLDADRLYGSIRRVHLSFASHYSEIDDEFESFGEESRNSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILVGEKRLCDQIFSGANESQEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPHLEAMVSDEFLIGEVHGVLSGLGEAATGTFVEFENAILSENSKKAMQNADIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEEQDMPNEKDNDDILQLESTSPLARRLFMLLSSLESNLVEKSKFYEDVSMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRRSGQIRQYETSYLRASWSKVLSCLKDEGIGGSPSNASKVALKEKFKNFNAGFEEICRVQTAWKVSDTQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENYLSDLFEGSLAVSHHLRRKST 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8087530 8089488 - Cp4.1LG18g09000.1 Cpe18g00900 485361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00900 652 Pfam Exo70 exocyst complex subunit 276 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe18g00900 652 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 49 651 - -
Cpe18g00900 652 SUPERFAMILY Cullin repeat-like 69 638 IPR016159 -
Cpe18g00900 652 Gene3D Exocyst complex component Exo70 87 645 - -
Cpe18g00900 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 651 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00582 Cpe-Chr16:6587972 Cpe18g00900 Cpe-Chr18:8087530 5.87E-92 dispersed
Cpe18g00900 Cpe-Chr18:8087530 Cpe20g00075 Cpe-Chr20:397470 2.18E-125 dispersed
Cpe02g01373 Cpe-Chr2:12084757 Cpe18g00900 Cpe-Chr18:8087530 2.33E-144 transposed
Cpe18g00900 Cpe-Chr18:8087530 Cpe20g00308 Cpe-Chr20:1732404 0 wgd
Cpe18g00900 Cpe-Chr18:8087530 Cpe04g01614 Cpe-Chr4:12537686 0 wgd
Cpe18g00900 Cpe-Chr18:8087530 Cpe09g00962 Cpe-Chr9:8594080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00900 K07195 - csv:101205970 1119.38