Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe18g00937 ATGGAAAAACACCATCATCTTCAACATCAGGATATCAAGGACGAACCCAAGGACCTCGATTTGGATCTCGGATCCGACGAGCCTGACCTTACCCCTCTCCCCCTCACCGTTACTTCCCGGGTACTGCACATGTTGGGAGACATCGCAGCAGGTCCAGCTTATAGGTTTTCCCAATGGCTTGAACTCGTCCGTAAACGTAGCGGCAAACATCGCGCTTCTGGCTTCCACAACCGCCCTCATCCACCCTTCGATATGCCTTTCGGTGCTGAGCAACTTTTCAATGAATCAATAAGTCTTCCAGCTCCCGAGCACTCAACTGAAACGAATTTGTGGGATAGACTCGCTAAAGCCTCGATGTTGGATATTGAGTCGAGCTCTTTTTCGTGGGATAGGCTACTGTCTCTTCACCGCACCGAACACAGTAGTAGCACTGAACAATCGGAGGATGAGATGAATAAAGCCCTTGAGGCTAGAGTTATTCATAATTCCAGCACGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATATTGCCTGTTTGGAAGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTCCTGATGAGGTCACTTCATTCCATTCGGAATTGCAGTATGTTAGGTGGTCTCAATTTGAAAGGAAATGCCAAGACTATGGTTAAATGCAGTCAGAGCAATTTGATTGGTTTTGTTATGAAATTATGTTTTCCTCCTTCACAAAAGCTGGTGCCTTATTCGTGCAGCTATGTGCATGGATCTCCATTGTTAGAAATCTCAAGTGCATTTGAATCCCGAGAAAGGGCTGAAAAATTAGCCGCCGCTATTGGAAGGATCTTGCTATTGGACCTTGTCATCAGAAATGAAGATCGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCTGCAAATTTGCTTTTGGCTGATAGAATGGCGTGTCCCAATTTGAATGCATTTGAGGAAGCCTTTGATTCTGCCATTAAACGGTACAGACCAAAAGTCATTTCAACGCTTCAAAAAGAAAGAAGGGGAACTTCAATGGACAATCGACCAAGTTCTAGTTCAGGGTTGGTTTCAGAGACCTCTGAACTTTCTGATAATGTTGAATCCCCAAAATCTAGTAACCTAAGTGTTAAAAGTCAAATATCAGATGAAGTAATGCTTTGTGATTTTAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGTCCTCCTGCTGGAAAACGTGCTAATGACCAGTCAATTTACCCAAAATTAGTTGAGTTGTTACTCAACAGTTCCGAGTTCTCCTCTAATCTATTGCATGACATTACGGGAGGGAAATTAGGGTTCCCTTCATTAGCTGATGCCAACTTAACTTCTGGCATACAGCTTACAGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACCCTTCACCAAAAGTTAGACAACTCATTACGAGCATTCATGAATATCATAAATAAATTTCCCTTGGGGGAATCCGATAAAGAGGACTCGGGGGTTCCTGAGTCCCATTTGCAGGCTTCTACCACTATTCATTGTTTATCTCCACGGGGTAAGGAACGAGTCTCCAGTGACGGTAATATAGATGTTACAGAGTCAGCTCCAAGATCATCATCGTCAGGAAATAGAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAGCTCACAAGGAAAGTTACACAGGGGAGGTGCAGAGCCCATTCATAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGTTGAAGAATGAAGCTGTTAAACTCTGCCAGGAGAATAAATTTAATACTGGGTTTTTTGAGGGCAGCGATAGTCATGGAGTTGTGGATGCTTATGAATTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCTGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACACCTGCCTTGTTTATAGGTGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTTACTCATATTTTATGTCTCTGCTCCAATGAAATTGGGCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAGAACTTTTCAATAAGTGACAATGAAGACTCAAACATCAGCAGTATCTTTGAGGAAGCTTCTGATTTTGTTGATGACGTTGAAAGAAAGGGTGGGAAGGTCCTGGTTCACTGTTTTGAAGGGAAAAGCAGAAGTGCCACATTAGTTCTTGCTTACTTGATGCTCAGAAAGAAATACACACTGCTAAAAGCATGGAATGCTTTGAAACGAGTTCACCGTCGAGCTCAGCCTAATGATGGGTTTGCTAAAACTTTGTTAGAATTAGATCGAAGAATACATGGAAAAGTTTCCATGGAGTGGCAGTCACGAAAACCAACTATGAAAGTCTGCCCAATTTGTGGGAAAAATGCTGGACTGAGCAGTAGCTCACTGAAACTTCATCTGCAAAAATCACACAAGAAGCTATCATCTGGGAGCGTAGACAGTGCAATGACCATGGAAATACAGAAAGCACTAACAGCTCTGAAAATCAGTCGTGGCGGAAGCGTGAGCCCAACCCAGAGGCAATCTCTTCTGATCTTAGATGAATAG 2751 42.93 MEKHHHLQHQDIKDEPKDLDLDLGSDEPDLTPLPLTVTSRVLHMLGDIAAGPAYRFSQWLELVRKRSGKHRASGFHNRPHPPFDMPFGAEQLFNESISLPAPEHSTETNLWDRLAKASMLDIESSSFSWDRLLSLHRTEHSSSTEQSEDEMNKALEARVIHNSSTEWLQIKEAAEKARDIACLEGDEVGEMTCSELLEALEFSRCLFLMRSLHSIRNCSMLGGLNLKGNAKTMVKCSQSNLIGFVMKLCFPPSQKLVPYSCSYVHGSPLLEISSAFESRERAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLLADRMACPNLNAFEEAFDSAIKRYRPKVISTLQKERRGTSMDNRPSSSSGLVSETSELSDNVESPKSSNLSVKSQISDEVMLCDFNIVAIDSGVPRRPPAGKRANDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADANLTSGIQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDSGVPESHLQASTTIHCLSPRGKERVSSDGNIDVTESAPRSSSSGNRESSDLSSPLSRDSSQGKLHRGGAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTPALFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSISDNEDSNISSIFEEASDFVDDVERKGGKVLVHCFEGKSRSATLVLAYLMLRKKYTLLKAWNALKRVHRRAQPNDGFAKTLLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQSLLILDE 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8248876 8259980 + Cp4.1LG18g09330.1 Cpe18g00937 485398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe18g00937 916 ProSitePatterns Tyrosine specific protein phosphatases active site. 776 786 IPR016130 GO:0016311|GO:0016791
Cpe18g00937 916 MobiDBLite consensus disorder prediction 362 390 - -
Cpe18g00937 916 CDD DSP 690 827 - -
Cpe18g00937 916 ProSiteProfiles Dual specificity protein phosphatase domain profile. 689 834 IPR020422 GO:0006470|GO:0008138
Cpe18g00937 916 MobiDBLite consensus disorder prediction 560 590 - -
Cpe18g00937 916 MobiDBLite consensus disorder prediction 352 390 - -
Cpe18g00937 916 Gene3D - 267 517 IPR036940 GO:0016301
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 156 214 IPR035010 GO:0004721|GO:0009737|GO:0043622
Cpe18g00937 916 Pfam Dual specificity phosphatase, catalytic domain 705 830 IPR000340 GO:0008138|GO:0016311
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 13 156 - -
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 261 915 - -
Cpe18g00937 916 SUPERFAMILY Protein kinase-like (PK-like) 58 213 IPR011009 -
Cpe18g00937 916 MobiDBLite consensus disorder prediction 1 30 - -
Cpe18g00937 916 MobiDBLite consensus disorder prediction 526 599 - -
Cpe18g00937 916 SUPERFAMILY Protein kinase-like (PK-like) 262 427 IPR011009 -
Cpe18g00937 916 Pfam Actin-fragmin kinase, catalytic 262 414 IPR015275 -
Cpe18g00937 916 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 689 833 IPR029021 -
Cpe18g00937 916 Gene3D Protein tyrosine phosphatase superfamily 667 835 IPR029021 -
Cpe18g00937 916 MobiDBLite consensus disorder prediction 1 24 - -
Cpe18g00937 916 SMART dsp_5 689 831 IPR020422 GO:0006470|GO:0008138
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 13 156 IPR035010 GO:0004721|GO:0009737|GO:0043622
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 261 915 IPR035010 GO:0004721|GO:0009737|GO:0043622
Cpe18g00937 916 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 156 214 - -
Cpe18g00937 916 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 754 810 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01575 Cpe-Chr1:9430635 Cpe18g00937 Cpe-Chr18:8248876 3.63E-18 dispersed
Cpe09g00547 Cpe-Chr9:3670758 Cpe18g00937 Cpe-Chr18:8248876 2.06E-19 dispersed
Cpe17g00126 Cpe-Chr17:803684 Cpe18g00937 Cpe-Chr18:8248876 3.89E-19 dispersed
Cpe18g00937 Cpe-Chr18:8248876 Cpe01g01110 Cpe-Chr1:6560631 2.65E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe18g00937 K14165 - csv:101220184 1446.8