Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00068 CAGAAGACATCAAAATTTCAAAATCTCCCTTCATTCTCACTCCTCTCACTAACTCTCTGCAACTCCAACCTCCTCAACAATGGCGGATTCCAAACCCCTAATTTAACCACCAATCCAAAATCCCCAAAATCCCCAAAATGCCCTCCTCCTCCTCCTCCTCCTCCTCCCCATTTCCCTCCTTCCTCACCTTCTTCTCCTTCCTCATTTCCCTCTCTTCCTCTCTCAACTCCGATGGCCGCCATTGAAACCGACCCATCTCACCTCCTCGCCTCATGGTCCGACTCCGACTCCACCCCATGCCACTGGCCTGGAATCCTCTGCACCCGCGACCGAGTCACCCACCTCTCGCTTACCAACAAAGGCCTCACCGGCTACATCCCTTCCGAGCTCGGCCTCCTCGATTCCCTCCAGCGCCTCAGCCTCGCTTTCAACAATTTCTCTAAACCGATTCCGGTTCATCTCTACAACGCCACCAATCTCGTCTTCCTCGACCTCTCTCACAACTCCCTCTCCGGTCCGGTTTCGGATCAAATCGGCGAACTCAGGAATCTCCGGCATCTGGATTTATCCTCTAATTCCCTCAATGGGTCTCTCCCGAAGCGGCTGACGGAGTTGACCGAACTTGTCGGGACTCTCAATTTGTCCTACAATCAATTCTCCGGCGAGGTTCCGCCGTCGTTTGGGAACCTCCCGCTGATTGTGAATCTCGATGTTCGTCACAATAACCTCACCGGAAAGATTCCGCAGGTGGGTTCGTTGTTGAATCAAGGCCCGACGGCTTTCTCCGGCAACCCAAGTCTTTGTGGGTTTCCATTACAGACGCTATGTCCGGAAGCTCAGAACCCGAACGTTATCCCTGAGAATCCGCAGAATCCCAAGTCGTTGAACGGTAATTTTCAAGGATACGGCGGAGGGAGAGCTACAAGGGGGAGTGGCGCCGCTGCGACGGTGGCGGTGGTGTCGTCAATATTCGCGGTGATGGGGGTTGTGTCGCTGACGGTGTGGTGGTTCCGGAGGAAGGCGGAAGTGGGGAAGCGGGATGAGGGCAAATCGGGAAAGGGGAGTCCGGAGGAGAACAGTGAGGGGGATTTGGAAGGGCAAGATGGTAAATTCGTAGTGATCGATGAAGGGATGAATCTGGAATTAGAGGATTTGTTGAGGGCATCAGCGTACGTGGTGGGGAAGAGTAGGAGTGGGATAGTGTATAAGGTAGTGGCTGGGCGGGGATCAGGTGCGGCCGCGAGTATTGTAGCTGTAAGGAGACTTAACGATGGTGATGCCACGTTGACGTTCAAGGATTTTGAGTATGAGATGGAGTCCATCAGTAGGGTCCACCATCCCAACATCCTACGGTTGAGAGCTCATTACTATGCAAGTGATGAGAAATTGGTGGTCACTGATTTCATCAACAATGGAAGCTTGCACTCTGCCTTACATGGAGGCCCCTCCAGTTCTTTGTCACCTCTGCCATGGTCTGCAAGGTTAAAAATTGCCCAAGGAGCTGCAAGGGGTTTGGCATATATTCATGAATTCGGTGCTCGGAAGTACGTACACGGAAACATAAAATCGACGAAGATTCTTCTCGATGACGATCTCGAGCCTTACGTTTCAGGTTTCGGACTCGCTCGTCTCAGCCAAGGAGCATCCAAAAAGTTGAGCTCAAGCCAGAATATGATCACCACCTCAATCATGGGGCCAAGCATGACAACTCCCTCAGCAATGTACTTAGCGCCAGAGGTTCGTGAGTTTGGAGGGAAGTACACTCAGAAATGCGACGTCTATTCATTTGGTATTGTCCTCCTTGAGCTTTTGAGCGGTCGATCACCTAATGCAGGCTCGGAGACCGATGGGGGGAAGGGGTTGGAATGTTTTGTGAGGAAGGCGTTTCAAGAAGAGCGCCCCTTGACCGAGATTATAGACCCGGCACTCGTGCCGGAGATTTATGCCAAGAAACAAGTGGTTTCGACATTTCACATTGCGCTGAATTGCACAGAGCTTGATCCCGAGCTTCGTCCTCGAATGCGATCGCCACCGACTACCGCTGATCGATGCCTATATAGCCACCCGCGCAACGCCGACACCCATGATCCCAAAGGACATTCCAGTGTGAGGACAATGAGAAGTGTATCATCACTTGCAGCTCTCAAGTGGTGCACCACACAAACACTTATTATGAAAATACGAATAAACATCAAATCTCTGCAACTCTCCACCCTTTGGAATCTGACCACAAAGCCTATTGTAACTCACATTGAACGAGTTAAGATTACCGAGCTTCGTCATCTGCGGCGGCAAACCCCCATAGATCTTATTATGTTTGCTACGGTCCAATTGAAGAAATTCGAGACTTGGGAGCTTGGAGAGGGAGCTTGGGATGGCTCCGGAGAGATTGCTGAAGGAGAGGCGAATGTATGTGAGCTTGGAGAGGGAGCTGAGGAAGTCCGGGATGGTGCCGGAGATATTAGTCCAGCTGATATCGAGGTGTTTGAGGTTGTGGAGCTTGGCGATGGTGGGTTGGATGGGGCCAACGAGATTTGGGAGCTTGGATTGGAGGAATGGGAGGTCACCGATGTACGGCGGGATTTGGCCGGAGATTTCATTGTCGGTAGAGATGTCGAGGGAGATAATCCGAGTTCTGCAAATGAAATGGTGAAGAAGAGGAAGAAGAAGAGGAGAGGAAGAGGAGATTTGAGGGTGAGAACAAGCATGGTTGATGACAAGGGCTTAGATGCGTCGCCTTCAAGCTTGTTCCTTGACAAATCAATGGCGCTGAAGTCCACTTTGGAGAAGGAAGGTGGGATTTTGCCGGTAACTCGGGATGGCGCCGGAGAGATTGCTGAAGGAGAGGCTAATGTAGGAGAGGTTGGAGAGGGAGCTGAGGAAGTCCGGGATGGTGCCGGAGATTTTGGTCCAGCTTATGTCCAGGTGTTTGAGGTTGTGGAGTTTGGCGATGGCGGGTTGGATGGGGCCGACGAGATTTGGGAGCTTGTGGAAGGTGAGGTATTGGAGGTATGGGAGGTCGCCGACGTGCGGCGGGATTTGGCCGGAGATTTGTTTGTCGACGGAGATAGTGAGGGAGATGATGCGAGTTCTGCAAATGAAATGGTGAAGAAGATGAAGATGAGGAGGAGAGAGATGGTTGTTACGTCTATTCCAATAACGGTTGAGCAATATTCTCCTCTTCTCTTGGAAGTCGTGCAATTGCAGAAGATCATGAAGACTACAAAGTAG 3231 51.47 QKTSKFQNLPSFSLLSLTLCNSNLLNNGGFQTPNLTTNPKSPKSPKCPPPPPPPPPHFPPSSPSSPSSFPSLPLSTPMAAIETDPSHLLASWSDSDSTPCHWPGILCTRDRVTHLSLTNKGLTGYIPSELGLLDSLQRLSLAFNNFSKPIPVHLYNATNLVFLDLSHNSLSGPVSDQIGELRNLRHLDLSSNSLNGSLPKRLTELTELVGTLNLSYNQFSGEVPPSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTLCPEAQNPNVIPENPQNPKSLNGNFQGYGGGRATRGSGAAATVAVVSSIFAVMGVVSLTVWWFRRKAEVGKRDEGKSGKGSPEENSEGDLEGQDGKFVVIDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSGAAASIVAVRRLNDGDATLTFKDFEYEMESISRVHHPNILRLRAHYYASDEKLVVTDFINNGSLHSALHGGPSSSLSPLPWSARLKIAQGAARGLAYIHEFGARKYVHGNIKSTKILLDDDLEPYVSGFGLARLSQGASKKLSSSQNMITTSIMGPSMTTPSAMYLAPEVREFGGKYTQKCDVYSFGIVLLELLSGRSPNAGSETDGGKGLECFVRKAFQEERPLTEIIDPALVPEIYAKKQVVSTFHIALNCTELDPELRPRMRSPPTTADRCLYSHPRNADTHDPKGHSSVRTMRSVSSLAALKWCTTQTLIMKIRINIKSLQLSTLWNLTTKPIVTHIERVKITELRHLRRQTPIDLIMFATVQLKKFETWELGEGAWDGSGEIAEGEANVCELGEGAEEVRDGAGDISPADIEVFEVVELGDGGLDGANEIWELGLEEWEVTDVRRDLAGDFIVGRDVEGDNPSSANEMVKKRKKKRRGRGDLRVRTSMVDDKGLDASPSSLFLDKSMALKSTLEKEGGILPVTRDGAGEIAEGEANVGEVGEGAEEVRDGAGDFGPAYVQVFEVVEFGDGGLDGADEIWELVEGEVLEVWEVADVRRDLAGDLFVDGDSEGDDASSANEMVKKMKMRRREMVVTSIPITVEQYSPLLLEVVQLQKIMKTTK 1076
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 506271 522194 - Cp4.1LG19g00770.1 Cpe19g00068 485476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00068 1076 PRINTS Leucine-rich repeat signature 181 194 - -
Cpe19g00068 1076 PRINTS Leucine-rich repeat signature 160 173 - -
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 688 702 - -
Cpe19g00068 1076 Gene3D Phosphorylase Kinase; domain 1 371 468 - -
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 345 366 - -
Cpe19g00068 1076 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 76 683 - -
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 873 895 - -
Cpe19g00068 1076 Pfam Leucine Rich Repeat 183 199 IPR001611 GO:0005515
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 42 67 - -
Cpe19g00068 1076 SUPERFAMILY Protein kinase-like (PK-like) 392 675 IPR011009 -
Cpe19g00068 1076 Gene3D Ribonuclease Inhibitor 210 276 IPR032675 -
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 27 41 - -
Cpe19g00068 1076 Gene3D Transferase(Phosphotransferase) domain 1 469 690 - -
Cpe19g00068 1076 ProSiteProfiles Protein kinase domain profile. 387 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 670 703 - -
Cpe19g00068 1076 Pfam Leucine rich repeat N-terminal domain 82 107 IPR013210 -
Cpe19g00068 1076 Gene3D Ribonuclease Inhibitor 77 209 IPR032675 -
Cpe19g00068 1076 Pfam Protein tyrosine and serine/threonine kinase 393 626 IPR001245 GO:0004672|GO:0006468
Cpe19g00068 1076 MobiDBLite consensus disorder prediction 27 76 - -
Cpe19g00068 1076 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 76 683 - -
Cpe19g00068 1076 SUPERFAMILY L domain-like 83 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g00068 Cpe-Chr19:506271 Cpe01g01329 Cpe-Chr1:7998923 8.37E-131 dispersed
Cpe10g01174 Cpe-Chr10:8637226 Cpe19g00068 Cpe-Chr19:506271 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63013 PF07714 PK_Tyr_Ser-Thr 1.20E-26 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00068 - - csv:101212426 966.066