Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00058 | ATGGGAACTCCGGAATTCCCTAATCTTGGAAAGCATTGCAGCTTTGAAGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGTTGTCACCAGGTCTTCTGTTTGGAGCATCGTAGCTACAATAGGCATAGTTGTCCAAAAACTGATAGGCGTGATGTTACTGTTGTCATTTGTCCGCTCTGTGCCAAAGGAGTTCGTCTCATTCCCGATCAAGACCCGAACATTACGTGGGAGATTCACGTAAACACTGAATGTGATCCTTCAAATTATGATAAAGTCACAAAGAAGAAAAAGTGCCCAGTACCTGGCTGCAGGGAGTTGTTAACGTTTTCAAACACGATCAAGTGCCGGGATTGCTTGGTAGACCATTGTTTGAAGCACCGTTTTGGACCCGACCATAAGTGTTCGGGACCGAAAAAACCAGAACCAGCTGGTTTTCCATTTGTTGGTCTTCTAAGTCGAGGTAGAAAAGAAGAGAAAGGCCCTAAGAAAGCATTGCCCCCCACAACATCTTCCTCTAGTTGGACTACATCCCTCTTTAATGCAGCCTCATCTGTTAAAGCCTCAGCCGAGGCGAGCATGACGAAGTTGTCGAATGAAATCAATCACGCTTGGAAAACAAAAAGCAGCAGCAGCAGCAGCAACGGAAGTGCAAATGGACAAGTCGAGCAATGTCCACAATGTGGTGCTAAGTTTTCGTCAGTTTCATCGTTAATAGACCATGTCGAAAAAGTCCACGAAAAGGGTGGCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCGAAGTGTAGTAGAGGATTTGTTGATCCTGTTGCGCTCGTGGAGCATATCGAGAGGGAGCATGGTGGTACTTCAAGAGCTTGA | 879 | 45.85 | MGTPEFPNLGKHCSFEDCKQIDFLPFTCDCCHQVFCLEHRSYNRHSCPKTDRRDVTVVICPLCAKGVRLIPDQDPNITWEIHVNTECDPSNYDKVTKKKKCPVPGCRELLTFSNTIKCRDCLVDHCLKHRFGPDHKCSGPKKPEPAGFPFVGLLSRGRKEEKGPKKALPPTTSSSSWTTSLFNAASSVKASAEASMTKLSNEINHAWKTKSSSSSSNGSANGQVEQCPQCGAKFSSVSSLIDHVEKVHEKGGNRPGAKKVVIDACPKCSRGFVDPVALVEHIEREHGGTSRA | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 441424 | 443972 | - | Cp4.1LG19g00560.1 | Cpe19g00058 | 485466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00058 | 292 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Cpe19g00058 | 292 | ProSiteProfiles | Zinc finger AN1-type profile. | 7 | 55 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 263 | 291 | IPR013087 | - | |
Cpe19g00058 | 292 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 227 | 248 | IPR013087 | - | |
Cpe19g00058 | 292 | SMART | AN1_Zf_4 | 101 | 142 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | SMART | AN1_Zf_4 | 13 | 52 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | SUPERFAMILY | AN1-like Zinc finger | 93 | 143 | IPR035896 | - | |
Cpe19g00058 | 292 | Gene3D | Classic Zinc Finger | 189 | 291 | - | - | |
Cpe19g00058 | 292 | Gene3D | - | 81 | 147 | IPR035896 | - | |
Cpe19g00058 | 292 | SMART | c2h2final6 | 263 | 286 | IPR013087 | - | |
Cpe19g00058 | 292 | SMART | c2h2final6 | 225 | 248 | IPR013087 | - | |
Cpe19g00058 | 292 | SMART | c2h2final6 | 99 | 129 | IPR013087 | - | |
Cpe19g00058 | 292 | Pfam | C2H2-type zinc finger | 226 | 248 | - | - | |
Cpe19g00058 | 292 | ProSiteProfiles | Zinc finger AN1-type profile. | 95 | 145 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | Gene3D | - | 2 | 58 | IPR035896 | - | |
Cpe19g00058 | 292 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 225 | 248 | IPR013087 | - | |
Cpe19g00058 | 292 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 1 | 292 | - | - | |
Cpe19g00058 | 292 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 265 | 286 | IPR013087 | - | |
Cpe19g00058 | 292 | Pfam | AN1-like Zinc finger | 13 | 50 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | Pfam | AN1-like Zinc finger | 101 | 141 | IPR000058 | GO:0008270 | |
Cpe19g00058 | 292 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 1 | 292 | - | - | |
Cpe19g00058 | 292 | SUPERFAMILY | AN1-like Zinc finger | 6 | 50 | IPR035896 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00546 | Cpe-Chr3:3199642 | Cpe19g00058 | Cpe-Chr19:441424 | 2.50E-31 | transposed | |
Cpe10g01185 | Cpe-Chr10:8789436 | Cpe19g00058 | Cpe-Chr19:441424 | 1.28E-132 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50948 | PF01428 | zf-AN1 | 1.50E-07 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00058 | - | - | cmax:111466071 | 593.578 |