Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00933 ATGGCTCTGTCGAAAGATGGGCAACGACAACCTCTGGTGCCAAGCTTTGTGTATTCTGCTAATTGGGGGATTTCCCAAACAGTGGTTAGGACGACGCCGGCATGGAGTTACGGCAGGAGCTTCCCAATTGAAGCTCCGAAAGAGAAGATAAAGATGTATTCACCGCCCTTCTACGCCGCTTGTACAGTAGGCGGCATTTTGAGTTGTGGACTCACCCACATGACTGTCACCCCCCTCGACCTCGTCAAGTGCAATATGCAGATCGACCCTGCAAAGTACAAGAACATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAGAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGGGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATAGTTGGAGCAGAGAATGCAGCCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTAATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGCGTCCAAACGCAACCTGGTTTTGCTCGGGGGTTGTCAGATGGGCTCCCAAAGTTTGTCAAGTCTGAGGGTGTTCTTGGGCTCTATAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCGTATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTGTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGTGGATATGTGGCCGGCGTCCTCTGTGCCGTAGTCTCACACCCGGCTGATAATCTCGTCTCTTTTCTCAACAACGCAAAGGGCGCAACCGCCGGGGATGCTGTGAGGCAGCTGGGCTTATGGGGTCTTTTCACTCGAGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGCCAACAACGGGTGGAGCTGCTCCTGCTCCTGCCGCTAACAAGTGA 1053 50.62 MALSKDGQRQPLVPSFVYSANWGISQTVVRTTPAWSYGRSFPIEAPKEKIKMYSPPFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIVGAENAAKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGAAPAPAANK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8237124 8238820 - Cp4.1LG18g09460.1 Cpe18g00933 485394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00933 350 SUPERFAMILY Mitochondrial carrier 58 329 IPR023395 -
Cpe18g00933 350 Pfam Mitochondrial carrier protein 59 142 IPR018108 -
Cpe18g00933 350 Pfam Mitochondrial carrier protein 154 241 IPR018108 -
Cpe18g00933 350 PANTHER PHOSPHATE TRANSPORTER 6 349 - -
Cpe18g00933 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 140 IPR018108 -
Cpe18g00933 350 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 349 IPR044677 GO:0005315|GO:1990547
Cpe18g00933 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 237 IPR018108 -
Cpe18g00933 350 Gene3D Mitochondrial carrier domain 58 334 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01926 Cpe-Chr1:16408764 Cpe18g00933 Cpe-Chr18:8237124 0 dispersed
Cpe04g00636 Cpe-Chr4:6566803 Cpe18g00933 Cpe-Chr18:8237124 1.06E-88 dispersed
Cpe13g00493 Cpe-Chr13:5069505 Cpe18g00933 Cpe-Chr18:8237124 0 dispersed
Cpe18g00933 Cpe-Chr18:8237124 Cpe10g00914 Cpe-Chr10:5103134 4.77E-10 dispersed
Cpe18g00933 Cpe-Chr18:8237124 Cpe03g00655 Cpe-Chr3:3901479 2.70E-19 wgd
Cpe18g00933 Cpe-Chr18:8237124 Cpe04g00457 Cpe-Chr4:5276761 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00933 K15102 - csv:101220423 602.053